BLASTX nr result

ID: Bupleurum21_contig00024457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024457
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282711.2| PREDICTED: probable LRR receptor-like serine...   241   6e-62
emb|CBI21051.3| unnamed protein product [Vitis vinifera]              241   6e-62
ref|XP_002515504.1| ATP binding protein, putative [Ricinus commu...   239   3e-61
emb|CAD41800.2| OSJNBa0008M17.16 [Oryza sativa Japonica Group]        188   6e-46
ref|XP_003581672.1| PREDICTED: probable LRR receptor-like serine...   187   8e-46

>ref|XP_002282711.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 889

 Score =  241 bits (615), Expect = 6e-62
 Identities = 125/187 (66%), Positives = 146/187 (78%)
 Frame = -1

Query: 564 QLSKMQYLSLGINNLTGPVPPELGDLNRLVSLSISSNSFHGNLPTELGKLTSLEQLYIDS 385
           QLS +QYLSLGINNLTG VP ELG+L +LVSLS  SN+F G LP ELG LTSL+QLYIDS
Sbjct: 360 QLSNLQYLSLGINNLTGRVPSELGNLTKLVSLSFGSNNFFGPLPKELGNLTSLQQLYIDS 419

Query: 384 SGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGTNLEGPIPLSFI 205
           SG+SGPIPQE + LK L  +WASDNLF GKLPEF+G L  L+ LR+EGT LEGPIP SF 
Sbjct: 420 SGVSGPIPQEFAGLKSLQILWASDNLFTGKLPEFIGTLIELRDLRVEGTLLEGPIPSSFG 479

Query: 204 ALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPKQLNSFSNLKILDLSF 25
           ALTKLEDLRIGDL  +DSSLDFLG+ T            SG++P QL++F+ LK LDLSF
Sbjct: 480 ALTKLEDLRIGDLRGQDSSLDFLGSQTSLSILSLRNCRVSGRIPDQLSTFTKLKYLDLSF 539

Query: 24  NKLSGQV 4
           NKL+G++
Sbjct: 540 NKLTGEI 546


>emb|CBI21051.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  241 bits (615), Expect = 6e-62
 Identities = 125/187 (66%), Positives = 146/187 (78%)
 Frame = -1

Query: 564 QLSKMQYLSLGINNLTGPVPPELGDLNRLVSLSISSNSFHGNLPTELGKLTSLEQLYIDS 385
           QLS +QYLSLGINNLTG VP ELG+L +LVSLS  SN+F G LP ELG LTSL+QLYIDS
Sbjct: 120 QLSNLQYLSLGINNLTGRVPSELGNLTKLVSLSFGSNNFFGPLPKELGNLTSLQQLYIDS 179

Query: 384 SGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGTNLEGPIPLSFI 205
           SG+SGPIPQE + LK L  +WASDNLF GKLPEF+G L  L+ LR+EGT LEGPIP SF 
Sbjct: 180 SGVSGPIPQEFAGLKSLQILWASDNLFTGKLPEFIGTLIELRDLRVEGTLLEGPIPSSFG 239

Query: 204 ALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPKQLNSFSNLKILDLSF 25
           ALTKLEDLRIGDL  +DSSLDFLG+ T            SG++P QL++F+ LK LDLSF
Sbjct: 240 ALTKLEDLRIGDLRGQDSSLDFLGSQTSLSILSLRNCRVSGRIPDQLSTFTKLKYLDLSF 299

Query: 24  NKLSGQV 4
           NKL+G++
Sbjct: 300 NKLTGEI 306


>ref|XP_002515504.1| ATP binding protein, putative [Ricinus communis]
           gi|223545448|gb|EEF46953.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 895

 Score =  239 bits (609), Expect = 3e-61
 Identities = 125/188 (66%), Positives = 145/188 (77%)
 Frame = -1

Query: 564 QLSKMQYLSLGINNLTGPVPPELGDLNRLVSLSISSNSFHGNLPTELGKLTSLEQLYIDS 385
           QLS MQYLSLGINNLTG VPPELG+L +L+SLS SSN+F G LPTELG LTSL+QLYIDS
Sbjct: 366 QLSNMQYLSLGINNLTGQVPPELGNLTKLLSLSFSSNNFFGPLPTELGNLTSLQQLYIDS 425

Query: 384 SGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGTNLEGPIPLSFI 205
           SG+SG IPQE+  LK L  +WASDN F GKLPEF G LT LK LRL+GT LEGPIP SF 
Sbjct: 426 SGVSGSIPQEVKQLKSLQILWASDNRFTGKLPEFFGALTALKVLRLQGTLLEGPIPSSFS 485

Query: 204 ALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPKQLNSFSNLKILDLSF 25
           AL  LEDLRIGDL+ EDSSL+FL +              SG++P++L +F+ LK LDLSF
Sbjct: 486 ALNNLEDLRIGDLNGEDSSLEFLKDQRNLSVLILRNCLISGEIPERLGTFTKLKQLDLSF 545

Query: 24  NKLSGQVP 1
           NKL+GQ+P
Sbjct: 546 NKLTGQIP 553



 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 46/182 (25%), Positives = 79/182 (43%)
 Frame = -1

Query: 546 YLSLGINNLTGPVPPELGDLNRLVSLSISSNSFHGNLPTELGKLTSLEQLYIDSSGLSGP 367
           +L +   ++ G +P EL  L +L+ L++  N  +G++P E+G+L++++ L +  + L+G 
Sbjct: 324 HLKIYALDIVGEIPSELFVLQKLMDLNLGQNVLNGSIPPEIGQLSNMQYLSLGINNLTGQ 383

Query: 366 IPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGTNLEGPIPLSFIALTKLE 187
           +P E                        LGNLT L +L     N  GP+P     LT L+
Sbjct: 384 VPPE------------------------LGNLTKLLSLSFSSNNFFGPLPTELGNLTSLQ 419

Query: 186 DLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPKQLNSFSNLKILDLSFNKLSGQ 7
            L I       S    +                +G+LP+   + + LK+L L    L G 
Sbjct: 420 QLYIDSSGVSGSIPQEVKQLKSLQILWASDNRFTGKLPEFFGALTALKVLRLQGTLLEGP 479

Query: 6   VP 1
           +P
Sbjct: 480 IP 481


>emb|CAD41800.2| OSJNBa0008M17.16 [Oryza sativa Japonica Group]
          Length = 1042

 Score =  188 bits (477), Expect = 6e-46
 Identities = 94/189 (49%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
 Frame = -1

Query: 564 QLSKMQYLSLGINNLTGPVPPELGDLNRLVSLSISSNSFHGNLPTELGKLTSLEQLYIDS 385
           +L+ ++Y+++GIN L+GP+P ELG+L  LVSL++ SN+F+G+LP ELGKLT L+QLYIDS
Sbjct: 147 ELTALKYITVGINALSGPIPKELGNLTNLVSLALGSNNFNGSLPDELGKLTKLQQLYIDS 206

Query: 384 SGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGTNLEGPIPLSFI 205
           +  SGP+P  LS L  L T+WA DN F G++P++LG+LTNL  LRL+G + +GPIP S  
Sbjct: 207 NDFSGPLPTTLSQLTNLSTLWALDNNFTGQIPDYLGSLTNLTQLRLQGNSFQGPIPRSLY 266

Query: 204 ALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPK-QLNSFSNLKILDLS 28
            L KL  LRIGD+    SSL F+G+ T            S  L     + F +L +LDLS
Sbjct: 267 NLVKLRSLRIGDIVNGSSSLAFIGSMTSLGDLVLRNSRISDSLASVDFSKFGSLNLLDLS 326

Query: 27  FNKLSGQVP 1
           FN ++GQ+P
Sbjct: 327 FNNITGQIP 335



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 50/139 (35%), Positives = 66/139 (47%)
 Frame = -1

Query: 417 LTSLEQLYIDSSGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGT 238
           L  + +L I++  + GPIP+EL NL  L  +    N F G LP F+G LT LK + +   
Sbjct: 100 LCHITRLKINTLDVVGPIPEELRNLTHLIKLDFRKNYFTGPLPAFIGELTALKYITVGIN 159

Query: 237 NLEGPIPLSFIALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPKQLNS 58
            L GPIP     LT L  L +G  +   S  D LG  T            SG LP  L+ 
Sbjct: 160 ALSGPIPKELGNLTNLVSLALGSNNFNGSLPDELGKLTKLQQLYIDSNDFSGPLPTTLSQ 219

Query: 57  FSNLKILDLSFNKLSGQVP 1
            +NL  L    N  +GQ+P
Sbjct: 220 LTNLSTLWALDNNFTGQIP 238


>ref|XP_003581672.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Brachypodium distachyon]
          Length = 1045

 Score =  187 bits (476), Expect = 8e-46
 Identities = 96/189 (50%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
 Frame = -1

Query: 564 QLSKMQYLSLGINNLTGPVPPELGDLNRLVSLSISSNSFHGNLPTELGKLTSLEQLYIDS 385
           +L+ ++Y+++G N L+GPVP ELG+L  LVSL++ SN+F+G+LP ELGKLT L+QLYIDS
Sbjct: 155 ELTALKYITVGTNALSGPVPKELGNLTDLVSLALGSNNFNGSLPDELGKLTKLKQLYIDS 214

Query: 384 SGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLEGTNLEGPIPLSFI 205
           +  SGP+P  LS L  L T+WASDN F G++P++LG+LTN+  LRL+G + EGPIP S  
Sbjct: 215 NDFSGPLPATLSQLTNLSTLWASDNNFTGQIPDYLGSLTNMTQLRLQGNSFEGPIPKSLS 274

Query: 204 ALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLP-KQLNSFSNLKILDLS 28
            L KL  LRIGD+    SSL F+GN               G L     + F NL +LDLS
Sbjct: 275 NLIKLTSLRIGDIVNGSSSLAFVGNMPSLGDLVLRNSKIFGTLSLVDFSKFVNLTLLDLS 334

Query: 27  FNKLSGQVP 1
           FN ++GQ+P
Sbjct: 335 FNNITGQMP 343



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 51/141 (36%), Positives = 67/141 (47%)
 Frame = -1

Query: 423 GKLTSLEQLYIDSSGLSGPIPQELSNLKLLHTIWASDNLFNGKLPEFLGNLTNLKTLRLE 244
           G L  + +L I+S   +GPIP+EL NL  L  +    N   G LP F+G LT LK + + 
Sbjct: 106 GTLCHVTRLKINSLDAAGPIPEELRNLTHLIKLDFRKNSLTGPLPAFIGELTALKYITVG 165

Query: 243 GTNLEGPIPLSFIALTKLEDLRIGDLSKEDSSLDFLGNFTXXXXXXXXXXXXSGQLPKQL 64
              L GP+P     LT L  L +G  +   S  D LG  T            SG LP  L
Sbjct: 166 TNALSGPVPKELGNLTDLVSLALGSNNFNGSLPDELGKLTKLKQLYIDSNDFSGPLPATL 225

Query: 63  NSFSNLKILDLSFNKLSGQVP 1
           +  +NL  L  S N  +GQ+P
Sbjct: 226 SQLTNLSTLWASDNNFTGQIP 246


Top