BLASTX nr result

ID: Bupleurum21_contig00024413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024413
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35665.3| unnamed protein product [Vitis vinifera]              249   3e-64
ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|2...   239   5e-61
ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2...   228   7e-58
ref|NP_849717.1| uncharacterized protein [Arabidopsis thaliana] ...   226   3e-57
ref|NP_001077615.1| uncharacterized protein [Arabidopsis thalian...   226   3e-57

>emb|CBI35665.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  249 bits (637), Expect = 3e-64
 Identities = 120/165 (72%), Positives = 141/165 (85%), Gaps = 5/165 (3%)
 Frame = +1

Query: 31  SSGYGKPPWVFIGSALYQLNLVKAETARAFIPKEFRLVEAFGYTLGGFFLANYSDSPAGK 210
           SSGYGKPPW+F G ALYQL+LVKAETARAFIPKEFRLVEAFGYTLGGFFLA+Y DSPAG 
Sbjct: 28  SSGYGKPPWIFKGRALYQLHLVKAETARAFIPKEFRLVEAFGYTLGGFFLASYEDSPAGV 87

Query: 211 FDELVVIGGIVWNPPTSCAWAARVLVSSKEACIHGRKDIGLPSQVAKFSKQISAFPK-PK 387
           FDELVVI GIVWNPPTSCAWAARVLV+S EAC+HGRK +GLPSQVA+FSK+I+A P+  +
Sbjct: 88  FDELVVIAGIVWNPPTSCAWAARVLVNSDEACVHGRKAVGLPSQVARFSKRITAIPRQQR 147

Query: 388 SRFNSFFSMLGVGGSTN----CMDIQITETKDTAAADFCSINLST 510
           S+ N F +M+G+G + N    CMD+Q+TE +   AAD CS+NL+T
Sbjct: 148 SKTNGFLNMIGIGNTFNSPKDCMDVQVTEIEGHTAADACSVNLNT 192


>ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|222841187|gb|EEE78734.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  239 bits (609), Expect = 5e-61
 Identities = 122/186 (65%), Positives = 145/186 (77%), Gaps = 11/186 (5%)
 Frame = +1

Query: 4   MKAKETNSISSGYGKPPWVFIG-----SALYQLNLVKAETARAFIPKEFRLVEAFGYTLG 168
           M+  ET   SSGYGKPPW+F G     +ALYQL+LVK+ETARAFIPKEFRLVEAFGYTLG
Sbjct: 1   MEVAETKC-SSGYGKPPWIFKGRHVSSNALYQLHLVKSETARAFIPKEFRLVEAFGYTLG 59

Query: 169 GFFLANYSDSPAGKFDELVVIGGIVWNPPTSCAWAARVLVSSKEACIHGRKDIGLPSQVA 348
           GFFLA+Y DSPAG FDELVVI G VWNPPTSCAWAARVLV+S +AC HGRK++GLPSQVA
Sbjct: 60  GFFLASYEDSPAGVFDELVVIAGTVWNPPTSCAWAARVLVNSGDACDHGRKEVGLPSQVA 119

Query: 349 KFSKQISAFPKP-KSRFNSFFSMLGVG----GSTNCMDIQITETKDTAAADFCSINL-ST 510
           KFSK+I+A P+  KS+F  F   +G+G     + +CMD+ +TET D +  D C+INL + 
Sbjct: 120 KFSKKITAIPRQRKSKFTGFLDKIGLGTASSSTKSCMDVLVTETNDRSTTDICNINLTAV 179

Query: 511 GSKFQK 528
           G KF K
Sbjct: 180 GMKFDK 185


>ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  228 bits (582), Expect = 7e-58
 Identities = 122/191 (63%), Positives = 144/191 (75%), Gaps = 16/191 (8%)
 Frame = +1

Query: 4   MKAKETNSISSGYGKPPWVFIG-----SALYQLNLVKAETARAFIPKEFRLVEAFGYTLG 168
           M A +T   S GYGKPPW+F G      ALYQL+LVK++ ARA IPKEFRLVEAFGYTLG
Sbjct: 1   MAAAQTKC-SLGYGKPPWIFKGRQGYYKALYQLHLVKSKIARASIPKEFRLVEAFGYTLG 59

Query: 169 GFFLANYSDSPAGKFDELVVIGGIVWNPPTSCAWAARVLVSSKEACIHGRKDIGLPSQVA 348
           GFFLA+Y DSPAG FDELVVI GIVWNPPTSCAWAARVLV+S +AC HGRKD+GLPSQVA
Sbjct: 60  GFFLASYEDSPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSGDACDHGRKDVGLPSQVA 119

Query: 349 KFSK---QISAFP-KPKSRFNSFFSMLGVG----GSTNCMDIQITETKDTAAADFCSINL 504
           KFSK   +I+A P + KS+FN F  M+G+G     + +CMD+ +TET   +A D C+I L
Sbjct: 120 KFSKVIFKITAIPRRRKSKFNGFLDMIGLGTASSSTKDCMDVLVTETNGPSATDICNIKL 179

Query: 505 ST---GSKFQK 528
           +T   G KF K
Sbjct: 180 TTSVPGVKFDK 190


>ref|NP_849717.1| uncharacterized protein [Arabidopsis thaliana]
           gi|42562369|ref|NP_174131.3| uncharacterized protein
           [Arabidopsis thaliana] gi|145362298|ref|NP_973925.2|
           uncharacterized protein [Arabidopsis thaliana]
           gi|26452923|dbj|BAC43539.1| unknown protein [Arabidopsis
           thaliana] gi|28973285|gb|AAO63967.1| unknown protein
           [Arabidopsis thaliana] gi|222424621|dbj|BAH20265.1|
           AT1G28100 [Arabidopsis thaliana]
           gi|332192792|gb|AEE30913.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332192793|gb|AEE30914.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332192794|gb|AEE30915.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 282

 Score =  226 bits (577), Expect = 3e-57
 Identities = 111/168 (66%), Positives = 131/168 (77%), Gaps = 5/168 (2%)
 Frame = +1

Query: 16  ETNSISSGYGKPPWVFIGSALYQLNLVKAETARAFIPKEFRLVEAFGYTLGGFFLANYSD 195
           E   +SSGY KPPW+F GSALYQ++LVKA TARAFIPKEFRLVEAFGYTLGGFFLA+Y D
Sbjct: 4   EEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLASYDD 63

Query: 196 SPAGKFDELVVIGGIVWNPPTSCAWAARVLVSSKEACIHGRKDIGLPSQVAKFSKQISAF 375
           SPAG FDELVVI GIVWNPPTSCAWAARVLV+S EAC HGRK++GLPSQVA+FSK I+A 
Sbjct: 64  SPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNITAV 123

Query: 376 PKPK-SRFNSFFSMLGVGGS----TNCMDIQITETKDTAAADFCSINL 504
           PK K  R   F    G+G +     N M+++++E    A+ D C+I +
Sbjct: 124 PKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQI 171


>ref|NP_001077615.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332192796|gb|AEE30917.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 212

 Score =  226 bits (577), Expect = 3e-57
 Identities = 111/168 (66%), Positives = 131/168 (77%), Gaps = 5/168 (2%)
 Frame = +1

Query: 16  ETNSISSGYGKPPWVFIGSALYQLNLVKAETARAFIPKEFRLVEAFGYTLGGFFLANYSD 195
           E   +SSGY KPPW+F GSALYQ++LVKA TARAFIPKEFRLVEAFGYTLGGFFLA+Y D
Sbjct: 4   EEKRVSSGYAKPPWIFKGSALYQIHLVKAATARAFIPKEFRLVEAFGYTLGGFFLASYDD 63

Query: 196 SPAGKFDELVVIGGIVWNPPTSCAWAARVLVSSKEACIHGRKDIGLPSQVAKFSKQISAF 375
           SPAG FDELVVI GIVWNPPTSCAWAARVLV+S EAC HGRK++GLPSQVA+FSK I+A 
Sbjct: 64  SPAGVFDELVVIAGIVWNPPTSCAWAARVLVNSDEACHHGRKEVGLPSQVARFSKNITAV 123

Query: 376 PKPK-SRFNSFFSMLGVGGS----TNCMDIQITETKDTAAADFCSINL 504
           PK K  R   F    G+G +     N M+++++E    A+ D C+I +
Sbjct: 124 PKQKRDRAFGFLDTFGLGTTLSHPENLMEVKVSEVDSAASTDICNIQI 171


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