BLASTX nr result

ID: Bupleurum21_contig00024500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024500
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   229   6e-58
ref|XP_002525397.1| Signal recognition particle receptor subunit...   229   6e-58
gb|AFK36205.1| unknown [Lotus japonicus]                              228   1e-57
ref|XP_004135257.1| PREDICTED: signal recognition particle recep...   227   2e-57
gb|ADN33824.1| signal recognition particle receptor subunit beta...   227   2e-57

>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
           [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
           protein product [Vitis vinifera]
          Length = 259

 Score =  229 bits (583), Expect = 6e-58
 Identities = 121/180 (67%), Positives = 135/180 (75%), Gaps = 2/180 (1%)
 Frame = -3

Query: 724 EWVQNIPPIQXXXXXXXXXXXXXXXXXXXXFNRKTSNTIVLTGLNGSGKTYLFFQLRDGT 545
           EW   +P  Q                    F R  SNT+VLTGL+GSGKT LF+QL+DG+
Sbjct: 20  EWFHQMPETQLYAAIAVVFVTTFFLLSIRLFKRTKSNTVVLTGLSGSGKTTLFYQLQDGS 79

Query: 544 VYQGTVTSMQHNEDSFVLHSEITKKGKTKPVHVVDVPGGTQT--KLDEFLPQAAGVVFVV 371
            + GTVTSM  NE +FVLHSEI KKGK KPVHVVDVPG ++   KLDEFLPQAAG+VFVV
Sbjct: 80  SHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVVDVPGHSRLRPKLDEFLPQAAGIVFVV 139

Query: 370 DAVEFLPKARAVSEYLYDILTKASVVKKSIPVLILCNKVDKVTAHTKEFIRKQLEKEIEQ 191
           DA+EFLP  RA SEYLYDILTK+SVVKK IPVLILCNK DKVTAHTKEFIRKQLEKEIE+
Sbjct: 140 DALEFLPNCRAASEYLYDILTKSSVVKKKIPVLILCNKTDKVTAHTKEFIRKQLEKEIEK 199


>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
           [Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
           recognition particle receptor subunit beta, putative
           [Ricinus communis]
          Length = 259

 Score =  229 bits (583), Expect = 6e-58
 Identities = 120/180 (66%), Positives = 137/180 (76%), Gaps = 2/180 (1%)
 Frame = -3

Query: 724 EWVQNIPPIQXXXXXXXXXXXXXXXXXXXXFNRKTSNTIVLTGLNGSGKTYLFFQLRDGT 545
           E+   IPP Q                    F R  SNTIVLTGL+GSGKT LF+QLRDG+
Sbjct: 20  EFANQIPPAQLYAAAAVLLITTLFLLIIRFFRRTKSNTIVLTGLSGSGKTVLFYQLRDGS 79

Query: 544 VYQGTVTSMQHNEDSFVLHSEITKKGKTKPVHVVDVPGGTQ--TKLDEFLPQAAGVVFVV 371
            +QGTVTSM+ NE +F+LHSE +KKGK KPVH VDVPG ++  +KLDEFLPQAAG+VFVV
Sbjct: 80  SHQGTVTSMEQNEGTFILHSENSKKGKLKPVHFVDVPGHSRLRSKLDEFLPQAAGIVFVV 139

Query: 370 DAVEFLPKARAVSEYLYDILTKASVVKKSIPVLILCNKVDKVTAHTKEFIRKQLEKEIEQ 191
           DA+EFLP  R VSEYLYDILTKASVVK+ IPVLI CNK DKVTAHTKEFIRKQLEKEI++
Sbjct: 140 DALEFLPNLRGVSEYLYDILTKASVVKRKIPVLICCNKTDKVTAHTKEFIRKQLEKEIDK 199


>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  228 bits (581), Expect = 1e-57
 Identities = 116/180 (64%), Positives = 138/180 (76%), Gaps = 2/180 (1%)
 Frame = -3

Query: 724 EWVQNIPPIQXXXXXXXXXXXXXXXXXXXXFNRKTSNTIVLTGLNGSGKTYLFFQLRDGT 545
           ++++ +PP Q                    F R  +NT+VLTGL GSGKT LF+QLRDG+
Sbjct: 20  DYLRQVPPEQLYIAAAIAVFTTLLLLSLRLFKRAKTNTVVLTGLTGSGKTVLFYQLRDGS 79

Query: 544 VYQGTVTSMQHNEDSFVLHSEITKKGKTKPVHVVDVPGGTQT--KLDEFLPQAAGVVFVV 371
            +QGTVTSM+ NE +F+LHSE TKKGK KPVH+VDVPG ++   KLDE+LPQAAGVVFVV
Sbjct: 80  THQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSRLRPKLDEYLPQAAGVVFVV 139

Query: 370 DAVEFLPKARAVSEYLYDILTKASVVKKSIPVLILCNKVDKVTAHTKEFIRKQLEKEIEQ 191
           DAV+FLP  RA SEYLYDILTK SVVKK IP+LILCNK DKVTAHTKEFIR+QLEKEI++
Sbjct: 140 DAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHTKEFIRRQLEKEIDK 199


>ref|XP_004135257.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Cucumis sativus]
          Length = 266

 Score =  227 bits (579), Expect = 2e-57
 Identities = 119/180 (66%), Positives = 138/180 (76%), Gaps = 2/180 (1%)
 Frame = -3

Query: 724 EWVQNIPPIQXXXXXXXXXXXXXXXXXXXXFNRKTSNTIVLTGLNGSGKTYLFFQLRDGT 545
           E+V  IPPIQ                    F R+ SNTIVL+GL+GSGKT LF+QLRDG+
Sbjct: 27  EFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVLSGLSGSGKTILFYQLRDGS 86

Query: 544 VYQGTVTSMQHNEDSFVLHSEITKKGKTKPVHVVDVPGGTQ--TKLDEFLPQAAGVVFVV 371
            +QGTVTSM+ NE +FVLHSEI KK K KPVH+VDVPG ++   KLD+FLPQAAGVVFVV
Sbjct: 87  SHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVV 146

Query: 370 DAVEFLPKARAVSEYLYDILTKASVVKKSIPVLILCNKVDKVTAHTKEFIRKQLEKEIEQ 191
           DA++FLP  RA SEYLYDILT ASVVKK IPVLILCNK DKVTAHTKEFI +Q+EKEI++
Sbjct: 147 DALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDK 206


>gb|ADN33824.1| signal recognition particle receptor subunit beta [Cucumis melo
           subsp. melo]
          Length = 266

 Score =  227 bits (579), Expect = 2e-57
 Identities = 119/180 (66%), Positives = 138/180 (76%), Gaps = 2/180 (1%)
 Frame = -3

Query: 724 EWVQNIPPIQXXXXXXXXXXXXXXXXXXXXFNRKTSNTIVLTGLNGSGKTYLFFQLRDGT 545
           E+V  IPPIQ                    F R+ SNTIVL+GL+GSGKT LF+QLRDG+
Sbjct: 27  EFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRRKSNTIVLSGLSGSGKTILFYQLRDGS 86

Query: 544 VYQGTVTSMQHNEDSFVLHSEITKKGKTKPVHVVDVPGGTQ--TKLDEFLPQAAGVVFVV 371
            +QGTVTSM+ NE +FVLHSEI KK K KPVH+VDVPG ++   KLD+FLPQAAGVVFVV
Sbjct: 87  SHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVV 146

Query: 370 DAVEFLPKARAVSEYLYDILTKASVVKKSIPVLILCNKVDKVTAHTKEFIRKQLEKEIEQ 191
           DA++FLP  RA SEYLYDILT ASVVKK IPVLILCNK DKVTAHTKEFI +Q+EKEI++
Sbjct: 147 DALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDK 206


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