BLASTX nr result

ID: Bupleurum21_contig00024408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024408
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527980.1| transcription factor, putative [Ricinus comm...   120   1e-25
ref|XP_002280812.1| PREDICTED: NAC domain-containing protein 100...   116   2e-24
ref|XP_002330817.1| NAC domain protein, IPR003441 [Populus trich...   108   3e-22
gb|AFN55276.1| NAC domain-containing protein [Tamarix hispida]        107   8e-22
ref|XP_003527816.1| PREDICTED: NAC domain-containing protein 100...   107   1e-21

>ref|XP_002527980.1| transcription factor, putative [Ricinus communis]
           gi|223532606|gb|EEF34392.1| transcription factor,
           putative [Ricinus communis]
          Length = 379

 Score =  120 bits (301), Expect = 1e-25
 Identities = 66/118 (55%), Positives = 83/118 (70%)
 Frame = +3

Query: 3   RGEKTNWVMHEYRLHSKSSYRTTKQDEWVVCRVFQKNAGAKKFPTSSNQSRPMNPYNPDT 182
           RGEKTNWVMHEYR+HSKS++RT+K DEWVVCRVFQK+AGAKK+P   NQSR +NPY+ D 
Sbjct: 176 RGEKTNWVMHEYRIHSKSAFRTSK-DEWVVCRVFQKSAGAKKYP--PNQSRAVNPYSLDM 232

Query: 183 MSANNTTIHPSQMLLHSSDQNIAFQHQFPIGMSRINNYLSNAELAELSRVYRSSNHST 356
                 +  P+QM+        A  +QFP+G     NY+S AELAEL+R +R+   ST
Sbjct: 233 ----GPSSIPAQMM------QAAENYQFPVG----RNYMSQAELAELTRAFRAGGSST 276


>ref|XP_002280812.1| PREDICTED: NAC domain-containing protein 100 [Vitis vinifera]
           gi|296081784|emb|CBI20789.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/115 (57%), Positives = 79/115 (68%)
 Frame = +3

Query: 3   RGEKTNWVMHEYRLHSKSSYRTTKQDEWVVCRVFQKNAGAKKFPTSSNQSRPMNPYNPDT 182
           RGEKTNWVMHEYR+HSKS++RT+K DEWVVCRVFQK+A  KK+P  SNQSR MNPY+ D 
Sbjct: 124 RGEKTNWVMHEYRIHSKSAFRTSK-DEWVVCRVFQKSAAGKKYP--SNQSRGMNPYSLDI 180

Query: 183 MSANNTTIHPSQMLLHSSDQNIAFQHQFPIGMSRINNYLSNAELAELSRVYRSSN 347
                 ++ P  ML   S        QFP+G     NY+SNAELAEL+RV R  +
Sbjct: 181 ----GPSVMPPPMLQADSS-------QFPMG----RNYVSNAELAELTRVLRGGS 220


>ref|XP_002330817.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222872619|gb|EEF09750.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 316

 Score =  108 bits (271), Expect = 3e-22
 Identities = 64/114 (56%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   RGEKTNWVMHEYRLHSKSSYRTTKQDEWVVCRVFQKNAGAKKFPTSSNQSRPMNPYNPDT 182
           RGEKTNWVMHEYR HSK+++R +K DEWVVCRVFQK+AG KK+P  SNQSR  NPYN + 
Sbjct: 124 RGEKTNWVMHEYRFHSKAAFRASK-DEWVVCRVFQKSAGVKKYP--SNQSRAANPYNLEI 180

Query: 183 MSANNTTIHPSQMLLHSSDQNIAFQHQFPIGMSRINNYLSNAEL-AELSRVYRS 341
                 ++ PSQM+        A   Q PIG    N  +SNAEL AEL+RV+R+
Sbjct: 181 ----GPSVIPSQMM------QAAENFQLPIGR---NYMMSNAELQAELTRVFRA 221


>gb|AFN55276.1| NAC domain-containing protein [Tamarix hispida]
          Length = 342

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/119 (53%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   RGEKTNWVMHEYRLHSKSSYRTTKQDEWVVCRVFQKNAGAKKFPTSSNQSRPMNPYNPDT 182
           RGEK+NWVMHEYR+HSKS+YR  K DEWVVCRVFQK+AGAKK+PTS  QSR +N      
Sbjct: 135 RGEKSNWVMHEYRVHSKSAYRAAK-DEWVVCRVFQKSAGAKKYPTS--QSRAINGAINLD 191

Query: 183 MSANNTTIHPSQMLLHSSDQNIAFQHQFPIGMSRINNYLSNAELAELSR-VYRSSNHST 356
           M+  N    P   L  S   N               NY+SN ELAELSR VYR+S H +
Sbjct: 192 MAGPNLLPQPMMQLDPSQYPNFG-----------ARNYMSNVELAELSRAVYRTSTHGS 239


>ref|XP_003527816.1| PREDICTED: NAC domain-containing protein 100-like [Glycine max]
          Length = 338

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/118 (47%), Positives = 75/118 (63%)
 Frame = +3

Query: 3   RGEKTNWVMHEYRLHSKSSYRTTKQDEWVVCRVFQKNAGAKKFPTSSNQSRPMNPYNPDT 182
           RGEK+NWVMHEYR+HSKSSYRT +QDEWVVCRVF+K+  AKK+P SSN +R +NPY   +
Sbjct: 125 RGEKSNWVMHEYRIHSKSSYRTNRQDEWVVCRVFKKSGNAKKYP-SSNHARAVNPY---S 180

Query: 183 MSANNTTIHPSQMLLHSSDQNIAFQHQFPIGMSRINNYLSNAELAELSRVYRSSNHST 356
           +      + P  M L     +  +            NY+++AELAEL+RV R    ++
Sbjct: 181 LEIEPNILPPLMMQLGDPGAHFLYG----------RNYMNSAELAELARVLRGGGSTS 228


Top