BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024391
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   144   1e-32
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...   142   3e-32
ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31

>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  144 bits (362), Expect = 1e-32
 Identities = 62/92 (67%), Positives = 77/92 (83%)
 Frame = -3

Query: 277 RGGWRDIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEA 98
           +GGWRD++VESALVD+Y+KCGCI++A  IF +M VRN +TWNS+I G AQNGRG E L  
Sbjct: 389 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 448

Query: 97  LNEMIKEGTVPDYITFVGVLFACSHAGLVDEG 2
            N+M+KEG  PDYI+F+G+LFACSH GLVDEG
Sbjct: 449 FNQMVKEGIKPDYISFIGILFACSHRGLVDEG 480



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 262 DIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEALNEMI 83
           ++VVES+LVD+Y KCG +  + RIF  M ++N+V+W++L+ G  QNG     ++   +M 
Sbjct: 297 NVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME 356

Query: 82  KEGTVPDYITFVGVLFACSHAGLVDEG 2
           K     D   F  +L  C+    V +G
Sbjct: 357 K----VDLYCFGTILRTCAGLAAVRQG 379


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  144 bits (362), Expect = 1e-32
 Identities = 62/92 (67%), Positives = 77/92 (83%)
 Frame = -3

Query: 277 RGGWRDIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEA 98
           +GGWRD++VESALVD+Y+KCGCI++A  IF +M VRN +TWNS+I G AQNGRG E L  
Sbjct: 448 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 507

Query: 97  LNEMIKEGTVPDYITFVGVLFACSHAGLVDEG 2
            N+M+KEG  PDYI+F+G+LFACSH GLVDEG
Sbjct: 508 FNQMVKEGIKPDYISFIGILFACSHRGLVDEG 539



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 262 DIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEALNEMI 83
           ++VVES+LVD+Y KCG +  + RIF  M ++N+V+W++L+ G  QNG     ++   +M 
Sbjct: 356 NVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME 415

Query: 82  KEGTVPDYITFVGVLFACSHAGLVDEG 2
           K     D   F  +L  C+    V +G
Sbjct: 416 K----VDLYCFGTILRTCAGLAAVRQG 438


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/89 (73%), Positives = 75/89 (84%)
 Frame = -3

Query: 268 WRDIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEALNE 89
           WRD+V ESALVD+Y+KCGCIDFAYRIF  M VRN +TWNS+I G AQNGRG E  +  +E
Sbjct: 393 WRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDE 452

Query: 88  MIKEGTVPDYITFVGVLFACSHAGLVDEG 2
           MI+EG  PDYI+FVGVLFACSHAGLVD+G
Sbjct: 453 MIEEGIRPDYISFVGVLFACSHAGLVDQG 481



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 262 DIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEALNEMI 83
           ++ VES+LVD+Y KC  ++ +  +F  M V+N V+W +L+ G  QNG      E++  + 
Sbjct: 298 NVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNG----DFESVIRIF 353

Query: 82  KEGTVPDYITFVGVLFACSHAGLVDEG 2
           +EG   D  +F  VL AC+    V +G
Sbjct: 354 REGKKVDTYSFGTVLRACAGLAAVRQG 380


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  142 bits (358), Expect = 3e-32
 Identities = 61/85 (71%), Positives = 73/85 (85%)
 Frame = -3

Query: 277 RGGWRDIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEA 98
           RGGWRD+++ESALVD+Y+KCGCIDFA+RIF +M VRN +TWNS+ICG AQNG   E L  
Sbjct: 382 RGGWRDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLITWNSMICGFAQNGWAEEALRI 441

Query: 97  LNEMIKEGTVPDYITFVGVLFACSH 23
            +EM+KEGT PDYITF+GVLFACSH
Sbjct: 442 FDEMVKEGTKPDYITFIGVLFACSH 466



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/87 (40%), Positives = 52/87 (59%)
 Frame = -3

Query: 262 DIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEALNEMI 83
           ++VVES+LVD+Y KCG +D + R+F  M V+N+V+W++L+ G  QNG     +    EM 
Sbjct: 289 NVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREM- 347

Query: 82  KEGTVPDYITFVGVLFACSHAGLVDEG 2
             G   D  +F  VL AC+    V +G
Sbjct: 348 --GEADDLYSFGTVLRACAGLAAVRQG 372


>ref|XP_003535018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 611

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/92 (67%), Positives = 75/92 (81%)
 Frame = -3

Query: 277 RGGWRDIVVESALVDVYSKCGCIDFAYRIFKEMVVRNTVTWNSLICGLAQNGRGIETLEA 98
           RGGWRD+VVESALVD+Y+KCG +DFAYR+F  M  RN +TWN++I G AQNGRG E +E 
Sbjct: 386 RGGWRDVVVESALVDLYAKCGSVDFAYRLFSRMEARNLITWNAMIGGFAQNGRGQEGVEL 445

Query: 97  LNEMIKEGTVPDYITFVGVLFACSHAGLVDEG 2
             EM+KEG  PD+I+FV VLFACSH GLVD+G
Sbjct: 446 FEEMVKEGVRPDWISFVNVLFACSHNGLVDQG 477