BLASTX nr result

ID: Bupleurum21_contig00024653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024653
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32035.3| unnamed protein product [Vitis vinifera]              212   8e-53
ref|XP_002274433.2| PREDICTED: uncharacterized protein LOC100257...   210   2e-52
emb|CAN62089.1| hypothetical protein VITISV_030649 [Vitis vinifera]   210   2e-52
ref|XP_002311796.1| predicted protein [Populus trichocarpa] gi|2...   209   7e-52
ref|XP_002311872.1| predicted protein [Populus trichocarpa] gi|2...   208   9e-52

>emb|CBI32035.3| unnamed protein product [Vitis vinifera]
          Length = 736

 Score =  212 bits (539), Expect = 8e-53
 Identities = 105/186 (56%), Positives = 132/186 (70%)
 Frame = +1

Query: 109 ILIKHDIQTLFFTHTHKLQL*VDRSVCMEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSR 288
           + ++  + +L      KL + +D    ME F    AV LRSHLDKYL+AD ++++VRQSR
Sbjct: 88  VFVQLSLSSLLRNQFKKLLVCIDH---MELFRTAKAVTLRSHLDKYLVADDDKETVRQSR 144

Query: 289 NGSTRRADWIVEIVDTNSHVVRLRSCYGRYLTASSAPFLLGMTGNKVLQTVPENIKDFAI 468
           NG +RRA W+VE    + HV+RL+SC+GRYLTAS   +LLGMTG KV QTVP N  D  I
Sbjct: 145 NGLSRRAKWLVE---GSGHVIRLKSCHGRYLTASDTAYLLGMTGKKVTQTVPGNTSDALI 201

Query: 469 EWQPIRDGFQVKIRGFGGKYLRANGGTVPWRNSVTHDNPQNGSANNWILWTVEGVDVPED 648
           EW+PIRDGFQVK +  GGK+LRANGGT PWRNSVTHD P + +  NWILW VE V+VPE 
Sbjct: 202 EWEPIRDGFQVKFKTRGGKFLRANGGTPPWRNSVTHDYPNSSATRNWILWDVEPVEVPEV 261

Query: 649 EQLNDY 666
           + + DY
Sbjct: 262 DPVADY 267



 Score =  175 bits (444), Expect = 9e-42
 Identities = 81/152 (53%), Positives = 112/152 (73%)
 Frame = +1

Query: 184 VCMEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRADWIVEIVDTNSHVVRLRS 363
           + ME F    AVRLRSH DKYL+AD +++SV Q R+GS++ A W VE+V    +++RLRS
Sbjct: 436 IAMELFHNAKAVRLRSHHDKYLLADDDEESVIQDRSGSSKTARWTVELVKDADNIIRLRS 495

Query: 364 CYGRYLTASSAPFLLGMTGNKVLQTVPENIKDFAIEWQPIRDGFQVKIRGFGGKYLRANG 543
           C+ +YLTAS+ PFLLGMTG KVLQT P  + D ++EW+P+++G ++K+R   G +LRANG
Sbjct: 496 CFNKYLTASNQPFLLGMTGRKVLQTRPGRL-DSSVEWEPVKEGNRIKLRTRYGNFLRANG 554

Query: 544 GTVPWRNSVTHDNPQNGSANNWILWTVEGVDV 639
           G  PWRNSVTHD P   +  +WILW V+ V++
Sbjct: 555 GLPPWRNSVTHDVPHRTATQDWILWVVDIVEI 586



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +1

Query: 190 MEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRADWIVE 324
           ME F    AVRLRSHLD YL+AD +Q++VRQSRNGS+R A W+VE
Sbjct: 1   MEVFSIAKAVRLRSHLDSYLVADDDQETVRQSRNGSSRIARWLVE 45


>ref|XP_002274433.2| PREDICTED: uncharacterized protein LOC100257102 [Vitis vinifera]
          Length = 494

 Score =  210 bits (535), Expect = 2e-52
 Identities = 101/159 (63%), Positives = 121/159 (76%)
 Frame = +1

Query: 190 MEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRADWIVEIVDTNSHVVRLRSCY 369
           ME F    AV LRSHLDKYL+AD ++++VRQSRNG +RRA W+VE    + HV+RL+SC+
Sbjct: 1   MELFRTAKAVTLRSHLDKYLVADDDKETVRQSRNGLSRRAKWLVE---GSGHVIRLKSCH 57

Query: 370 GRYLTASSAPFLLGMTGNKVLQTVPENIKDFAIEWQPIRDGFQVKIRGFGGKYLRANGGT 549
           GRYLTAS   +LLGMTG KV QTVP N  D  IEW+PIRDGFQVK +  GGK+LRANGGT
Sbjct: 58  GRYLTASDTAYLLGMTGKKVTQTVPGNTSDALIEWEPIRDGFQVKFKTRGGKFLRANGGT 117

Query: 550 VPWRNSVTHDNPQNGSANNWILWTVEGVDVPEDEQLNDY 666
            PWRNSVTHD P + +  NWILW VE V+VPE + + DY
Sbjct: 118 PPWRNSVTHDYPNSSATRNWILWDVEPVEVPEVDPVADY 156



 Score =  176 bits (445), Expect = 7e-42
 Identities = 81/154 (52%), Positives = 113/154 (73%)
 Frame = +1

Query: 178 RSVCMEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRADWIVEIVDTNSHVVRL 357
           + + ME F    AVRLRSH DKYL+AD +++SV Q R+GS++ A W VE+V    +++RL
Sbjct: 192 KRIAMELFHNAKAVRLRSHHDKYLLADDDEESVIQDRSGSSKTARWTVELVKDADNIIRL 251

Query: 358 RSCYGRYLTASSAPFLLGMTGNKVLQTVPENIKDFAIEWQPIRDGFQVKIRGFGGKYLRA 537
           RSC+ +YLTAS+ PFLLGMTG KVLQT P  + D ++EW+P+++G ++K+R   G +LRA
Sbjct: 252 RSCFNKYLTASNQPFLLGMTGRKVLQTRPGRL-DSSVEWEPVKEGNRIKLRTRYGNFLRA 310

Query: 538 NGGTVPWRNSVTHDNPQNGSANNWILWTVEGVDV 639
           NGG  PWRNSVTHD P   +  +WILW V+ V++
Sbjct: 311 NGGLPPWRNSVTHDVPHRTATQDWILWVVDIVEI 344


>emb|CAN62089.1| hypothetical protein VITISV_030649 [Vitis vinifera]
          Length = 496

 Score =  210 bits (535), Expect = 2e-52
 Identities = 101/159 (63%), Positives = 121/159 (76%)
 Frame = +1

Query: 190 MEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRADWIVEIVDTNSHVVRLRSCY 369
           ME F    AV LRSHLDKYL+AD ++++VRQSRNG +RRA W+VE    + HV+RL+SC+
Sbjct: 1   MELFRTAKAVTLRSHLDKYLVADDDKETVRQSRNGLSRRAKWLVE---GSGHVIRLKSCH 57

Query: 370 GRYLTASSAPFLLGMTGNKVLQTVPENIKDFAIEWQPIRDGFQVKIRGFGGKYLRANGGT 549
           GRYLTAS   +LLGMTG KV QTVP N  D  IEW+PIRDGFQVK +  GGK+LRANGGT
Sbjct: 58  GRYLTASDTAYLLGMTGKKVTQTVPGNTSDALIEWEPIRDGFQVKFKTRGGKFLRANGGT 117

Query: 550 VPWRNSVTHDNPQNGSANNWILWTVEGVDVPEDEQLNDY 666
            PWRNSVTHD P + +  NWILW VE V+VPE + + DY
Sbjct: 118 PPWRNSVTHDYPNSSATRNWILWDVEPVEVPEVDPVADY 156



 Score =  174 bits (440), Expect = 3e-41
 Identities = 80/154 (51%), Positives = 112/154 (72%)
 Frame = +1

Query: 178 RSVCMEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRADWIVEIVDTNSHVVRL 357
           + + ME F    AVRLR H DKYL+AD +++SV Q R+GS++ A W VE+V    +++RL
Sbjct: 192 KRIAMELFHNAKAVRLRXHHDKYLLADDDEESVIQDRSGSSKTARWTVELVKDADNIIRL 251

Query: 358 RSCYGRYLTASSAPFLLGMTGNKVLQTVPENIKDFAIEWQPIRDGFQVKIRGFGGKYLRA 537
           RSC+ +YLTAS+ PFLLGMTG KVLQT P  + D ++EW+P+++G ++K+R   G +LRA
Sbjct: 252 RSCFNKYLTASNQPFLLGMTGRKVLQTRPGRL-DSSVEWEPVKEGNRIKLRTRYGNFLRA 310

Query: 538 NGGTVPWRNSVTHDNPQNGSANNWILWTVEGVDV 639
           NGG  PWRNSVTHD P   +  +WILW V+ V++
Sbjct: 311 NGGLPPWRNSVTHDVPHRTATQDWILWVVDIVEI 344


>ref|XP_002311796.1| predicted protein [Populus trichocarpa] gi|222851616|gb|EEE89163.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  209 bits (531), Expect = 7e-52
 Identities = 96/161 (59%), Positives = 123/161 (76%), Gaps = 2/161 (1%)
 Frame = +1

Query: 190 MEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRAD-WIVEIVDTNSHVVRLRSC 366
           MEFF K  A++LRSHL KYLIAD++Q++VRQ+R+G +R+A  W VE+VD  SHV+RLR+C
Sbjct: 1   MEFFTKTKAIKLRSHLYKYLIADFDQETVRQTRHGISRKAVIWFVELVDGKSHVIRLRNC 60

Query: 367 YGRYLTASSAPFLLGMTGNKVLQTVPENIKDFA-IEWQPIRDGFQVKIRGFGGKYLRANG 543
           YG+YL AS  PF LG+TG K+LQTVPE+I D   +EW+P+RDG QVK + + G +LRANG
Sbjct: 61  YGKYLAASDLPFFLGVTGKKILQTVPEDITDICKMEWEPVRDGSQVKFKSWCGNFLRANG 120

Query: 544 GTVPWRNSVTHDNPQNGSANNWILWTVEGVDVPEDEQLNDY 666
           G  PWRN+VTHD P  GS   WI W +E V VPE++ L DY
Sbjct: 121 GAPPWRNAVTHDEPPTGSTQKWIFWDIEAVQVPENDSLVDY 161


>ref|XP_002311872.1| predicted protein [Populus trichocarpa] gi|222851692|gb|EEE89239.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  208 bits (530), Expect = 9e-52
 Identities = 99/162 (61%), Positives = 123/162 (75%), Gaps = 3/162 (1%)
 Frame = +1

Query: 190 MEFFDKKAAVRLRSHLDKYLIADYNQQSVRQSRNGSTRRAD-WIVEIVDTNSHVVRLRSC 366
           MEFF K  AV+LRSHL+KYLIAD + ++ RQ+R+GS+R+A  W VE+VD  SHV+RL+SC
Sbjct: 1   MEFFTKTKAVKLRSHLEKYLIADEDLETARQTRHGSSRKAAIWFVELVDEKSHVIRLKSC 60

Query: 367 YGRYLTASSAPFLLGMTGNKVLQTV--PENIKDFAIEWQPIRDGFQVKIRGFGGKYLRAN 540
           YGRYLTAS  PFLLGMTG KV+QT     N  ++ +EW+PIRDGFQVK++ + GK+LRAN
Sbjct: 61  YGRYLTASDMPFLLGMTGKKVIQTELSENNFDNWKLEWEPIRDGFQVKLKSWCGKFLRAN 120

Query: 541 GGTVPWRNSVTHDNPQNGSANNWILWTVEGVDVPEDEQLNDY 666
           GGT PWRNSVTHD P  GS   WILW +E V    ++ L DY
Sbjct: 121 GGTPPWRNSVTHDEPHTGSTRKWILWDIEAVQEIGNDSLKDY 162


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