BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024855
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   407   e-111
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   402   e-110
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   393   e-107
ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-107

>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  407 bits (1046), Expect = e-111
 Identities = 199/299 (66%), Positives = 238/299 (79%)
 Frame = +2

Query: 2   ALRAQSDPDLALDIFRWTAQQRRYKHNAQTYLTMLHISVSSRRYRQAETLVEEIIAGACP 181
           ALRAQSDPDLALDIFRWT QQR Y+HN  TYLTM+ I+VS +R+R AETL+EE+IAGAC 
Sbjct: 95  ALRAQSDPDLALDIFRWTGQQRGYRHNHVTYLTMIKIAVSGKRFRHAETLIEEVIAGAC- 153

Query: 182 DPTLALYNSVIKFCCGRKFLFNRAFDVYKKMWRSQDAKPSXXXXXXXXXXXXXKFNRLNV 361
             ++ LYNS+I+FCCGRKFLFNRAFDVYKKM  S+D KPS             KFN+L V
Sbjct: 154 SVSVPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSEDCKPSLETYTLLLNALLRKFNKLTV 213

Query: 362 SYGYMHTVRSIHKQMKSLGIIPDTLVLNMIIKAFSKCLQLDEAIRVFREMGLYGCQPNLY 541
            Y Y+H VRS+ KQMK  G+IPDT  LNMIIKA+SKCL++DEAIRVFREMGLYGC+PN Y
Sbjct: 214 CYVYLHAVRSLTKQMKVSGVIPDTFALNMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAY 273

Query: 542 TYSYLIKGLCEKGKVNTALEFFREMRTDRDLVPKGSSYMILICSLAMEQRFDVATDIIYD 721
           TY Y+  GLCEKG+V+  L F+REMR+ +DLVP  S+Y+ILICSL+ME+RF+ AT I++D
Sbjct: 274 TYGYIANGLCEKGRVSQGLGFYREMRS-KDLVPSSSTYVILICSLSMERRFEEATKILFD 332

Query: 722 MLSNSLQPDFLTYKTLLEGLCREGKGDQAFQLLDDFRKRDHMMKENTYKMLLNGLHFLS 898
           ML NS+ PD LTYKTLLEGL REGK + AF+LL+D RK+D  M E TYK L+ GLHFLS
Sbjct: 333 MLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLS 391


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  402 bits (1034), Expect = e-110
 Identities = 196/296 (66%), Positives = 235/296 (79%)
 Frame = +2

Query: 2   ALRAQSDPDLALDIFRWTAQQRRYKHNAQTYLTMLHISVSSRRYRQAETLVEEIIAGACP 181
           AL+AQSDPDLALD+FRWTAQQR YKHN  TYLT++ I +  RR   AETLVEE+IAGAC 
Sbjct: 95  ALQAQSDPDLALDLFRWTAQQRGYKHNHLTYLTIIKILIYRRRCHLAETLVEEVIAGAC- 153

Query: 182 DPTLALYNSVIKFCCGRKFLFNRAFDVYKKMWRSQDAKPSXXXXXXXXXXXXXKFNRLNV 361
           + ++ LYNSVI+FCC RK  FNRAFDVYKKMW+S D KP+             +FN+L+V
Sbjct: 154 EMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSV 213

Query: 362 SYGYMHTVRSIHKQMKSLGIIPDTLVLNMIIKAFSKCLQLDEAIRVFREMGLYGCQPNLY 541
           SY Y+H+VRS+ KQMKS G+IPDT VLNMIIKA+SKCL++DEAIRVFREMGLY CQPN Y
Sbjct: 214 SYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSY 273

Query: 542 TYSYLIKGLCEKGKVNTALEFFREMRTDRDLVPKGSSYMILICSLAMEQRFDVATDIIYD 721
           TY Y+ KGLCEKG+V   LEF++EMR  R L+P  S+YMILICSLAME+RF+ A +I +D
Sbjct: 274 TYGYIAKGLCEKGRVEQGLEFYKEMRV-RGLIPSSSTYMILICSLAMERRFEEAIEICFD 332

Query: 722 MLSNSLQPDFLTYKTLLEGLCREGKGDQAFQLLDDFRKRDHMMKENTYKMLLNGLH 889
           ML NS+ PD LTY+TLLEGLCREG+  +AF LLD+ RKRD +M E T+K LLNGLH
Sbjct: 333 MLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMNEKTFKTLLNGLH 388


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  399 bits (1026), Expect = e-109
 Identities = 189/299 (63%), Positives = 241/299 (80%)
 Frame = +2

Query: 2   ALRAQSDPDLALDIFRWTAQQRRYKHNAQTYLTMLHISVSSRRYRQAETLVEEIIAGACP 181
           A+RAQSDPDLALDIFRWTAQQR YKHN  TYLT++ I +S RRYRQAETL+EE+IAGAC 
Sbjct: 28  AIRAQSDPDLALDIFRWTAQQRNYKHNHITYLTVIKILISGRRYRQAETLIEEVIAGAC- 86

Query: 182 DPTLALYNSVIKFCCGRKFLFNRAFDVYKKMWRSQDAKPSXXXXXXXXXXXXXKFNRLNV 361
           + ++ LYNS+I+FCCGRK LFNRAFD+YKKM +S+D KP+             +FN+LNV
Sbjct: 87  EISVPLYNSMIRFCCGRKLLFNRAFDIYKKMLKSEDCKPTLDTYTLLFNSLLRRFNKLNV 146

Query: 362 SYGYMHTVRSIHKQMKSLGIIPDTLVLNMIIKAFSKCLQLDEAIRVFREMGLYGCQPNLY 541
            Y Y+H V+S+ KQMK+ G+IPDT VLNMIIKA++KCL++DEA+RVFREMGLYGC+ N Y
Sbjct: 147 CYVYLHAVKSLTKQMKASGVIPDTFVLNMIIKAYAKCLEVDEAVRVFREMGLYGCEANAY 206

Query: 542 TYSYLIKGLCEKGKVNTALEFFREMRTDRDLVPKGSSYMILICSLAMEQRFDVATDIIYD 721
           +YSYL+KGLC KG+    L F++EM+  + LVP GS+YMILICSL ME+RF+ A  +++D
Sbjct: 207 SYSYLVKGLCGKGRSGQGLGFYKEMK-GKGLVPSGSTYMILICSLGMERRFEEAIGVVFD 265

Query: 722 MLSNSLQPDFLTYKTLLEGLCREGKGDQAFQLLDDFRKRDHMMKENTYKMLLNGLHFLS 898
           ML +S+ PD LTY+T+LEGLCREG  D+AF+LL+++RK+D  M E  YK LLNGLHF+S
Sbjct: 266 MLGDSMSPDLLTYRTVLEGLCREGMVDKAFELLEEWRKKDGFMGEKNYKSLLNGLHFVS 324


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  393 bits (1010), Expect = e-107
 Identities = 185/299 (61%), Positives = 236/299 (78%)
 Frame = +2

Query: 2   ALRAQSDPDLALDIFRWTAQQRRYKHNAQTYLTMLHISVSSRRYRQAETLVEEIIAGACP 181
           ALR+QSDPDLA DIFRWTAQQR YKH+  TY  M+ I +  +RYR AETLVEE+IAGAC 
Sbjct: 84  ALRSQSDPDLAYDIFRWTAQQRNYKHSHLTYFAMIKILIDGKRYRHAETLVEEVIAGAC- 142

Query: 182 DPTLALYNSVIKFCCGRKFLFNRAFDVYKKMWRSQDAKPSXXXXXXXXXXXXXKFNRLNV 361
           +  + LYNS+I+FCCGRK LFNRAFDVYKKM +S D KP+             +FN+LNV
Sbjct: 143 EMNVQLYNSMIRFCCGRKLLFNRAFDVYKKMLQSDDCKPTLETYTLLLNSLLRRFNKLNV 202

Query: 362 SYGYMHTVRSIHKQMKSLGIIPDTLVLNMIIKAFSKCLQLDEAIRVFREMGLYGCQPNLY 541
            Y Y+H V+S+ KQMK+ G+IPDT  LNMIIKAF+KC ++DEAIRVFREMGLYGC+PN Y
Sbjct: 203 CYVYLHAVKSLTKQMKASGVIPDTFALNMIIKAFAKCREVDEAIRVFREMGLYGCEPNGY 262

Query: 542 TYSYLIKGLCEKGKVNTALEFFREMRTDRDLVPKGSSYMILICSLAMEQRFDVATDIIYD 721
           +Y Y++KGLCEKG+V   L F++EM+  ++L+P G +YMILICSLA++ R   A D+++D
Sbjct: 263 SYGYIVKGLCEKGRVGQGLGFYKEMKR-KELIPSGGTYMILICSLAVDLRLGEAIDVVFD 321

Query: 722 MLSNSLQPDFLTYKTLLEGLCREGKGDQAFQLLDDFRKRDHMMKENTYKMLLNGLHFLS 898
           ML+NS+ PDFLTY+T+LEGLCREGK D+AF+LL++FRKRD  M + TYK+LLN L F++
Sbjct: 322 MLANSMSPDFLTYRTVLEGLCREGKTDEAFELLEEFRKRDMSMSQKTYKILLNALQFVN 380


>ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Glycine max]
          Length = 372

 Score =  392 bits (1006), Expect = e-107
 Identities = 185/296 (62%), Positives = 234/296 (79%)
 Frame = +2

Query: 2   ALRAQSDPDLALDIFRWTAQQRRYKHNAQTYLTMLHISVSSRRYRQAETLVEEIIAGACP 181
           AL+AQSDPDLALDIFRWTAQQR YKH   TYL ++   ++ RRY  AETL+EE+IAGAC 
Sbjct: 73  ALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLIIIKHLIAGRRYHHAETLIEEVIAGACD 132

Query: 182 DPTLALYNSVIKFCCGRKFLFNRAFDVYKKMWRSQDAKPSXXXXXXXXXXXXXKFNRLNV 361
           D ++ LYNS+I+FCCGRKFLFNRAFDVYKKM  S+D KP+             +FN+LNV
Sbjct: 133 DASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSRDCKPNLETYSLLFNSLLRRFNKLNV 192

Query: 362 SYGYMHTVRSIHKQMKSLGIIPDTLVLNMIIKAFSKCLQLDEAIRVFREMGLYGCQPNLY 541
            Y Y+H VRS+ KQMK+ G+IPD+ VLNMIIKA++KCL++DEAIRVFREMGLYGC+PN Y
Sbjct: 193 CYVYLHAVRSLTKQMKASGVIPDSFVLNMIIKAYAKCLEVDEAIRVFREMGLYGCEPNAY 252

Query: 542 TYSYLIKGLCEKGKVNTALEFFREMRTDRDLVPKGSSYMILICSLAMEQRFDVATDIIYD 721
           +Y Y+ KGLCEKG+V+  L F+REMR  + LVP  S+++I++CSLAME+RF+ A ++++D
Sbjct: 253 SYGYIAKGLCEKGRVDQGLRFYREMR-GKGLVPSTSTFVIIVCSLAMERRFEDAIEVLFD 311

Query: 722 MLSNSLQPDFLTYKTLLEGLCREGKGDQAFQLLDDFRKRDHMMKENTYKMLLNGLH 889
           ML  S  PD LTYKT+LEGLCREG+ D+AF+LLD+ +KRD  M E TYK LLN L+
Sbjct: 312 MLGQSRSPDHLTYKTVLEGLCREGRVDEAFELLDECKKRDVSMGEKTYKSLLNDLY 367