BLASTX nr result

ID: Bupleurum21_contig00024486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024486
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA25905.1| polycomb-like protein [Daucus carota]                  68   7e-10
ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis...    62   6e-08
ref|XP_003573876.1| PREDICTED: probable chromo domain-containing...    58   9e-07
dbj|BAJ95567.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   9e-07
dbj|BAK01519.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   9e-07

>dbj|BAA25905.1| polycomb-like protein [Daucus carota]
          Length = 392

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 11/85 (12%)
 Frame = -3

Query: 347 WVGWPESENTWEPFEHLESCAEDVEAFEQRQRGKNKSGQKR-------KPCQNRQT--PT 195
           W GWPES NTWEP EHLE+  + V+AFEQRQ GK+KS +++          + RQ+  PT
Sbjct: 76  WRGWPESANTWEPVEHLEAVPDVVDAFEQRQSGKHKSSKRKGRPGGSTSQAKRRQSTAPT 135

Query: 194 MNVE--KEPSSIPDNRNNASHDDYD 126
           ++V+  ++ S IP N  ++ ++  D
Sbjct: 136 VSVDLVQDHSPIPYNNGDSLNNGMD 160


>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
           gi|296090196|emb|CBI40015.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -3

Query: 347 WVGWPESENTWEPFEHLESCAEDVEAFEQRQRGK-NKSGQKRKPCQNRQTPTMNVEKEPS 171
           W GWPE+ NTWEP E+L++C++ ++AFE R R K N+S +KRK        T+  +K+  
Sbjct: 117 WRGWPENANTWEPLENLQACSDVIDAFEDRLRSKRNRSSRKRKRKSGGSAQTLPKKKQQR 176

Query: 170 SIPDN 156
           S   N
Sbjct: 177 SGASN 181


>ref|XP_003573876.1| PREDICTED: probable chromo domain-containing protein LHP1-like
           [Brachypodium distachyon]
          Length = 416

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/37 (64%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
 Frame = -3

Query: 347 WVGWPESENTWEPFEHLESCAEDVEAFEQRQR-GKNK 240
           W GWPES NTWEPFE+L++C++ V+AFE+RQ+ GK K
Sbjct: 125 WRGWPESANTWEPFENLKACSDFVDAFEKRQQNGKRK 161


>dbj|BAJ95567.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = -3

Query: 347 WVGWPESENTWEPFEHLESCAEDVEAFEQRQRGKNKSGQKRK 222
           W GWPES NTWEP E+L +C++ V+AFE+RQ+ ++   +KRK
Sbjct: 108 WRGWPESANTWEPAENLRACSDFVDAFEKRQQPRSYGKRKRK 149


>dbj|BAK01519.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 295

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = -3

Query: 347 WVGWPESENTWEPFEHLESCAEDVEAFEQRQRGKNKSGQKRK 222
           W GWPES NTWEP E+L +C++ V+AFE+RQ+ ++   +KRK
Sbjct: 6   WRGWPESANTWEPAENLRACSDFVDAFEKRQQPRSYGKRKRK 47


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