BLASTX nr result

ID: Bupleurum21_contig00024515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024515
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19374.3| unnamed protein product [Vitis vinifera]              328   2e-87
emb|CAN77737.1| hypothetical protein VITISV_020688 [Vitis vinifera]   313   9e-83
ref|XP_002320679.1| predicted protein [Populus trichocarpa] gi|2...   306   1e-80
ref|XP_003524027.1| PREDICTED: uncharacterized protein LOC100794...   303   7e-80
ref|XP_002510066.1| conserved hypothetical protein [Ricinus comm...   303   1e-79

>emb|CBI19374.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  328 bits (841), Expect = 2e-87
 Identities = 199/428 (46%), Positives = 249/428 (58%), Gaps = 29/428 (6%)
 Frame = +3

Query: 84   MSWLARSIATSLRIDDDDTAGDNSRHADETAGDVHSXXXXXXXXXXXQQRGMKEDFSEFR 263
            MSWLARS+A SLR+DDD          D T  +                RG+KED +EF+
Sbjct: 1    MSWLARSLANSLRLDDDRDGEGEDDGDDTTIPETREEKNTEEPELDQHGRGVKEDLTEFK 60

Query: 264  ETLSRQIWGVASFLAPPPSNHQQITDQSTADRNLSVSDTEGDSDEET----------AVD 413
            +TL+RQ+WGVASFLAPPP        QS+A  N   S +   SDEET          A  
Sbjct: 61   QTLTRQLWGVASFLAPPPPA------QSSAPSNPHDSVSGEISDEETFDSVGIRDDIAGI 114

Query: 414  SARYSQSEKCRSGFTGLAHM-------LPFRLEDQ-------IGGAVGITEESLAFASNI 551
              R+       S    ++ +       LPFR + +         G  GITEE LAFA NI
Sbjct: 115  GGRFRPEISNPSNNRAVSEISEMDSNFLPFRSDGRDSVEEYDFEGIPGITEEVLAFARNI 174

Query: 552  AHHPETWLDFPLSEEEDIDDFDMSDAQCKHTVAVERLVPRLAALRIELCPAHMSKGYFWK 731
            AHHPETWLDFPL EE+D+DDFDMSDAQ  H +A+E L PRLAALRIELCP+HMSKGYFWK
Sbjct: 175  AHHPETWLDFPLEEEDDLDDFDMSDAQEDHALAIEHLAPRLAALRIELCPSHMSKGYFWK 234

Query: 732  VYFVLLHSRLNRHDAELLSTQQVVAARSMWMQELQKRVKSESYQFRSSTPYARERSNSHA 911
            +YFVLLHSRLNR DAELLST Q+VAAR+MWMQELQK+ K E      ST Y++E ++ H 
Sbjct: 235  IYFVLLHSRLNRQDAELLSTPQIVAARAMWMQELQKKTKPEPDWSGRSTYYSKESTSLHQ 294

Query: 912  DDYDAYSFETPKCTDSRTSSFEP-----TIESDIDKYPIVSCDSPTVDKSVIKEESVTQT 1076
            +D  + +    +    RT + EP     T + + +KY + + +S   DKSVI+E+   + 
Sbjct: 295  EDSASTNNSHSENMPFRTFALEPVSFPVTTDLETEKYTLANSESQISDKSVIEEK--PEV 352

Query: 1077 RVKEVVAGPSYNGSVQQYXXXXXXXXWLDHHSEIGGYGTPTIFFGTHEDVSFSDLEDNDD 1256
            R K+ + GPS    +Q Y          D   E+G Y    I  G  EDVSFSDLED DD
Sbjct: 353  RTKDFLPGPSSKVLIQNYEDDEDDWP-EDEILELGAYSRTVIPVGHEEDVSFSDLED-DD 410

Query: 1257 CTMPMKSK 1280
            C +P+KSK
Sbjct: 411  CIIPIKSK 418


>emb|CAN77737.1| hypothetical protein VITISV_020688 [Vitis vinifera]
          Length = 967

 Score =  313 bits (801), Expect = 9e-83
 Identities = 191/434 (44%), Positives = 239/434 (55%), Gaps = 44/434 (10%)
 Frame = +3

Query: 84   MSWLARSIATSLRIDDDDTAGDNSRHADETAGDVHSXXXXXXXXXXXQQRGMKEDFSEFR 263
            MSWLARS+A SLR+DDD          D T  +                RG+KED +EF+
Sbjct: 3    MSWLARSLANSLRLDDDRDGEGEDDGDDTTIPETREEKNTEEPELDQHGRGVKEDLTEFK 62

Query: 264  ETLSRQIWGVASFLAPPPSNHQQITDQSTADRNL----SVSDTE----GDSDEETAVDSA 419
            +TL+RQ+WGVASFLAPPP        QS+A  N     S+SD E     D      +   
Sbjct: 63   QTLTRQLWGVASFLAPPPPA------QSSAPSNPHDVESISDLEQCEPSDQSVSGEISDE 116

Query: 420  RYSQSEKCRSGFTGL------------------------AHMLPFRLEDQ-------IGG 506
                S   R    G+                        ++ LPFR + +         G
Sbjct: 117  ETFDSVGIRDDIAGIGGRFRPEISNPSNNRAVSEISEMDSNFLPFRSDGRDSVEEYDFEG 176

Query: 507  AVGITEESLAFASNIAHHPETWLDFPLSEEEDIDDFDMSDAQCKHTVAVERLVPRLAALR 686
              GITEE LAFA NIAHHPETWLDFPL EE+D+DDFDMSDAQ  H +A+E L PRLAALR
Sbjct: 177  IPGITEEVLAFARNIAHHPETWLDFPLEEEDDLDDFDMSDAQEDHALAIEHLAPRLAALR 236

Query: 687  IELCPAHMSKGYFWKVYFVLLHSRLNRHDAELLSTQQVVAARSMWMQELQKRVKSESYQF 866
            IELCP+HMSKGYFWK+YFVLLHSRLNR DAELLST Q+VAAR+MWMQELQK+ K E    
Sbjct: 237  IELCPSHMSKGYFWKIYFVLLHSRLNRQDAELLSTPQIVAARAMWMQELQKKTKPEPDWS 296

Query: 867  RSSTPYARERSNSHADDYDAYSFETPKCTDSRTSSFEP-----TIESDIDKYPIVSCDSP 1031
              ST Y+++ ++ H +D  + +    +    RT + EP     T + + +KY     +S 
Sbjct: 297  GRSTYYSKDSTSLHQEDSASTNNSHSENMPFRTFALEPVSFPVTTDLETEKYTXAXSESQ 356

Query: 1032 TVDKSVIKEESVTQTRVKEVVAGPSYNGSVQQYXXXXXXXXWLDHHSEIGGYGTPTIFFG 1211
              DKSVI+E+   + R K+ + GPS    +Q Y          D   E+G Y    I  G
Sbjct: 357  ISDKSVIEEK--PEVRTKDFLPGPSSKVLIQNYEDDEDDWP-EDEILELGAYSRTVIPVG 413

Query: 1212 THEDVSFSDLEDND 1253
              EDVSFSDLED+D
Sbjct: 414  HEEDVSFSDLEDDD 427


>ref|XP_002320679.1| predicted protein [Populus trichocarpa] gi|222861452|gb|EEE98994.1|
            predicted protein [Populus trichocarpa]
          Length = 406

 Score =  306 bits (783), Expect = 1e-80
 Identities = 193/428 (45%), Positives = 251/428 (58%), Gaps = 31/428 (7%)
 Frame = +3

Query: 84   MSWLARSIATSLRIDDDDTAGDNSRHADETAGDVHSXXXXXXXXXXXQQRGMKEDFSEFR 263
            MSWLARSIATSLR+DD+D         D +  DV S           Q+RG+KED +E +
Sbjct: 1    MSWLARSIATSLRLDDED---------DHSENDVASKTPNNSSPVE-QRRGVKEDLTELK 50

Query: 264  ETLSRQIWGVASFLAPPPSNHQQITDQST-ADRNLSVSDTEGDSDEETAVD----SARYS 428
            +TL+RQ+WGVASFLAPPP       DQS  +DR+ S  D    SD     D      R+ 
Sbjct: 51   QTLTRQLWGVASFLAPPPDQSVSNLDQSQPSDRSASSCDEREPSDSRIGHDFSEIGGRFR 110

Query: 429  QSEKCRSGF------------TGLAHMLPFRLED-----------QIGGAVGITEESLAF 539
               K  S +             G  ++     ED           ++ GAVGIT+E LAF
Sbjct: 111  NMSKMASNYFPFGSEENGRENLGGENLQELETEDFGGEDGDDDDWELEGAVGITDEVLAF 170

Query: 540  ASNIAHHPETWLDFPLSEEEDIDDFDMSDAQCKHTVAVERLVPRLAALRIELCPAHMSKG 719
            A NIA HPETWLDFPL EEED+DDFD+SD Q KH +A+ER  PRLAALRIELCP HM++ 
Sbjct: 171  ARNIAMHPETWLDFPLDEEEDLDDFDLSDTQRKHALAIERFAPRLAALRIELCPCHMTES 230

Query: 720  YFWKVYFVLLHSRLNRHDAELLSTQQVVAARSMWMQELQKRVKSESYQFRSSTPYARERS 899
            YFWKVYFVLLHSRL++HDAE+LST QV+ AR+MWMQEL K+ K +S  F S+    ++ +
Sbjct: 231  YFWKVYFVLLHSRLHKHDAEILSTPQVMEARAMWMQELHKQTKPDSDWFGSAR--VKDGN 288

Query: 900  N-SHADDYDAYSFETPKCTDSRTSSFEPTIESDIDKYPIVSCDSPTVDKSVIKEESVTQT 1076
            N  H     A +F+  + T +       T + +  K+PIVS +   VDKS I+E++V +T
Sbjct: 289  NVLHEGFGRARTFDFAQTTIT-------TTDYETVKHPIVSTEMHFVDKSAIEEKTVIKT 341

Query: 1077 RVKEV-VAGPSYNGSVQQYXXXXXXXXWL-DHHSEIGGYGTPTIFFGTHEDVSFSDLEDN 1250
              K+V + G S    V  Y        WL +  S++GGY T  I  G  ED+SFSDLED+
Sbjct: 342  EDKDVQLVGSSLRTVVPNY--EEDEDDWLNEEDSDLGGYKT-IIPVGNEEDISFSDLEDD 398

Query: 1251 DDCTMPMK 1274
               ++P+K
Sbjct: 399  ASNSIPVK 406


>ref|XP_003524027.1| PREDICTED: uncharacterized protein LOC100794286 [Glycine max]
          Length = 415

 Score =  303 bits (776), Expect = 7e-80
 Identities = 189/421 (44%), Positives = 238/421 (56%), Gaps = 23/421 (5%)
 Frame = +3

Query: 84   MSWLARSIATSLRIDDD---------DTAGDNSRHADETAGDVHSXXXXXXXXXXXQQR- 233
            MSWLARS A SLR+D D         D    +SR   +   +              + + 
Sbjct: 1    MSWLARSFANSLRLDGDVDDENDIVLDPPTTSSRDPAQQQHEARENAFGSEAEEDEETQD 60

Query: 234  --GMKEDFSEFRETLSRQIWGVASFLAPPPSNHQQITDQSTADRNLSVSDTEG----DSD 395
              G+KED  E ++TL+RQ WG+ASFLAPPPS+       S +D +  VSD         +
Sbjct: 61   RAGVKEDLDEIKQTLTRQFWGMASFLAPPPSDSHS---HSQSDPSSFVSDQSNHRAVSPN 117

Query: 396  EETAVDSARYSQSEKCRSGFTGLAHMLPFRLEDQIGGAVGITEESLAFASNIAHHPETWL 575
            EE  +D A  S      S   G      F LE +   AVGITEE L FA NIA HPETWL
Sbjct: 118  EELQLDEAAISNHSNSVS--VGSDSEGDFGLEQR---AVGITEEVLVFAMNIAMHPETWL 172

Query: 576  DFPLSEEEDIDDFDMSDAQCKHTVAVERLVPRLAALRIELCPAHMSKGYFWKVYFVLLHS 755
            DFP+ EE+D DDFDMSDAQ +H   VERL PRLAALRIELCP HMS+ YFWKVYFVLLHS
Sbjct: 173  DFPIDEEDDTDDFDMSDAQQEHAAVVERLTPRLAALRIELCPCHMSESYFWKVYFVLLHS 232

Query: 756  RLNRHDAELLSTQQVVAARSMWMQELQKRVKSESYQFRSSTPYARERSNSHADDY----- 920
            RLN+ DA +LST QV+AAR+MWMQEL K+ K E   F  S  Y+R+++    DD+     
Sbjct: 233  RLNKEDAGILSTPQVMAARAMWMQELHKQTKPEFEIFGRSASYSRDKAQH--DDFTPNLL 290

Query: 921  -DAYSFETPKCT-DSRTSSFEPTIESDIDKYPIVSCDSPTVDKSVIKEESVTQTRVKEVV 1094
             DAYS +TP  T   RT+S     + + DK+ + S      DKSVI+E S+ +T  K++ 
Sbjct: 291  DDAYSDDTPNQTYGYRTTSLSMMSDCETDKHMVESSGMHFTDKSVIEENSIIKTENKDLK 350

Query: 1095 AGPSYNGSVQQYXXXXXXXXWLDHHSEIGGYGTPTIFFGTHEDVSFSDLEDNDDCTMPMK 1274
             G      +Q Y        W +  S+IGGYG  T      +D+SFSDLED+D    P+ 
Sbjct: 351  CGRPSQIIIQDY---DDDDEWPEEDSDIGGYGGTTHPMVNEDDISFSDLEDDDYGIKPVS 407

Query: 1275 S 1277
            S
Sbjct: 408  S 408


>ref|XP_002510066.1| conserved hypothetical protein [Ricinus communis]
            gi|223550767|gb|EEF52253.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 425

 Score =  303 bits (775), Expect = 1e-79
 Identities = 184/436 (42%), Positives = 253/436 (58%), Gaps = 27/436 (6%)
 Frame = +3

Query: 84   MSWLARSIATSLRIDDD----DTAGDN------SRHADETAGDVHSXXXXXXXXXXXQQR 233
            MSWLARS A SLR+DDD    D A ++      S+  ++   +              + R
Sbjct: 1    MSWLARSFANSLRVDDDYAENDVASNSPNDPSPSKRNEQDITETSRGRESEEAEAEAEAR 60

Query: 234  GMKEDFSEFRETLSRQIWGVASFLAPPP--SNHQQI---TDQSTADRNLSVSDT----EG 386
            G+KED +E ++TL+RQ WGVASFLAPPP  SN + +    +QS     L   +     EG
Sbjct: 61   GVKEDLTELKQTLTRQFWGVASFLAPPPYTSNDESVCNLNNQSEPYDRLEEGEASDLEEG 120

Query: 387  DSDEETAVDSARYSQSEKCRSGFTGLAHMLPFRLEDQ---IGGAVGITEESLAFASNIAH 557
               +   V+      S+   + F   +       E++       +GIT+E L FA NIA 
Sbjct: 121  SRIKHDLVEIGGRLISKMASNYFPFGSDEFEIENEEEELECEETIGITDEVLTFARNIAM 180

Query: 558  HPETWLDFPLSEEEDIDDFDMSDAQCKHTVAVERLVPRLAALRIELCPAHMSKGYFWKVY 737
            HPETWLDFPL EE+D+DDF++SDAQ +H +A+E+L PRLAALRIELCP HM++ YFWKVY
Sbjct: 181  HPETWLDFPLEEEDDLDDFNLSDAQREHALAIEQLAPRLAALRIELCPCHMTESYFWKVY 240

Query: 738  FVLLHSRLNRHDAELLSTQQVVAARSMWMQELQKRVKSESYQFRSSTPYARERSNSHADD 917
            FVLLHSRLN+HDAE+LST QV+ AR++WM+EL K++K E+  +  S  Y  +  N+   +
Sbjct: 241  FVLLHSRLNKHDAEILSTPQVMEARALWMKELHKQIKPENDWYGRSNTYENDTGNNLLHE 300

Query: 918  YDAYSFETPKCTDSRTSSFEPT----IESDIDKYPIVSCDSPTVDKSVIKEESVTQTRVK 1085
               Y         +RT  FEPT     + + +K+P+VS D   +DKSVI+E+ V +   K
Sbjct: 301  DFGY---------ARTYDFEPTTSRATDYETEKHPVVSTDMQFIDKSVIEEKPVIKLENK 351

Query: 1086 EVVAGPSYNGSVQQYXXXXXXXXWLDHH-SEIGGYGTPTIFFGTHEDVSFSDLEDNDDCT 1262
            +++ G S    V  Y        W D   S++G Y   TI  G  ED SFSDLED+ + T
Sbjct: 352  DLLVGRSSKVPVPNY--EDDYDDWPDEEDSDLGSY-KATIPSGNEEDFSFSDLEDDANST 408

Query: 1263 MPMKSKPLLNDSDTST 1310
            +PMKSK L   ++TST
Sbjct: 409  IPMKSKILAKGTETST 424


Top