BLASTX nr result

ID: Bupleurum21_contig00024440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024440
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273746.1| PREDICTED: uncharacterized protein LOC100259...   174   9e-42
ref|XP_002312016.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_003536352.1| PREDICTED: uncharacterized protein LOC100305...   163   2e-38
ref|XP_002881626.1| hypothetical protein ARALYDRAFT_482919 [Arab...   162   3e-38
ref|XP_004158592.1| PREDICTED: uncharacterized protein LOC101230...   162   3e-38

>ref|XP_002273746.1| PREDICTED: uncharacterized protein LOC100259928 [Vitis vinifera]
           gi|296086014|emb|CBI31455.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score =  174 bits (440), Expect = 9e-42
 Identities = 92/165 (55%), Positives = 121/165 (73%), Gaps = 13/165 (7%)
 Frame = +3

Query: 57  SGIC---QMAKLSQSTLSQIVIREARILDSWEVAKAHCSTYFSKYSFPIDLVLKVDCLLA 227
           SGIC   Q+A+L  + L +IV+REAR+ D WEVA+ HCS++F +YSFP+D VL++D LLA
Sbjct: 42  SGICRASQVAELFPTVLPEIVVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRIDRLLA 101

Query: 228 IVWGFYVVPNGSRRTYIVAVND----------SQDIKSHGSDWKFGLNKGYVVGTLTLDN 377
           +  GF + PNG RRT +VAV            S+D K  G D KF  NKGYV G LT+D 
Sbjct: 102 MFAGFSL-PNGCRRTCLVAVIGGSADDTFFLGSEDFKIGGFDGKFSFNKGYVAGILTVDT 160

Query: 378 VADYLPREGPLLQRRTGVAYLSDLLVREEYRRKGIAQKLIVEAEA 512
           VAD+LPR+GPL QRR+G+AY+S++ VRE +RRKGIA++LIV+AEA
Sbjct: 161 VADFLPRKGPLRQRRSGIAYISNVAVRETFRRKGIAKRLIVKAEA 205


>ref|XP_002312016.1| predicted protein [Populus trichocarpa] gi|222851836|gb|EEE89383.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  168 bits (425), Expect = 5e-40
 Identities = 88/165 (53%), Positives = 119/165 (72%), Gaps = 13/165 (7%)
 Frame = +3

Query: 57  SGIC---QMAKLSQSTLSQIVIREARILDSWEVAKAHCSTYFSKYSFPIDLVLKVDCLLA 227
           SG+C   Q+A+   +   +IV+REAR+ D WEVA+ HCS++F +YSFP+D VL+VD L A
Sbjct: 58  SGLCRASQVAEFYPTVSPEIVVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRVDRLAA 117

Query: 228 IVWGFYVVPNGSRRTYIVAVNDS----------QDIKSHGSDWKFGLNKGYVVGTLTLDN 377
           ++ GF + PNG RRT +VAV  S          ++ K  G D KF LN+GYV G LT+D 
Sbjct: 118 MLSGFSI-PNGCRRTCLVAVVGSSVDQTFYIGIENFKIGGFDGKFSLNRGYVTGILTVDT 176

Query: 378 VADYLPREGPLLQRRTGVAYLSDLLVREEYRRKGIAQKLIVEAEA 512
           VAD+LPR+GPL QRRTG+AY+S++ VRE +RRKGIA++LI +AEA
Sbjct: 177 VADFLPRKGPLRQRRTGIAYISNVAVRERFRRKGIAKRLIAKAEA 221


>ref|XP_003536352.1| PREDICTED: uncharacterized protein LOC100305894 [Glycine max]
          Length = 278

 Score =  163 bits (412), Expect = 2e-38
 Identities = 84/165 (50%), Positives = 117/165 (70%), Gaps = 13/165 (7%)
 Frame = +3

Query: 57  SGIC---QMAKLSQSTLSQIVIREARILDSWEVAKAHCSTYFSKYSFPIDLVLKVDCLLA 227
           SG+C   Q+  L  +   +I++REAR+ D WEVA+ HCS++F +YSFP+D VL++D L+A
Sbjct: 49  SGLCRASQVVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVA 108

Query: 228 IVWGFYVVPNGSRRTYIVAVND----------SQDIKSHGSDWKFGLNKGYVVGTLTLDN 377
           ++ GF  +PNG +R  +VAV            S+D K  G D K  LNKGYV G LT+D 
Sbjct: 109 MMAGF-TLPNGCKRICLVAVTGNSFGETVLFGSEDFKVGGFDGKISLNKGYVAGILTVDT 167

Query: 378 VADYLPREGPLLQRRTGVAYLSDLLVREEYRRKGIAQKLIVEAEA 512
           VAD+LPR+GPL QRRTGVAY+S++ VRE++RRKGIA+ L+ +AE+
Sbjct: 168 VADFLPRKGPLRQRRTGVAYISNVAVREKFRRKGIAKHLVAKAES 212


>ref|XP_002881626.1| hypothetical protein ARALYDRAFT_482919 [Arabidopsis lyrata subsp.
           lyrata] gi|297327465|gb|EFH57885.1| hypothetical protein
           ARALYDRAFT_482919 [Arabidopsis lyrata subsp. lyrata]
          Length = 285

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/165 (53%), Positives = 115/165 (69%), Gaps = 13/165 (7%)
 Frame = +3

Query: 57  SGIC---QMAKLSQSTLSQIVIREARILDSWEVAKAHCSTYFSKYSFPIDLVLKVDCLLA 227
           SG C   Q+  L  +   +IV+REAR+ D WEVA+ HCS++F  YSFP+D+VL+VD L+A
Sbjct: 55  SGACNASQIVDLFPAVSPEIVVREARLEDCWEVAETHCSSFFPGYSFPLDVVLRVDRLMA 114

Query: 228 IVWGFYVVPNGSRRTYIVAVNDS----------QDIKSHGSDWKFGLNKGYVVGTLTLDN 377
           +V GF + P G +RT +VAV  S          +D K    D K  LNKGYV G LT+D 
Sbjct: 115 MVMGFSIPP-GCQRTCLVAVIGSSVDETICFGSEDFKIGAFDAKISLNKGYVAGILTVDT 173

Query: 378 VADYLPREGPLLQRRTGVAYLSDLLVREEYRRKGIAQKLIVEAEA 512
           VADYLPR+GPL QRRTG+AY+S++ VRE +RRKGIA++LI +AEA
Sbjct: 174 VADYLPRKGPLRQRRTGIAYISNVAVRENFRRKGIAKRLIWKAEA 218


>ref|XP_004158592.1| PREDICTED: uncharacterized protein LOC101230411 [Cucumis sativus]
          Length = 291

 Score =  162 bits (409), Expect = 3e-38
 Identities = 87/158 (55%), Positives = 113/158 (71%), Gaps = 10/158 (6%)
 Frame = +3

Query: 69  QMAKLSQSTLSQIVIREARILDSWEVAKAHCSTYFSKYSFPIDLVLKVDCLLAIVWGFYV 248
           Q+  L  +   +I +REARI D WEVA+ HCS++F +YSFP+D VL+VD L+A++ G  V
Sbjct: 70  QVFDLFPTLTPEITVREARIEDCWEVAETHCSSFFPEYSFPLDFVLRVDRLVAMLSGLSV 129

Query: 249 VPNGSRRTYIVAV-----NDS-----QDIKSHGSDWKFGLNKGYVVGTLTLDNVADYLPR 398
            PNG RR  +VAV     NDS      D K  G D K  LNKGYV G LT+D VAD+LPR
Sbjct: 130 -PNGCRRICLVAVIGGSENDSFLIGPDDFKIGGFDGKVSLNKGYVAGILTVDTVADFLPR 188

Query: 399 EGPLLQRRTGVAYLSDLLVREEYRRKGIAQKLIVEAEA 512
           +GP+ QRRTG+AY+S++ VRE +RRKGIA+KLI++AEA
Sbjct: 189 KGPMRQRRTGIAYISNVAVRERFRRKGIAKKLILKAEA 226


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