BLASTX nr result

ID: Bupleurum21_contig00024397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024397
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283936.2| PREDICTED: uncharacterized protein LOC100268...    64   1e-08
emb|CBI28020.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|NP_197468.2| Exostosin family protein [Arabidopsis thaliana]...    56   3e-06

>ref|XP_002283936.2| PREDICTED: uncharacterized protein LOC100268163 [Vitis vinifera]
          Length = 738

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
 Frame = -3

Query: 425 PVTSILDNGVEDIDTSLVSDTVVARESALPTHLVQSRQGNSLLNITIPSNLMKRVSVFXX 246
           P   I  + +   D SL   T  +  +   +HL+ S   +SL N T    +    +    
Sbjct: 220 PNEGISTDNIVKADASLTPSTPGSLGTTFKSHLLASPGVDSLFNTTYIEKMASNGNASNH 279

Query: 245 XXXXXTLFEGQLEE--FPNDGDLILLPSN--KMGNVSANTSYPVKKKMKCLTPPTSITSI 78
                    G+ E+     D +L++L S+   + N SA TS P +KKM+   PP S+TSI
Sbjct: 280 LTATDISSVGKPEKEILSKDENLLVLQSDLADLNNNSAMTSNPGRKKMQSEMPPKSVTSI 339

Query: 77  YQMNRLLLKHRRSSRAM 27
           Y MNR L++HR SSRAM
Sbjct: 340 YDMNRRLVRHRASSRAM 356


>emb|CBI28020.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
 Frame = -3

Query: 218 GQLEE--FPNDGDLILLPSN--KMGNVSANTSYPVKKKMKCLTPPTSITSIYQMNRLLLK 51
           G LE+     D +L++L S+   + N SA TS P +KKM+   PP S+TSIY MNR L++
Sbjct: 274 GSLEKEILSKDENLLVLQSDLADLNNNSAMTSNPGRKKMQSEMPPKSVTSIYDMNRRLVR 333

Query: 50  HRRSSRAM 27
           HR SSRAM
Sbjct: 334 HRASSRAM 341


>ref|NP_197468.2| Exostosin family protein [Arabidopsis thaliana]
           gi|332005353|gb|AED92736.1| Exostosin family protein
           [Arabidopsis thaliana]
          Length = 610

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/120 (33%), Positives = 59/120 (49%)
 Frame = -3

Query: 386 DTSLVSDTVVARESALPTHLVQSRQGNSLLNITIPSNLMKRVSVFXXXXXXXTLFEGQLE 207
           D    S+T V ++ ++ T    S  G  + N+T+ S    + S+         L  G   
Sbjct: 131 DNLFPSETTVMQKESVST----SNNGYQVQNVTVQSQKNVKSSI---------LSGGSSI 177

Query: 206 EFPNDGDLILLPSNKMGNVSANTSYPVKKKMKCLTPPTSITSIYQMNRLLLKHRRSSRAM 27
             P  G+  LL S K+           KKKM+C  PP S+T+I +MNR+L +HRR+SRAM
Sbjct: 178 ASPASGNSSLLVSKKVSK---------KKKMRCDLPPKSVTTIDEMNRILARHRRTSRAM 228


Top