BLASTX nr result

ID: Bupleurum21_contig00024613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024613
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598626.1| ADP-ribosylation factor GTPase-activating pr...   313   4e-83
ref|XP_002513070.1| DNA binding protein, putative [Ricinus commu...   312   7e-83
ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arab...   302   6e-80
ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activat...   302   7e-80

>ref|XP_003598626.1| ADP-ribosylation factor GTPase-activating protein [Medicago
           truncatula] gi|355487674|gb|AES68877.1| ADP-ribosylation
           factor GTPase-activating protein [Medicago truncatula]
           gi|388514945|gb|AFK45534.1| unknown [Medicago
           truncatula]
          Length = 400

 Score =  313 bits (801), Expect = 4e-83
 Identities = 162/245 (66%), Positives = 198/245 (80%), Gaps = 9/245 (3%)
 Frame = -1

Query: 853 RRKYELQQFMMPEGTSLCCPF------PYTSSHNCCTAICTVPDKRIVDKNHKGYGIGHA 692
           RRKYELQQF+  E  +L CPF        +SSH+  ++     +K+  DK      IG +
Sbjct: 157 RRKYELQQFLDSE-ENLICPFIPSHSRTTSSSHSSSSSYNPPQEKKRYDKQTTRNRIGLS 215

Query: 691 FHNSWRKSD---KSNKKSTSMAGMVEFIGLIKVNVVRGTNLAIRDMMTSDPYVILSLGNQ 521
           F NSW + D   KS KKS S+AGMVEF+GLIKVNVV+GTNLAIRD++TSDPYVILSLG+Q
Sbjct: 216 FRNSWGRKDSESKSTKKSNSLAGMVEFVGLIKVNVVKGTNLAIRDIVTSDPYVILSLGHQ 275

Query: 520 SVKTRVIKNNLNPVWNEKLMLSIPESVPPLKLLVYDKDTFTNDDFMGDAEIDIQPLVTAA 341
           SVKTRVIKNNLNPVWNE LMLSIPE++PPLK++VYDKD+F NDDFMG+AEIDIQPLV+AA
Sbjct: 276 SVKTRVIKNNLNPVWNESLMLSIPENIPPLKIIVYDKDSFKNDDFMGEAEIDIQPLVSAA 335

Query: 340 RATELVKLEETMQLGKWVSTNDNTLLKDGVINLIDGKVKQDILLRLQNVERGVLQIELEC 161
           +A E   + E+MQLGKWV++ DNTL+KDG+I+L +GKV+Q+I LRLQNVERGVL+I+LEC
Sbjct: 336 KAYEKSSIMESMQLGKWVASGDNTLVKDGIISLEEGKVRQEISLRLQNVERGVLEIQLEC 395

Query: 160 VPLTQ 146
           VPLTQ
Sbjct: 396 VPLTQ 400


>ref|XP_002513070.1| DNA binding protein, putative [Ricinus communis]
           gi|223548081|gb|EEF49573.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 382

 Score =  312 bits (799), Expect = 7e-83
 Identities = 159/239 (66%), Positives = 188/239 (78%), Gaps = 3/239 (1%)
 Frame = -1

Query: 853 RRKYELQQFMMPEGTSLCCPFPYTSSHNCCTAICTVPDKRIVDKNHKGYGIGHAFHNSWR 674
           RRKYEL QF+      + CP+    S +      +  +K+  DK    + IG+AF NSW 
Sbjct: 145 RRKYELLQFLN-YSDQMICPYKPQRSSSAAQMSSSSQEKKQYDKQATRHRIGNAFRNSWG 203

Query: 673 KSDKSNK---KSTSMAGMVEFIGLIKVNVVRGTNLAIRDMMTSDPYVILSLGNQSVKTRV 503
           + D  NK   KS SMAGMVEF+GLIKVNVV+GTNLA+RD++TSDPYVILSLG+QSV+TRV
Sbjct: 204 RKDSENKQSKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVVTSDPYVILSLGHQSVRTRV 263

Query: 502 IKNNLNPVWNEKLMLSIPESVPPLKLLVYDKDTFTNDDFMGDAEIDIQPLVTAARATELV 323
           IKNNLNPVWNE LMLSIP+ +P LK+LVYDKDTFT DDFMG+AEIDIQPLV AA+A E  
Sbjct: 264 IKNNLNPVWNESLMLSIPDHIPALKVLVYDKDTFTTDDFMGEAEIDIQPLVAAAKAYETS 323

Query: 322 KLEETMQLGKWVSTNDNTLLKDGVINLIDGKVKQDILLRLQNVERGVLQIELECVPLTQ 146
            + E MQLGKWV++ DNTLLKDG+I L+DGKVKQ+I LRLQNVERGVL+IELECVPLTQ
Sbjct: 324 TINEPMQLGKWVASKDNTLLKDGIITLLDGKVKQEISLRLQNVERGVLEIELECVPLTQ 382


>ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|222846469|gb|EEE84016.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  305 bits (780), Expect = 1e-80
 Identities = 157/240 (65%), Positives = 191/240 (79%), Gaps = 4/240 (1%)
 Frame = -1

Query: 853 RRKYELQQFMMPEGTSLCCPFPYT-SSHNCCTAICTVPDKRIVDKNHKGYGIGHAFHNSW 677
           RRKYEL++F   +   +  PFP + SS    +  C   DK+  +K    + IG+AF NSW
Sbjct: 120 RRKYELKEFSNCD-EQMSSPFPGSISSLPTPSNNCPSQDKKQYEKQATRHRIGNAFRNSW 178

Query: 676 RKSD---KSNKKSTSMAGMVEFIGLIKVNVVRGTNLAIRDMMTSDPYVILSLGNQSVKTR 506
            + D   K  KKS S+AGMVEFIGLIKVNVV+GTNLA+RD+MTSDPYVI+SLG QSV+TR
Sbjct: 179 GRKDSEHKHTKKSYSLAGMVEFIGLIKVNVVKGTNLAVRDVMTSDPYVIISLGQQSVRTR 238

Query: 505 VIKNNLNPVWNEKLMLSIPESVPPLKLLVYDKDTFTNDDFMGDAEIDIQPLVTAARATEL 326
           VIKNNLNP+WNE LMLSIPE +PPLK+LVYDKDTFT DDFMG+AEIDIQPLV AA+A E 
Sbjct: 239 VIKNNLNPIWNESLMLSIPEQIPPLKVLVYDKDTFTTDDFMGEAEIDIQPLVAAAKAYEN 298

Query: 325 VKLEETMQLGKWVSTNDNTLLKDGVINLIDGKVKQDILLRLQNVERGVLQIELECVPLTQ 146
             + E+MQLGKW++  +NTL+KDG+I L+DGKVKQ+I L+L+NVERGVL+IELECVPLTQ
Sbjct: 299 STITESMQLGKWIAGQENTLVKDGIITLVDGKVKQEISLKLKNVERGVLEIELECVPLTQ 358


>ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arabidopsis lyrata subsp.
           lyrata] gi|297328399|gb|EFH58818.1| hypothetical protein
           ARALYDRAFT_478135 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  302 bits (774), Expect = 6e-80
 Identities = 158/240 (65%), Positives = 192/240 (80%), Gaps = 4/240 (1%)
 Frame = -1

Query: 853 RRKYELQQFMMPEGTSLCCPFPYTSSHNCCT-AICTVPDKRIVDKNHKGYGIGHAFHNSW 677
           R+KYE  QFM P+  +LC P+   S  N    ++C+   +   ++      IGHAF NSW
Sbjct: 151 RKKYEQHQFMDPKDGALC-PYQQPSRTNTSPPSLCSASHRSTKNR------IGHAFRNSW 203

Query: 676 --RKSD-KSNKKSTSMAGMVEFIGLIKVNVVRGTNLAIRDMMTSDPYVILSLGNQSVKTR 506
             R+SD K  KKS SMAGMVEF+GLIKVNVV+GTNLA+RD+MTSDPYVIL+LG QSVKTR
Sbjct: 204 GRRESDHKGPKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILALGQQSVKTR 263

Query: 505 VIKNNLNPVWNEKLMLSIPESVPPLKLLVYDKDTFTNDDFMGDAEIDIQPLVTAARATEL 326
           VIKNNLNPVWNE LMLSIPE +PPLK+LVYDKDTF+ DDFMG+AEIDIQPLV+AA+A E 
Sbjct: 264 VIKNNLNPVWNETLMLSIPEPMPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVSAAKAYET 323

Query: 325 VKLEETMQLGKWVSTNDNTLLKDGVINLIDGKVKQDILLRLQNVERGVLQIELECVPLTQ 146
             ++E MQLG WV++ +NTL+ DG+I+L +GKVKQDI LRLQNVERGVL+I+LEC+PLTQ
Sbjct: 324 SSIKEPMQLGSWVASKENTLVSDGIISLEEGKVKQDISLRLQNVERGVLEIQLECLPLTQ 383


>ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activating protein AGD11
           [Arabidopsis thaliana]
           gi|75154127|sp|Q8L7A4.1|AGD11_ARATH RecName:
           Full=Probable ADP-ribosylation factor GTPase-activating
           protein AGD11; Short=ARF GAP AGD11; AltName:
           Full=Protein ARF-GAP DOMAIN 11; Short=AtAGD11
           gi|22531086|gb|AAM97047.1| putative GTPase-activating
           protein [Arabidopsis thaliana]
           gi|25083805|gb|AAN72120.1| putative GTPase-activating
           protein [Arabidopsis thaliana]
           gi|332641102|gb|AEE74623.1| putative ADP-ribosylation
           factor GTPase-activating protein AGD11 [Arabidopsis
           thaliana]
          Length = 385

 Score =  302 bits (773), Expect = 7e-80
 Identities = 156/239 (65%), Positives = 190/239 (79%), Gaps = 3/239 (1%)
 Frame = -1

Query: 853 RRKYELQQFMMPEGTSLCCPFPYTSSHNCCTAICTVPDKRIVDKNHKGYGIGHAFHNSW- 677
           R+KYE  QFM P+  +LC     + ++    ++C+   +   ++      IGHAF NSW 
Sbjct: 153 RKKYEQHQFMDPKDGALCTYQQPSRTNTSPPSLCSASHRSTKNR------IGHAFRNSWG 206

Query: 676 -RKSD-KSNKKSTSMAGMVEFIGLIKVNVVRGTNLAIRDMMTSDPYVILSLGNQSVKTRV 503
            R+SD K  KKS SMAGMVEF+GLIKVNVV+GTNLA+RD+MTSDPYVIL+LG QSVKTRV
Sbjct: 207 RRESDHKGPKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILALGQQSVKTRV 266

Query: 502 IKNNLNPVWNEKLMLSIPESVPPLKLLVYDKDTFTNDDFMGDAEIDIQPLVTAARATELV 323
           IKNNLNPVWNE LMLSIPE +PPLK+LVYDKDTF+ DDFMG+AEIDIQPLV+AA+A E  
Sbjct: 267 IKNNLNPVWNETLMLSIPEPMPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVSAAKAYETS 326

Query: 322 KLEETMQLGKWVSTNDNTLLKDGVINLIDGKVKQDILLRLQNVERGVLQIELECVPLTQ 146
            ++E MQLG WV++ +NTL+ DG+I L DGKVKQDI LRLQNVERGVL+I+LEC+PLTQ
Sbjct: 327 SIKEPMQLGSWVASKENTLVSDGIILLEDGKVKQDISLRLQNVERGVLEIQLECLPLTQ 385


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