BLASTX nr result
ID: Bupleurum21_contig00024817
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024817 (1178 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257... 216 9e-54 ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2... 210 6e-52 ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218... 208 2e-51 ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like... 205 2e-50 ref|NP_175432.2| uncharacterized protein [Arabidopsis thaliana] ... 200 5e-49 >ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera] gi|297737934|emb|CBI27135.3| unnamed protein product [Vitis vinifera] Length = 552 Score = 216 bits (550), Expect = 9e-54 Identities = 115/213 (53%), Positives = 150/213 (70%), Gaps = 16/213 (7%) Frame = +3 Query: 588 MLPTKSSRLLSILGIGASDGDY-SKKSDPSISPPLLKLQTDKEVYRPGDQVIITIEIQNP 764 MLP + S S G G S+ Y S S P LKL+TDK+VYRPG+ ++++IEI NP Sbjct: 1 MLPPRVSFGFSFFGSGDSNKAYDSVGGGKSELVPSLKLRTDKDVYRPGESIVVSIEIHNP 60 Query: 765 --ITD------------CSLLVETLSFEIKGIEKLESQWFTTQGP-GESKQKRGEYVFMD 899 + D C LLVE LSFEIKGIEKL+SQW+ TQ P SKQ+RGE+ F+D Sbjct: 61 SGVVDELSKKENAGDVLCPLLVEMLSFEIKGIEKLDSQWYATQKPLPGSKQRRGEHTFLD 120 Query: 900 SSIPSLVSNQIISSGGTKTFVVRTLLPNIIPPSFRGATIRYLYYIKSILSGQYLILENGK 1079 + PS+VSNQI+S+G KT+V RT LP+I+PPS+RGATIRY YY++ LSG++L+LENG Sbjct: 121 CATPSIVSNQIVSAGAVKTYVARTELPSIVPPSYRGATIRYFYYVRCTLSGRWLVLENGH 180 Query: 1080 FPGESIRDISQLVARIPMQLWVPQKTNGLLYED 1178 P ES +D+ +L ARIP+Q+WV QKT+GLL E+ Sbjct: 181 SPRESRKDLIELEARIPLQIWVTQKTSGLLIEE 213 >ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1| predicted protein [Populus trichocarpa] Length = 533 Score = 210 bits (534), Expect = 6e-52 Identities = 111/199 (55%), Positives = 143/199 (71%), Gaps = 10/199 (5%) Frame = +3 Query: 612 LLSILGIGAS---DGDYSKKSDPSISPPLLKLQTDKEVYRPGDQVIITIEIQNPITDCS- 779 +L+ G G S D + D + P LK+QTDK+VYRPGD +++TIEI NP S Sbjct: 1 MLAFFGSGGSRKVDNSSDGRKDELV--PTLKVQTDKDVYRPGDSILVTIEISNPKDGASE 58 Query: 780 -----LLVETLSFEIKGIEKLESQWFTTQGP-GESKQKRGEYVFMDSSIPSLVSNQIISS 941 LL+E L F I+GI+KL++QWF TQ P SKQ+RGE+VFMD S S+VSNQI+SS Sbjct: 59 DVMSSLLIEKLGFAIRGIQKLDNQWFATQKPLPGSKQRRGEHVFMDCSTSSIVSNQIVSS 118 Query: 942 GGTKTFVVRTLLPNIIPPSFRGATIRYLYYIKSILSGQYLILENGKFPGESIRDISQLVA 1121 G TKT+VVRTLLP+IIPPS+RGATIRY+YY++S LSGQ L+L+N ES +D+ QL Sbjct: 119 GATKTYVVRTLLPSIIPPSYRGATIRYIYYVESTLSGQQLMLDNTNSHRESSKDLLQLED 178 Query: 1122 RIPMQLWVPQKTNGLLYED 1178 RIP+Q+WV QK NGL+ E+ Sbjct: 179 RIPLQIWVAQKGNGLIVEE 197 >ref|XP_004137181.1| PREDICTED: uncharacterized protein LOC101218523 [Cucumis sativus] Length = 538 Score = 208 bits (529), Expect = 2e-51 Identities = 107/190 (56%), Positives = 144/190 (75%), Gaps = 3/190 (1%) Frame = +3 Query: 618 SILGIGASDGDYSKKSDPSISPPLLKLQTDKEVYRPGDQVIITIEIQN--PITDCSLLVE 791 SI G GA+ D +KS S P LKL++DK+VYRPGD V++TIEI + P DCSLL+E Sbjct: 7 SIFGTGAAAADKVEKSAKSEFFPGLKLRSDKDVYRPGDPVVVTIEICSSVPQLDCSLLIE 66 Query: 792 TLSFEIKGIEKLESQWFTTQGP-GESKQKRGEYVFMDSSIPSLVSNQIISSGGTKTFVVR 968 L FEI G+ KL++QWF+TQ P SKQ+RGE++FMD S+ S+VS+QIISSG K++VVR Sbjct: 67 RLRFEIIGLHKLDAQWFSTQKPIPGSKQRRGEHIFMDCSVQSIVSSQIISSGAMKSYVVR 126 Query: 969 TLLPNIIPPSFRGATIRYLYYIKSILSGQYLILENGKFPGESIRDISQLVARIPMQLWVP 1148 + LP IPPS++GATIRY+YY+KS L G++L ENG+ ES +D ++ AR+P+Q+WV Sbjct: 127 STLPTCIPPSYKGATIRYMYYVKSTLLGRWLSQENGRSHKESPKDQIEMEARLPLQVWVT 186 Query: 1149 QKTNGLLYED 1178 QKTNG+L E+ Sbjct: 187 QKTNGMLMEE 196 >ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] Length = 529 Score = 205 bits (522), Expect = 2e-50 Identities = 106/190 (55%), Positives = 141/190 (74%), Gaps = 2/190 (1%) Frame = +3 Query: 615 LSILGIGASDGDYSKKSDPSIS-PPLLKLQTDKEVYRPGDQVIITIEIQNPITDCSLLVE 791 LS G G G K S + P LKL+TDK+VYRPGD VIITI+I NP S L+E Sbjct: 6 LSFFG-GGDSGLLDKNSSKNEEIVPTLKLETDKQVYRPGDPVIITIQISNPSNGYSFLME 64 Query: 792 TLSFEIKGIEKLESQWFTTQGP-GESKQKRGEYVFMDSSIPSLVSNQIISSGGTKTFVVR 968 LSFEI+GIEKL++QWF TQ P S+Q+RGE+VF+DSS P LV+NQII++G +K++VVR Sbjct: 65 RLSFEIRGIEKLDTQWFATQKPLPGSRQRRGEHVFVDSSTPILVANQIINAGTSKSYVVR 124 Query: 969 TLLPNIIPPSFRGATIRYLYYIKSILSGQYLILENGKFPGESIRDISQLVARIPMQLWVP 1148 T+LP+IIPPS++G+ IRYLYY+KS ++G +LILENG+ E D++ L RIP+Q+WV Sbjct: 125 TMLPSIIPPSYKGSNIRYLYYVKSAITGGWLILENGQSRTEPTNDVTDLEVRIPLQIWVN 184 Query: 1149 QKTNGLLYED 1178 QK++G +D Sbjct: 185 QKSSGFPLDD 194 >ref|NP_175432.2| uncharacterized protein [Arabidopsis thaliana] gi|20268711|gb|AAM14059.1| unknown protein [Arabidopsis thaliana] gi|21689887|gb|AAM67504.1| unknown protein [Arabidopsis thaliana] gi|332194396|gb|AEE32517.1| uncharacterized protein [Arabidopsis thaliana] Length = 532 Score = 200 bits (509), Expect = 5e-49 Identities = 105/197 (53%), Positives = 140/197 (71%), Gaps = 6/197 (3%) Frame = +3 Query: 606 SRLLSILGIGASD--GDYSKKSDPSISPPLLKLQTDKEVYRPGDQVIITIEIQNP---IT 770 S S LGIG+S D S I P L +QTDK+VYRPGD + +TIE+ N + Sbjct: 3 SSRFSFLGIGSSSEVNDSVGVSGSKIKPSL-SVQTDKDVYRPGDSIFVTIEVANSHDNAS 61 Query: 771 DCSLLVETLSFEIKGIEKLESQWFTTQGPGE-SKQKRGEYVFMDSSIPSLVSNQIISSGG 947 + S+LVE LSFE+KG+EKL+ QWF+TQ P SK +RGE++F+DSS PSL+SNQI+S G Sbjct: 62 NPSILVEKLSFEVKGLEKLDIQWFSTQKPSPGSKGRRGEHIFLDSSTPSLISNQILSPGA 121 Query: 948 TKTFVVRTLLPNIIPPSFRGATIRYLYYIKSILSGQYLILENGKFPGESIRDISQLVARI 1127 T +VR +LP IIPPS++GAT+RYLYYIKS L G+++ LEN +F +S +D ++ RI Sbjct: 122 KMTLMVRAILPQIIPPSYKGATLRYLYYIKSTLCGRWMALENSQFYKDSTQDFIEVETRI 181 Query: 1128 PMQLWVPQKTNGLLYED 1178 P+Q+WV QK NGLL E+ Sbjct: 182 PLQVWVIQKNNGLLLEE 198