BLASTX nr result

ID: Bupleurum21_contig00024844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024844
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27690.3| unnamed protein product [Vitis vinifera]              227   9e-58
ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   227   9e-58
emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]   226   1e-57
ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|XP_004146401.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-...   219   2e-55

>emb|CBI27690.3| unnamed protein product [Vitis vinifera]
          Length = 1150

 Score =  227 bits (578), Expect = 9e-58
 Identities = 103/159 (64%), Positives = 128/159 (80%)
 Frame = +1

Query: 1    VPSDSQYSDVDLKSNETVVRSEGKGSSLEMHKWCKITRNSDLCSATMQNKSSSIVRVDGT 180
            VPSDS+YS+V+L+ +E V+ S+    S +  +WCK+TRNSD CSAT+QNKSS+ + VD  
Sbjct: 709  VPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNSDQCSATIQNKSSNTILVDEV 768

Query: 181  VVEAEDTCLIKCGSEIVPGHVEDGSLSYIFRVMASDQSSTEKMKIMLDVEHARCSICLNI 360
             + +ED+ +IKCGSEI+PG   +G LSY F VM+  +S  E++KI LDVEHA+CSICLNI
Sbjct: 769  AIPSEDSIVIKCGSEIIPGPKNEGYLSYRFEVMSPQESIKEQLKICLDVEHAKCSICLNI 828

Query: 361  WHDVVTGAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCR 477
            WHDVVT APCLHNFCNGCFSEWLRRSQ KHS+VLCPQCR
Sbjct: 829  WHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQCR 867


>ref|XP_002268418.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Vitis vinifera]
          Length = 462

 Score =  227 bits (578), Expect = 9e-58
 Identities = 103/159 (64%), Positives = 128/159 (80%)
 Frame = +1

Query: 1   VPSDSQYSDVDLKSNETVVRSEGKGSSLEMHKWCKITRNSDLCSATMQNKSSSIVRVDGT 180
           VPSDS+YS+V+L+ +E V+ S+    S +  +WCK+TRNSD CSAT+QNKSS+ + VD  
Sbjct: 21  VPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNSDQCSATIQNKSSNTILVDEV 80

Query: 181 VVEAEDTCLIKCGSEIVPGHVEDGSLSYIFRVMASDQSSTEKMKIMLDVEHARCSICLNI 360
            + +ED+ +IKCGSEI+PG   +G LSY F VM+  +S  E++KI LDVEHA+CSICLNI
Sbjct: 81  AIPSEDSIVIKCGSEIIPGPKNEGYLSYRFEVMSPQESIKEQLKICLDVEHAKCSICLNI 140

Query: 361 WHDVVTGAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCR 477
           WHDVVT APCLHNFCNGCFSEWLRRSQ KHS+VLCPQCR
Sbjct: 141 WHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQCR 179


>emb|CAN72250.1| hypothetical protein VITISV_016331 [Vitis vinifera]
          Length = 436

 Score =  226 bits (576), Expect = 1e-57
 Identities = 103/159 (64%), Positives = 128/159 (80%)
 Frame = +1

Query: 1   VPSDSQYSDVDLKSNETVVRSEGKGSSLEMHKWCKITRNSDLCSATMQNKSSSIVRVDGT 180
           VPSDS+YS+V+L+ +E V+ S+   SS +  +WCK+TRNSD CSAT+QNKSS+ + VD  
Sbjct: 8   VPSDSRYSEVELRLDEMVICSDVMFSSFDKQEWCKVTRNSDXCSATIQNKSSNTILVDEV 67

Query: 181 VVEAEDTCLIKCGSEIVPGHVEDGSLSYIFRVMASDQSSTEKMKIMLDVEHARCSICLNI 360
            + +ED+ +IKCGSEI+P    +G LSY F VM+  +S  E++KI LDVEHA+CSICLNI
Sbjct: 68  AIPSEDSIVIKCGSEIIPXPKXEGYLSYRFEVMSPQESIKEQLKICLDVEHAKCSICLNI 127

Query: 361 WHDVVTGAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCR 477
           WHDVVT APCLHNFCNGCFSEWLRRSQ KHS+VLCPQCR
Sbjct: 128 WHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQCR 166


>ref|XP_002330437.1| predicted protein [Populus trichocarpa] gi|222871849|gb|EEF08980.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  223 bits (568), Expect = 1e-56
 Identities = 103/159 (64%), Positives = 126/159 (79%)
 Frame = +1

Query: 1   VPSDSQYSDVDLKSNETVVRSEGKGSSLEMHKWCKITRNSDLCSATMQNKSSSIVRVDGT 180
           VPSDS+YSDV+++SNE V+ SE   +SLE H+WCKITRNSD  SA MQNKS + + VD  
Sbjct: 23  VPSDSRYSDVEIRSNEMVICSEITSTSLEKHEWCKITRNSDQSSAMMQNKSLNTILVDEA 82

Query: 181 VVEAEDTCLIKCGSEIVPGHVEDGSLSYIFRVMASDQSSTEKMKIMLDVEHARCSICLNI 360
            V+ ED  +I CGSEI+PG   +G LSY F++M  + S T  +K+ +D EHA+CSICLN+
Sbjct: 83  TVQNEDDVVINCGSEIIPGPAREGYLSYRFKLMPRE-SFTRWLKVSIDAEHAKCSICLNV 141

Query: 361 WHDVVTGAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCR 477
           WHDVVT APCLHNFCNGCFSEWLRRSQE+H+SVLCPQCR
Sbjct: 142 WHDVVTVAPCLHNFCNGCFSEWLRRSQERHASVLCPQCR 180


>ref|XP_004146401.1| PREDICTED: E3 ubiquitin-protein ligase CHFR-like [Cucumis sativus]
          Length = 435

 Score =  219 bits (557), Expect = 2e-55
 Identities = 99/153 (64%), Positives = 126/153 (82%)
 Frame = +1

Query: 19  YSDVDLKSNETVVRSEGKGSSLEMHKWCKITRNSDLCSATMQNKSSSIVRVDGTVVEAED 198
           Y+D+++ S+ETV+ SE K +S+E H+WCKITRNSDL +AT+QN+SS+ + VD T+V+ ++
Sbjct: 2   YADIEINSDETVIFSETKSTSVEKHEWCKITRNSDLNTATLQNRSSNAIIVDETLVQKDE 61

Query: 199 TCLIKCGSEIVPGHVEDGSLSYIFRVMASDQSSTEKMKIMLDVEHARCSICLNIWHDVVT 378
           T  IKCGSEIV G V DG+LS+ F  M SD    + +KI +DVEHA+CSICLNIWHDVVT
Sbjct: 62  TTFIKCGSEIVSGPVRDGNLSFKFE-MLSDSKLCKGLKISVDVEHAKCSICLNIWHDVVT 120

Query: 379 GAPCLHNFCNGCFSEWLRRSQEKHSSVLCPQCR 477
            APC HNFCNGCFSEWL+RSQEKH++VLCPQCR
Sbjct: 121 AAPCFHNFCNGCFSEWLKRSQEKHTNVLCPQCR 153


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