BLASTX nr result

ID: Bupleurum21_contig00024481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024481
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66599.1| hypothetical protein VITISV_039272 [Vitis vinifera]    62   6e-08
gb|AFU25704.1| gag-pol precursor [Castanea mollissima]                 61   1e-07
ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854...    60   2e-07
emb|CAN62152.1| hypothetical protein VITISV_032404 [Vitis vinifera]    60   2e-07
emb|CAN79601.1| hypothetical protein VITISV_015421 [Vitis vinifera]    60   3e-07

>emb|CAN66599.1| hypothetical protein VITISV_039272 [Vitis vinifera]
          Length = 441

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = +1

Query: 154 FRKPTPMKSDASRRNPKRYCAYHEDIGHDTSECRQLRDEIEDLIKKGQLTEWVVQKVKDL 333
           FR P P+++D S+R+  + C YH++ GH T  CR L   +E LIK G L ++++  V+ +
Sbjct: 174 FRWPGPLRTDPSKRDHSKICVYHKEHGHTTEACRSLHYFVERLIKAGHLKQYLLSNVR-V 232

Query: 334 RKESEDKRPESNK-GKEPVHTIRMIYGGP-HIAGTSRNARHRYIDEA 468
           R  S +    ++K    P   I  I+GGP      SR  R R +  A
Sbjct: 233 RDTSRNHNSGTSKIPAAPKAAINYIHGGPLDEEYDSRRKRQRLLQAA 279


>gb|AFU25704.1| gag-pol precursor [Castanea mollissima]
          Length = 428

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +1

Query: 112 PIDHIFAVTNGQGVFRKPTPMKSDASRRNPKRYCAYHEDIGHDTSECRQLRDEIEDLIKK 291
           PI HI      +  FR P  M  +AS RN   +C YH+D GH T +CR LRD +  L K 
Sbjct: 237 PIHHILEKIWHEPYFRPPNKMSGNASTRNQNLHCHYHQDKGHTTEDCRTLRDHLNQLAKA 296

Query: 292 GQLTEWVVQ 318
           G++  ++ +
Sbjct: 297 GKINHFLAR 305


>ref|XP_003633313.1| PREDICTED: uncharacterized protein LOC100854367 [Vitis vinifera]
          Length = 955

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +1

Query: 97  TNLVAPIDHIFAVTNGQGVFRKPTPMKSDASRRNPKRYCAYHEDIGHDTSECRQLRDEIE 276
           T L    + +  V      FR P P++S+  +RN  + CAYH+D GH    CR L   +E
Sbjct: 290 TPLTLTYEKLLPVVRELPGFRWPGPIRSNPMKRNRSKKCAYHKDHGHTAEACRSLHLLVE 349

Query: 277 DLIKKGQLTEWVVQKVKDLRKESEDKRPESNKGK-EPVHT-IRMIYGGP 417
           +L+K+G L ++    V+   K  E  R    +G   PV   I  I+GGP
Sbjct: 350 NLLKEGHLKQY----VRAATKSGEPSRDHGLRGPIAPVRAIINYIHGGP 394


>emb|CAN62152.1| hypothetical protein VITISV_032404 [Vitis vinifera]
          Length = 660

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
 Frame = +1

Query: 97  TNLVAPIDHIFAVTNGQGVFRKPTPMKSDASRRNPKRYCAYHEDIGHDTSECRQLRDEIE 276
           T L    + +  V      FR P P++S+  +RN  + CAYH+D GH    CR L   +E
Sbjct: 379 TPLTLTYEKLLPVVRKLPGFRWPGPIRSNPMKRNRSKKCAYHKDHGHTAEACRSLHLLVE 438

Query: 277 DLIKKGQLTEWVVQKVKDLRKESEDKRPESNKGK-EPVHT-IRMIYGGP 417
           +L+K+G L ++    V+   K  E  R    +G   PV   I  I+GGP
Sbjct: 439 NLLKEGHLKQY----VRAATKSGEPSRDHGLRGPIAPVRAIINYIHGGP 483


>emb|CAN79601.1| hypothetical protein VITISV_015421 [Vitis vinifera]
          Length = 505

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
 Frame = +1

Query: 100 NLVAPIDHIFAVTNGQGV--FRKPTPMKSDASRRNPKRYCAYHEDIGHDTSECRQLRDEI 273
           NL    DH      GQG+  F+ P P+++D S R+  R CA+H+D GH T  CR L+  +
Sbjct: 185 NLQTSQDHPTGGRKGQGLSDFKWPRPIETDPSTRDRSRRCAFHKDHGHTTETCRALQYLV 244

Query: 274 EDLIKKGQLTEWVVQKVKDLRKESEDKRPESNKGKEPVHTIRMIYGGP 417
           E LIK G L +++    +                  P   I  I GGP
Sbjct: 245 ERLIKAGHLKQYLRSDTRGRDVPQHHNPGAPRAPAAPKVVINYINGGP 292


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