BLASTX nr result

ID: Bupleurum21_contig00024655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024655
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...    72   5e-11
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A...    67   2e-09
ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232...    66   3e-09
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/116 (36%), Positives = 57/116 (49%)
 Frame = +2

Query: 38  ELNKSAVLLQLWRIVTKHSNYIWVLWLQSTYMSKRPFWTMKIPYNCPWNFRKILQARPNA 217
           E NK A+L  +W +       IW  W++S  +  R FWT+K P NC W + KIL+ R  A
Sbjct: 168 EWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLA 227

Query: 218 IQHIRYVIRDGSNTLLWHDPWVEGGPLMAQFGSSIISALESENLASVASIIQHGTW 385
              ++Y+I DG  T LW D W    PL   +G   I        A V  +IQ+  W
Sbjct: 228 WPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 283


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/94 (32%), Positives = 52/94 (55%)
 Frame = +2

Query: 44  NKSAVLLQLWRIVTKHSNYIWVLWLQSTYMSKRPFWTMKIPYNCPWNFRKILQARPNAIQ 223
           N ++ L  LW ++ K S  +WV W+++  +  R  W + +     W FR IL+ R     
Sbjct: 153 NIASTLKILWLLLVK-SGSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKREILEA 211

Query: 224 HIRYVIRDGSNTLLWHDPWVEGGPLMAQFGSSII 325
           H+   + +G    +W DPW++GGP++ QFG S+I
Sbjct: 212 HVNIEVGNGKKCRVWLDPWIQGGPIIQQFGESVI 245


>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 288

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = +2

Query: 44  NKSAVLLQLWRIVTKHSNYIWVLWLQSTYMSKRPFWTMKIPYNCPWNFRKILQARPNAIQ 223
           N ++ L  LW ++ K  + +WV W+++  +  R  W + +     W FR IL+ R     
Sbjct: 31  NIASTLKILWLLLVKSCS-LWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKRDILKA 89

Query: 224 HIRYVIRDGSNTLLWHDPWVEGGPLMAQFGSSIISALESENLASVASII-QHGTW 385
           H++  + +G    +W DP ++GGP++ QFG  +I   +S   A +   + + G W
Sbjct: 90  HVKMEVGNGKKCRVWLDPRIQGGPIIQQFGERVIYDADSRRDARLVDFMGRDGDW 144


>ref|XP_004174134.1| PREDICTED: uncharacterized protein LOC101232257, partial [Cucumis
           sativus]
          Length = 297

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/109 (29%), Positives = 56/109 (51%)
 Frame = +2

Query: 44  NKSAVLLQLWRIVTKHSNYIWVLWLQSTYMSKRPFWTMKIPYNCPWNFRKILQARPNAIQ 223
           N ++ L  LW ++ K S  +WV W++S  +  R  W +       W FR+IL+ +     
Sbjct: 99  NIASTLKILWLLLVK-SGSLWVAWVESYILKGRSLWEIDAGVGRSWCFREILRKQDILKA 157

Query: 224 HIRYVIRDGSNTLLWHDPWVEGGPLMAQFGSSIISALESENLASVASII 370
           H++  + +G    +W  PW++GGP++ QFG  +I    S   AS+   +
Sbjct: 158 HVKMEVGNGRKYRVWLVPWIQGGPIIQQFGERVIYDASSRWDASLVDFM 206


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/89 (37%), Positives = 44/89 (49%)
 Frame = +2

Query: 119  QSTYMSKRPFWTMKIPYNCPWNFRKILQARPNAIQHIRYVIRDGSNTLLWHDPWVEGGPL 298
            +S  +  R FWT+K P NC W + KIL+ R  A   ++Y+I DG  T LW D W    PL
Sbjct: 1068 RSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPL 1127

Query: 299  MAQFGSSIISALESENLASVASIIQHGTW 385
               +G   I        A V  +IQ+  W
Sbjct: 1128 ADSYGERFIYDSGMAKNAKVNVLIQNSEW 1156


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