BLASTX nr result

ID: Bupleurum21_contig00024441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024441
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253...    74   2e-11
ref|XP_002325657.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
gb|AFK35843.1| unknown [Medicago truncatula]                           69   5e-10
ref|XP_003522007.1| PREDICTED: uncharacterized protein LOC100789...    69   5e-10
ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253378 [Vitis vinifera]
          Length = 208

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 51/126 (40%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
 Frame = +1

Query: 94  EIKQDDKLFYT--------KNPS----YTGVSVAVPFIWESKPGTPNHKLFPADQHKNGD 237
           +IK+DDK F           NPS    Y GV+ AVPF WES+PGTP +    +       
Sbjct: 14  QIKEDDKFFSRLLSKESSMANPSSRVYYGGVTGAVPFTWESQPGTPKYTFSESSL----- 68

Query: 238 LHPTLTPPPPCYFQTPAAVANSSKKHSKFNLFASLFPRMLHLNKGTRRNQITMSPYTTLL 417
             P LTPPP  Y  +     N  KKHS+ NL  S+FPRM H N   ++  +  SP    L
Sbjct: 69  --PPLTPPPSYYSNSMDKKPN--KKHSRSNLLHSIFPRMNHNNNNPKKPNVLSSP---SL 121

Query: 418 SSSIPS 435
           SSS  S
Sbjct: 122 SSSCSS 127


>ref|XP_002325657.1| predicted protein [Populus trichocarpa] gi|222862532|gb|EEF00039.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 13/124 (10%)
 Frame = +1

Query: 94  EIKQDDKLFYTKNPS-------------YTGVSVAVPFIWESKPGTPNHKLFPADQHKNG 234
           ++KQDDK  +++ P+             + G SVAVPF WES+PGTP  K       +  
Sbjct: 14  KLKQDDKKVFSRRPARDVSLSNLSTEDYHVGASVAVPFTWESQPGTPKIKF------REN 67

Query: 235 DLHPTLTPPPPCYFQTPAAVANSSKKHSKFNLFASLFPRMLHLNKGTRRNQITMSPYTTL 414
            L P LTPPP   +  P      +KK SK+NL  S+FP+     + TR+  + +SP ++ 
Sbjct: 68  PL-PPLTPPPSYSYNNP---KRPTKKLSKYNLLDSIFPK-----RSTRKANLPVSPASSS 118

Query: 415 LSSS 426
            SSS
Sbjct: 119 SSSS 122


>gb|AFK35843.1| unknown [Medicago truncatula]
          Length = 190

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
 Frame = +1

Query: 79  ENPLYEIKQDDKLFYTK--------NPSYTGVSVAVPFIWESKPGTPNHKLFPADQHKNG 234
           E  + +IKQDDK F           +PS+  VS+AVPF+WES+PGTP H         + 
Sbjct: 7   EKSVLQIKQDDKFFSRLLSKENSNIHPSFR-VSLAVPFVWESQPGTPKHTF-------SN 58

Query: 235 DLHPTLTPPPPCYFQTPAAVANSSKKHSKFN-LFASLFPRMLHLNKGTRRNQITMSPYTT 411
           D  P LTPPP   F    A     KKHSK +  F +LF ++       + NQ + S  ++
Sbjct: 59  DTIPPLTPPPSYQFNN--ANKKIEKKHSKSSKYFLALFQKL----NFRKNNQSSSSSSSS 112

Query: 412 LLSSSIPS 435
            LSSS PS
Sbjct: 113 SLSSSYPS 120


>ref|XP_003522007.1| PREDICTED: uncharacterized protein LOC100789329 [Glycine max]
          Length = 178

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
 Frame = +1

Query: 79  ENPLYEIKQDDKLFYT--------KNPSYTGVSVAVPFIWESKPGTPNHKLFPADQHKNG 234
           +  +  IKQDDK F           NPS+  +++AVPF+WES+PGTP H+        + 
Sbjct: 10  QKSVLSIKQDDKFFCRLLSKESSMSNPSFR-IALAVPFVWESEPGTPKHRF-------SE 61

Query: 235 DLHPTLTPPPPCYFQTPAAVANSSKKH-SKFNLFASLFPRMLHLNKGTRRNQITMSPYTT 411
           D  P LTPPP  +F T  +     KKH SK +L  ++ P+ L+L K    +  +  P + 
Sbjct: 62  DTLPPLTPPPSYHFSTINSYKKKEKKHSSKSSLLLTMLPK-LNLIKKMILSSSSSYPSSW 120

Query: 412 LLSSSIPSKDV 444
             SSS  SK V
Sbjct: 121 PSSSSSSSKVV 131


>ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|222868288|gb|EEF05419.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 52/141 (36%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
 Frame = +1

Query: 76  HENPLYEIKQDDKLFYT--------KNPS----YTGVSVAVPFIWESKPGTPNHKLFPAD 219
           H     E+KQDDK F           NPS    Y GVSVAVPF+WES+PGTP +      
Sbjct: 11  HPQKALEMKQDDKFFSRLMSKENSMANPSFRVYYGGVSVAVPFVWESQPGTPKYTFCEKT 70

Query: 220 QHKNGDLHPTLTPPPPCYFQTPAAVANSSKK----HSKFNLFASLFPR--MLHLNKGTRR 381
                   P LTPPP  Y        NS+KK    HS+ NL   LFPR  +   N  +  
Sbjct: 71  L-------PPLTPPPSYY-------TNSNKKPTKNHSRSNLLRFLFPRNNLRKTNVSSSA 116

Query: 382 NQITMSPYTTLLSSSIPSKDV 444
             ++ SP +   SS   S ++
Sbjct: 117 TNLSTSPSSASWSSLTSSSNL 137


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