BLASTX nr result

ID: Bupleurum21_contig00024461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024461
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512269.1| ATP binding protein, putative [Ricinus commu...   108   5e-22
ref|XP_004157277.1| PREDICTED: LOW QUALITY PROTEIN: kinesin-like...   108   7e-22
ref|XP_004135657.1| PREDICTED: kinesin-like protein KIFC3-like [...   108   7e-22
ref|XP_002319046.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
dbj|BAB40709.1| BY-2 kinesin-like protein 5 [Nicotiana tabacum]       103   2e-20

>ref|XP_002512269.1| ATP binding protein, putative [Ricinus communis]
           gi|223548230|gb|EEF49721.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 499

 Score =  108 bits (271), Expect = 5e-22
 Identities = 65/139 (46%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
 Frame = -2

Query: 587 TPQISETPIPKSVVKSAPRFMSSTAASRQRHTIAQIEVKGMARSLRSGTRTSIQVSSSRS 408
           TP I+ET   +S++ S PRFM+ST ASRQR ++A+ E+   A S RSG+R+S+Q  +S+S
Sbjct: 368 TPSITETRTKRSLITSLPRFMTSTVASRQRQSVAEKEIVRKAGSFRSGSRSSVQFLASQS 427

Query: 407 LGYSDPSFKAFLKHPNKKSRYGETNVSGTEVTGDTSVAATDIAICSVPLAVTRAK-IGSS 231
           L YSD   K  L+   KKSRY E     T  T       TD+   ++P    R+K + SS
Sbjct: 428 LSYSDFRLKTLLRDSKKKSRYAEAK---TIATQSLKCNDTDLRTATLP----RSKMVTSS 480

Query: 230 DSNLRVTLHRHRRRMSALM 174
           D NLR+TL RHRRRMS L+
Sbjct: 481 DPNLRITLCRHRRRMSDLI 499


>ref|XP_004157277.1| PREDICTED: LOW QUALITY PROTEIN: kinesin-like protein KIFC3-like
           [Cucumis sativus]
          Length = 607

 Score =  108 bits (270), Expect = 7e-22
 Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
 Frame = -2

Query: 587 TPQISETPIPKSVVKSAPRFMSSTAASRQRHTIAQIE-VKGMARSLRSGTRTSIQVSSSR 411
           TP+ S+ P    +  S PRFM+ST ASRQR T A+ + V G  +SLR G R+S+Q SSS+
Sbjct: 467 TPRKSKVPSKAIISNSLPRFMTSTMASRQRQTAAENKIVMGRVKSLRFGARSSVQFSSSQ 526

Query: 410 SLGYSDPSFKAFLKHPNKKSRYGETNVSGTEVTG-DTSVAATDIAICSVPLAVTRAK-IG 237
           S+ YSD   +A L+  NKKSRY E +   TE    + S    D    S+PL + ++K + 
Sbjct: 527 SISYSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNGSEPKKDPLPLSLPLPLPQSKMVT 586

Query: 236 SSDSNLRVTLHRHRRRMSALM 174
           SSDSNLRVTL RHRRRMS L+
Sbjct: 587 SSDSNLRVTLSRHRRRMSDLI 607


>ref|XP_004135657.1| PREDICTED: kinesin-like protein KIFC3-like [Cucumis sativus]
          Length = 607

 Score =  108 bits (270), Expect = 7e-22
 Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
 Frame = -2

Query: 587 TPQISETPIPKSVVKSAPRFMSSTAASRQRHTIAQIE-VKGMARSLRSGTRTSIQVSSSR 411
           TP+ S+ P    +  S PRFM+ST ASRQR T A+ + V G  +SLR G R+S+Q SSS+
Sbjct: 467 TPRKSKVPSKAIISNSLPRFMTSTMASRQRQTAAENKIVMGRVKSLRFGARSSVQFSSSQ 526

Query: 410 SLGYSDPSFKAFLKHPNKKSRYGETNVSGTEVTG-DTSVAATDIAICSVPLAVTRAK-IG 237
           S+ YSD   +A L+  NKKSRY E +   TE    + S    D    S+PL + ++K + 
Sbjct: 527 SISYSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNGSEPKKDPLPLSLPLPLPQSKMVT 586

Query: 236 SSDSNLRVTLHRHRRRMSALM 174
           SSDSNLRVTL RHRRRMS L+
Sbjct: 587 SSDSNLRVTLSRHRRRMSDLI 607


>ref|XP_002319046.1| predicted protein [Populus trichocarpa] gi|222857422|gb|EEE94969.1|
           predicted protein [Populus trichocarpa]
          Length = 637

 Score =  105 bits (263), Expect = 4e-21
 Identities = 63/138 (45%), Positives = 87/138 (63%)
 Frame = -2

Query: 587 TPQISETPIPKSVVKSAPRFMSSTAASRQRHTIAQIEVKGMARSLRSGTRTSIQVSSSRS 408
           T ++++  I +++    PRFM+ST ASRQR + A+  V G ARSLRS TR+S+Q S+S+S
Sbjct: 506 TSRVTDKGIRRNMTSPFPRFMTSTVASRQRQSAAEKLVVGRARSLRSATRSSLQFSASQS 565

Query: 407 LGYSDPSFKAFLKHPNKKSRYGETNVSGTEVTGDTSVAATDIAICSVPLAVTRAKIGSSD 228
             YS+  F+A LK  N+KSRYGET     E          ++ + S+P + T   + SSD
Sbjct: 566 FSYSEFRFRAILKESNRKSRYGETKPLLPE---SPKCNGPEMKMASLPRSKT---VISSD 619

Query: 227 SNLRVTLHRHRRRMSALM 174
            NLR TL RHRRRMS L+
Sbjct: 620 PNLRTTLSRHRRRMSDLI 637


>dbj|BAB40709.1| BY-2 kinesin-like protein 5 [Nicotiana tabacum]
          Length = 633

 Score =  103 bits (258), Expect = 2e-20
 Identities = 63/138 (45%), Positives = 82/138 (59%)
 Frame = -2

Query: 587 TPQISETPIPKSVVKSAPRFMSSTAASRQRHTIAQIEVKGMARSLRSGTRTSIQVSSSRS 408
           TP+ SE  +   V  S PRFMS+T ASRQR + A+ E+    +SLRS  R+S Q+S S+S
Sbjct: 501 TPRNSEKGLKTKVTSSVPRFMSATVASRQRESTAEREIHSRPKSLRSWARSSTQLSGSQS 560

Query: 407 LGYSDPSFKAFLKHPNKKSRYGETNVSGTEVTGDTSVAATDIAICSVPLAVTRAKIGSSD 228
             +SD  FKA L+  NK+SRY ETN     + GD     +DI    +P   ++  I SSD
Sbjct: 561 NSFSDRRFKAQLRTSNKRSRYSETNT----IAGDIKCDDSDIKPSVLPQPQSKT-IASSD 615

Query: 227 SNLRVTLHRHRRRMSALM 174
              RVTL  HRRRMS L+
Sbjct: 616 PKPRVTLPHHRRRMSDLL 633


Top