BLASTX nr result

ID: Bupleurum21_contig00024484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024484
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530585.1| nascent polypeptide associated complex alpha...   101   2e-19
ref|NP_001175243.1| Os07g0543200 [Oryza sativa Japonica Group] g...    61   3e-07
gb|AAG46156.1|AC018727_8 putative Mutator protein [Oryza sativa ...    60   5e-07
gb|ABA99292.1| Transposable element protein, putative, MuDR [Ory...    60   7e-07
gb|ABA93972.1| transposon protein, putative, Mutator sub-class [...    60   7e-07

>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 687

 Score =  101 bits (252), Expect = 2e-19
 Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
 Frame = +1

Query: 139 NEAGTNSISARRGRSTRPDGEPRRSEAGTNSTRARRSVTHPGDEPXXXXXXXXXXXXXHD 318
           ++A  ++++ +      P+G  R   AG + TR + ++                      
Sbjct: 148 SKAKLDALAKKGHGGDHPNGSKRVRRAGFHRTRTKLAIR--------------------- 186

Query: 319 SNSVEGGRNKPLLSNLESHPSANSRAGDGPSLRNLNLRGAWPRAHALYRGADDGYKQLFV 498
            N     +  PLL+ L+SHPS   R G      NL  +  W RA  +   A   YK+L +
Sbjct: 187 -NQRHAVQPTPLLTGLKSHPSIYIRLGQRLPESNLVSQNNWTRAFKICSNAAVEYKRLLL 245

Query: 499 RAGFENFLDIQPITLPQA-YTLALMERWFCETNTLHLPCGEIGPTPVDWTMVTGLCFEGQ 675
            AGF +FL IQP  +    Y  AL+ER+F ET+TLHL   EIGPTP+ WTM+TG+ F G 
Sbjct: 246 DAGFGDFLSIQPFRINSGGYMSALVERYFSETHTLHLGTFEIGPTPLAWTMITGITFGGD 305

Query: 676 TITFSSGFTMDRALELLG----AGRGAISEGKI 762
            +      T +  ++LLG       G  S+GK+
Sbjct: 306 PLN-PPDITPEECIKLLGLVGTESEGFFSQGKL 337


>ref|NP_001175243.1| Os07g0543200 [Oryza sativa Japonica Group]
           gi|255677861|dbj|BAH93971.1| Os07g0543200 [Oryza sativa
           Japonica Group]
          Length = 1429

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
 Frame = +1

Query: 403 GPSLRNLNLRGAWPRAHALYRGADDGYKQLFVRAGFENFLDI--QPITLPQAYTL-ALME 573
           G  L+ L +RG    AH L+   DD Y     RA    F+ +  +P+ L  A  L AL++
Sbjct: 339 GERLKTLRVRGH--TAHILF---DDRYVPYLRRAKLLAFVTMAQRPVPLYNAAALTALVD 393

Query: 574 RWFCETNTLHLPCGEIGPTPVDWTMVTGLCFEGQTITFSSGFTMDRALELLG 729
           RW  ET+T HLPCGE+  T  D  M+ GL   GQ +T +SG   +R  E LG
Sbjct: 394 RWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVT-ASGNWRERVEEYLG 444


>gb|AAG46156.1|AC018727_8 putative Mutator protein [Oryza sativa Japonica Group]
          Length = 1456

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
 Frame = +1

Query: 403  GPSLRNLNLRGAWPRAHALYRGADDGYKQLFVRAGFENFLDI--QPITLPQAYTL-ALME 573
            G  L+ L +RG    AH L+   DD Y     RA    F+ +  +P+ L  A  L AL++
Sbjct: 848  GERLKTLRVRGH--TAHILF---DDWYVPYLQRAKLLAFVTMAQRPVPLYNAAALTALVD 902

Query: 574  RWFCETNTLHLPCGEIGPTPVDWTMVTGLCFEGQTIT--FSSGFTMDRALELLG 729
            RW  ET+T HLPCGE+  T  D  M+ GL   GQ +T   +SG   +R  E LG
Sbjct: 903  RWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERVEEYLG 956


>gb|ABA99292.1| Transposable element protein, putative, MuDR [Oryza sativa Japonica
           Group]
          Length = 1847

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
 Frame = +1

Query: 403 GPSLRNLNLRGAWPRAHALYRGADDGYKQLFVRAGFENFLDI--QPITLPQAYTL-ALME 573
           G  L+ L +RG    AH L+   DD Y     RA    F+ +  +P+ L  A  L AL++
Sbjct: 582 GERLKTLRVRGH--TAHILF---DDRYVPYLRRAKLLAFVTMAQRPVPLYNAAALTALVD 636

Query: 574 RWFCETNTLHLPCGEIGPTPVDWTMVTGLCFEGQTIT--FSSGFTMDRALELLG 729
           RW  ET+T HLPCGE+  T  D  M+ GL   GQ +T   +SG   +R  E LG
Sbjct: 637 RWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERVEEYLG 690


>gb|ABA93972.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 1385

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
 Frame = +1

Query: 403 GPSLRNLNLRGAWPRAHALYRGADDGYKQLFVRAGFENFLDI--QPITLPQAYTL-ALME 573
           G  L+ L +RG    AH L+   DD Y     RA    F+ +  +P+ L  A  L AL++
Sbjct: 637 GERLKTLRVRGH--TAHILF---DDRYVPYLRRAKLLAFVTMAQRPVPLYNAAALTALVD 691

Query: 574 RWFCETNTLHLPCGEIGPTPVDWTMVTGLCFEGQTIT--FSSGFTMDRALELLG 729
           RW  ET+T HLPCGE+  T  D  M+ GL   GQ +T   +SG   +R  E LG
Sbjct: 692 RWRPETHTFHLPCGELTVTLEDVAMILGLPIRGQAVTGDTASGNWRERVEEYLG 745


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