BLASTX nr result

ID: Bupleurum21_contig00024866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024866
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25860.3| unnamed protein product [Vitis vinifera]              220   4e-55
ref|XP_002269690.2| PREDICTED: uncharacterized protein LOC100253...   220   4e-55
ref|XP_002329945.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
ref|XP_002308735.1| predicted protein [Populus trichocarpa] gi|2...   213   6e-53
ref|XP_002525234.1| conserved hypothetical protein [Ricinus comm...   210   3e-52

>emb|CBI25860.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  220 bits (560), Expect = 4e-55
 Identities = 103/133 (77%), Positives = 115/133 (86%), Gaps = 1/133 (0%)
 Frame = -1

Query: 488 KNLCAICLDPLSYNTANSPGQAIFTAQCSHAFHFTCISSNVRHGGVTCPICRAHWTQLPR 309
           KNLCAICLDPLSY+T  SPG AIFTAQCSHAFHF CISSNVRHG VTCPICRAHWTQLPR
Sbjct: 72  KNLCAICLDPLSYSTGTSPGPAIFTAQCSHAFHFACISSNVRHGSVTCPICRAHWTQLPR 131

Query: 308 NL-IAPFSIATNQTDPILQILDESIASFRVHRRSFNRTAHYNDDDPIEHEHPLNHPRLHL 132
           NL   P S+A NQTDPIL+ILD+SIA+FRVHRRSF R+A Y+DDDPIE +H  NHPRLHL
Sbjct: 132 NLNPPPCSLAGNQTDPILRILDDSIANFRVHRRSFLRSARYDDDDPIEPDHSPNHPRLHL 191

Query: 131 TLVSVPLTHSSTH 93
           +L+ +PLTH + H
Sbjct: 192 SLIPLPLTHPTFH 204


>ref|XP_002269690.2| PREDICTED: uncharacterized protein LOC100253188 [Vitis vinifera]
           gi|147840889|emb|CAN66503.1| hypothetical protein
           VITISV_035496 [Vitis vinifera]
          Length = 523

 Score =  220 bits (560), Expect = 4e-55
 Identities = 103/133 (77%), Positives = 115/133 (86%), Gaps = 1/133 (0%)
 Frame = -1

Query: 488 KNLCAICLDPLSYNTANSPGQAIFTAQCSHAFHFTCISSNVRHGGVTCPICRAHWTQLPR 309
           KNLCAICLDPLSY+T  SPG AIFTAQCSHAFHF CISSNVRHG VTCPICRAHWTQLPR
Sbjct: 77  KNLCAICLDPLSYSTGTSPGPAIFTAQCSHAFHFACISSNVRHGSVTCPICRAHWTQLPR 136

Query: 308 NL-IAPFSIATNQTDPILQILDESIASFRVHRRSFNRTAHYNDDDPIEHEHPLNHPRLHL 132
           NL   P S+A NQTDPIL+ILD+SIA+FRVHRRSF R+A Y+DDDPIE +H  NHPRLHL
Sbjct: 137 NLNPPPCSLAGNQTDPILRILDDSIANFRVHRRSFLRSARYDDDDPIEPDHSPNHPRLHL 196

Query: 131 TLVSVPLTHSSTH 93
           +L+ +PLTH + H
Sbjct: 197 SLIPLPLTHPTFH 209


>ref|XP_002329945.1| predicted protein [Populus trichocarpa] gi|222871967|gb|EEF09098.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  218 bits (554), Expect = 2e-54
 Identities = 107/163 (65%), Positives = 122/163 (74%), Gaps = 3/163 (1%)
 Frame = -1

Query: 545 EHSGTMIDEMPNSTTSTPAKNLCAICLDPLSYNTANSPGQAIFTAQCSHAFHFTCISSNV 366
           E S T+I    N+  ++  KNLCAICLDPLSY+T NSPGQAIFTAQCSHAFHF CISSNV
Sbjct: 77  EESNTIISNTKNNNVAS--KNLCAICLDPLSYSTGNSPGQAIFTAQCSHAFHFACISSNV 134

Query: 365 RHGGVTCPICRAHWTQLPRNLIAPFSIATNQTDPILQILDESIASFRVHRRSFNRTAHYN 186
           RHG VTCPICRAHWTQLPRNL  P S++ N  DPI QILD+SIA+FRVHRRSF R+A Y+
Sbjct: 135 RHGSVTCPICRAHWTQLPRNLNIPCSLSCNHADPIFQILDDSIANFRVHRRSFLRSARYD 194

Query: 185 DDDPIEHEHPLNHPRLHLTLVSVPLT---HSSTHTCLHQIPLS 66
           DDDPIE +   NHPRL  +LV +PLT   H  T    H   L+
Sbjct: 195 DDDPIEPDQTPNHPRLDFSLVPIPLTIFHHPRTQHYQHHYNLT 237


>ref|XP_002308735.1| predicted protein [Populus trichocarpa] gi|222854711|gb|EEE92258.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score =  213 bits (541), Expect = 6e-53
 Identities = 101/146 (69%), Positives = 118/146 (80%)
 Frame = -1

Query: 545 EHSGTMIDEMPNSTTSTPAKNLCAICLDPLSYNTANSPGQAIFTAQCSHAFHFTCISSNV 366
           E S T+I    N+  ++  KNLCAICLDPLSY+T+NSPGQAIFTAQC HAFHF CISSNV
Sbjct: 79  EESNTIISNKNNNNVAS--KNLCAICLDPLSYSTSNSPGQAIFTAQCRHAFHFACISSNV 136

Query: 365 RHGGVTCPICRAHWTQLPRNLIAPFSIATNQTDPILQILDESIASFRVHRRSFNRTAHYN 186
           RHG VTCPICRA WTQLPRNL  P S++ NQTDPILQILD+SIA+FRVHR SF R+A Y+
Sbjct: 137 RHGSVTCPICRARWTQLPRNLNMPCSLSCNQTDPILQILDDSIANFRVHRHSFLRSARYD 196

Query: 185 DDDPIEHEHPLNHPRLHLTLVSVPLT 108
           DDDPIE +   N+PRL  ++V +PLT
Sbjct: 197 DDDPIEPDQTPNYPRLDFSIVPIPLT 222


>ref|XP_002525234.1| conserved hypothetical protein [Ricinus communis]
           gi|223535531|gb|EEF37200.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score =  210 bits (535), Expect = 3e-52
 Identities = 110/195 (56%), Positives = 130/195 (66%), Gaps = 10/195 (5%)
 Frame = -1

Query: 668 SNKLKWAVKKFFQTCAGTGDGPFSPTKPPPRVDPLPLTKV-----IEHSGTMIDEMPNST 504
           S+KL+ A +K       +     S  KP    D    +       I  S T + E  + T
Sbjct: 7   SSKLRKAARKMVVAACASFSSSSSSRKPALSFDNSSSSSFNGSDSIAMSPTKLKEAESLT 66

Query: 503 TST-----PAKNLCAICLDPLSYNTANSPGQAIFTAQCSHAFHFTCISSNVRHGGVTCPI 339
             T       +NLCAICL+ LSY+T NSPGQAIFTAQCSHAFHF CISSNVRHG VTCPI
Sbjct: 67  NDTYNNVASKQNLCAICLEALSYSTGNSPGQAIFTAQCSHAFHFACISSNVRHGSVTCPI 126

Query: 338 CRAHWTQLPRNLIAPFSIATNQTDPILQILDESIASFRVHRRSFNRTAHYNDDDPIEHEH 159
           CRAHWTQLPRNL  P S++ NQ+DPI QILD+SIA+FRVHRRSF R+A YNDDDPIE + 
Sbjct: 127 CRAHWTQLPRNLNPPCSLSCNQSDPIFQILDDSIATFRVHRRSFLRSARYNDDDPIEPDD 186

Query: 158 PLNHPRLHLTLVSVP 114
             +HPRL  +LVS+P
Sbjct: 187 TSSHPRLDFSLVSIP 201


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