BLASTX nr result

ID: Bupleurum21_contig00024480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024480
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616539.1| hypothetical protein MTR_5g081560 [Medicago ...   124   2e-26
gb|ABK94615.1| unknown [Populus trichocarpa]                          123   3e-26
ref|XP_004138437.1| PREDICTED: uncharacterized protein LOC101207...   121   1e-25
ref|XP_002298332.1| predicted protein [Populus trichocarpa] gi|1...   120   2e-25
ref|NP_196202.1| RING/FYVE/PHD zinc finger-containing protein [A...   119   5e-25

>ref|XP_003616539.1| hypothetical protein MTR_5g081560 [Medicago truncatula]
           gi|355517874|gb|AES99497.1| hypothetical protein
           MTR_5g081560 [Medicago truncatula]
          Length = 211

 Score =  124 bits (310), Expect = 2e-26
 Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 4/165 (2%)
 Frame = +1

Query: 148 SGEDDRSLEITRNLEMDLECGKLEIEVEQHICYGDEKMNDTDIMERICRICHMNL-MEEP 324
           S + D S E   ++E+DL+ G +  +V+ H+          D +ER CRICH+++ M   
Sbjct: 51  SCDSDGSSESECSVELDLDGGGVVSDVKVHL----------DKVERDCRICHLSMDMTNH 100

Query: 325 CCGVAIELKCYCKGDLAAAHQHCADTWFNIRGNRRCEICGSIAHYVS---KEEHRKDYTN 495
             G+ +EL C+CK DLAAAH+HCA+ WF I+GN+ CEICGSIAH V+   + +  + +  
Sbjct: 101 ESGIPMELGCFCKNDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVAGAIEVQMTEQFNE 160

Query: 496 SERQTLEEAFTTAPEIQDEARRNKFGRRIMNFLLTCMILAFIVSW 630
           S   ++     T P    E R    G R +NFLL CM+ AF++SW
Sbjct: 161 SSDPSIVP--PTGPSPPSETRNFWQGHRFLNFLLACMVFAFVISW 203


>gb|ABK94615.1| unknown [Populus trichocarpa]
          Length = 183

 Score =  123 bits (309), Expect = 3e-26
 Identities = 78/172 (45%), Positives = 101/172 (58%), Gaps = 4/172 (2%)
 Frame = +1

Query: 127 SDSGLSFSGE--DDRSLEITRNL-EMDLECGKLEIEVEQHICYGDEKMNDTDIMERICRI 297
           S S +S SGE    R+  ++  L E+DLE G L++EV  H+   D K       +R CRI
Sbjct: 18  SSSEISLSGEIGAHRNSSVSDCLSEVDLESGGLDMEV--HL---DNKT------QRDCRI 66

Query: 298 CHMNL-MEEPCCGVAIELKCYCKGDLAAAHQHCADTWFNIRGNRRCEICGSIAHYVSKEE 474
           CH+ L   E  CGVAIEL C CKGDL AAH+ CA+TWF I+GN  CEICG+ A  V+ E+
Sbjct: 67  CHLGLETREQECGVAIELGCSCKGDLGAAHKKCAETWFKIKGNTTCEICGATALGVAGEQ 126

Query: 475 HRKDYTNSERQTLEEAFTTAPEIQDEARRNKFGRRIMNFLLTCMILAFIVSW 630
             + +  S       A    P I  E R     RR+MNFLL CM++AF++SW
Sbjct: 127 TNEAHNASAAVLSAPA---VPLILVETRAFWHSRRLMNFLLACMVMAFVISW 175


>ref|XP_004138437.1| PREDICTED: uncharacterized protein LOC101207404 [Cucumis sativus]
           gi|449519601|ref|XP_004166823.1| PREDICTED:
           uncharacterized LOC101207404 [Cucumis sativus]
          Length = 215

 Score =  121 bits (304), Expect = 1e-25
 Identities = 69/156 (44%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
 Frame = +1

Query: 184 NLEMDLECGKLEIEVEQHICYGDEKMNDTDIMERICRICHMNL-MEEPCCGVAIELKCYC 360
           ++EMDLECG  EI+V  H+            +E+ CRICH++L       G+ IEL C C
Sbjct: 65  SVEMDLECGLAEIKV--HLAK----------IEKDCRICHLSLDASNHESGIPIELGCSC 112

Query: 361 KGDLAAAHQHCADTWFNIRGNRRCEICGSIAHYVSKEEHRKDYTNSERQTLEEAFTTA-- 534
           K DLAAAH+HCA+ WF I+G+  CEICGSIAH V+   +  D T    +  E    TA  
Sbjct: 113 KDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVT-GTYEADSTEQRNEPNEATTATATA 171

Query: 535 ----PEIQDEARRNKFGRRIMNFLLTCMILAFIVSW 630
               P    EAR    G R +NFLL CM+ AF++SW
Sbjct: 172 AIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISW 207


>ref|XP_002298332.1| predicted protein [Populus trichocarpa] gi|118482966|gb|ABK93395.1|
           unknown [Populus trichocarpa]
           gi|222845590|gb|EEE83137.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  120 bits (302), Expect = 2e-25
 Identities = 76/172 (44%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
 Frame = +1

Query: 127 SDSGLSFSGE---DDRSLEITRNLEMDLECGKLEIEVEQHICYGDEKMNDTDIMERICRI 297
           S S +S SGE      S E     E+DLE G L++EV     + D K       +R CRI
Sbjct: 17  SSSDISLSGEIGAHRNSSESDCLSEVDLESGALDMEV-----HSDNKT------QRDCRI 65

Query: 298 CHMNL-MEEPCCGVAIELKCYCKGDLAAAHQHCADTWFNIRGNRRCEICGSIAHYVSKEE 474
           CH+ L   E  CG AIEL C CKGDL AAH+ CA+TWF I+GN  CEICG+ A  V+ E+
Sbjct: 66  CHLGLETSEQECGGAIELGCSCKGDLGAAHKKCAETWFKIKGNTTCEICGATALGVAGEQ 125

Query: 475 HRKDYTNSERQTLEEAFTTAPEIQDEARRNKFGRRIMNFLLTCMILAFIVSW 630
               +  S       A    P I  E +     RRIMNFLL CM++AF++SW
Sbjct: 126 TNVPHNASAAVLSAPA---GPLILVETQTFWHSRRIMNFLLACMVVAFVISW 174


>ref|NP_196202.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
           gi|9759108|dbj|BAB09677.1| unnamed protein product
           [Arabidopsis thaliana] gi|30102534|gb|AAP21185.1|
           At5g05830 [Arabidopsis thaliana]
           gi|110743253|dbj|BAE99517.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003547|gb|AED90930.1|
           RING/FYVE/PHD zinc finger-containing protein
           [Arabidopsis thaliana]
          Length = 204

 Score =  119 bits (298), Expect = 5e-25
 Identities = 76/189 (40%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
 Frame = +1

Query: 106 LSATLKDSDSGLSFSGEDDRSL-------EITRNLEMDLECGKLEIEVEQHICYGDEKMN 264
           +S  + +S SG    GE  RS        EI ++ E         +E++  +    EK+ 
Sbjct: 12  VSVKVINSSSGCDGDGEPRRSSGAVEKEEEIVKDEERRSNASVCSVEIDLELGL-PEKVV 70

Query: 265 DTDIMERICRICHMNLMEEPC-CGVAIELKCYCKGDLAAAHQHCADTWFNIRGNRRCEIC 441
                ER CRICHM+L       GV IEL C CK DLAAAH+HCA+TWF I+GN+ CE+C
Sbjct: 71  HLSQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVC 130

Query: 442 GSIAH------YVSKEEHRKDYTNSERQTLEEAFTTAPEIQDEARRNKFGRRIMNFLLTC 603
           GSIA        V  EE R +    E  TL    T+ P +  E R    G R +NFLL C
Sbjct: 131 GSIAGNVVGSVEVESEESRNEANGVENLTLR---TSGPRLV-EGRSFWQGHRFLNFLLAC 186

Query: 604 MILAFIVSW 630
           M+ AF++SW
Sbjct: 187 MVFAFVISW 195


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