BLASTX nr result

ID: Bupleurum21_contig00024379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024379
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...   140   1e-31
ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabi...   137   1e-30
gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. glo...   136   2e-30

>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
           gi|223544730|gb|EEF46246.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 494

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/88 (73%), Positives = 74/88 (84%)
 Frame = -3

Query: 265 FEGIRGQGVRVPVRIYGSREIPVTNVTFKGLLVGISYKKKHIFQCSYVQGRVIGRIFPAP 86
           F G+ GQGVRVPVRI+GS EIPV NVTF+ + VG++YKKKHIFQC++VQGRVIG IFPAP
Sbjct: 406 FTGVHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAP 465

Query: 85  CENLDIYDEDGRLVKQSTSDNNVDADYD 2
           CENLD YDE GRLVK+S S N  D DYD
Sbjct: 466 CENLDRYDEQGRLVKRSVSQNLTDIDYD 493


>ref|XP_002324728.1| predicted protein [Populus trichocarpa] gi|222866162|gb|EEF03293.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -3

Query: 265 FEGIRGQGVRVPVRIYGSREIPVTNVTFKGLLVGISYKKKHIFQCSYVQGRVIGRIFPAP 86
           F GI GQGVRVPVRI+GS EIPV NVTF+ + VG++YKKKHIFQC++VQGRVIG IFPAP
Sbjct: 407 FSGIHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGTIFPAP 466

Query: 85  CENLDIYDEDGRLVKQSTSDNNVDADYD 2
           CENLD YDE G+LVK S S N  D DYD
Sbjct: 467 CENLDRYDEQGKLVKLSVSQNITDIDYD 494


>ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|222833326|gb|EEE71803.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/88 (72%), Positives = 74/88 (84%)
 Frame = -3

Query: 265 FEGIRGQGVRVPVRIYGSREIPVTNVTFKGLLVGISYKKKHIFQCSYVQGRVIGRIFPAP 86
           F GI GQGVRVPVRI+GS+EIPV NVTF  + VG++YKKKHIFQC++VQGRVIG +FPAP
Sbjct: 407 FTGIHGQGVRVPVRIHGSQEIPVRNVTFWDMSVGLTYKKKHIFQCAFVQGRVIGTVFPAP 466

Query: 85  CENLDIYDEDGRLVKQSTSDNNVDADYD 2
           CENLD YDE G+LVK+S S N  D DYD
Sbjct: 467 CENLDRYDEQGKLVKRSVSQNLTDIDYD 494


>ref|XP_002877258.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323096|gb|EFH53517.1| glycoside hydrolase
           family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 487

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -3

Query: 265 FEGIRGQGVRVPVRIYGSREIPVTNVTFKGLLVGISYKKKHIFQCSYVQGRVIGRIFPAP 86
           + GI GQGVRVPVRI GS+EIPV NVTF+ + VGI+YKKKHIFQC+YV+GRVIG IFPAP
Sbjct: 399 YTGIYGQGVRVPVRIQGSKEIPVKNVTFRDMSVGITYKKKHIFQCAYVEGRVIGTIFPAP 458

Query: 85  CENLDIYDEDGRLVKQSTSDNNVDADYD 2
           CENLD YDE  RLVKQS S N  D DY+
Sbjct: 459 CENLDRYDEQERLVKQSDSQNATDIDYE 486


>gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
          Length = 201

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/88 (71%), Positives = 73/88 (82%)
 Frame = -3

Query: 265 FEGIRGQGVRVPVRIYGSREIPVTNVTFKGLLVGISYKKKHIFQCSYVQGRVIGRIFPAP 86
           F G+ GQGVRVPVRI+GS EIPV NVTF+ + VG++YKKKHIFQC++VQGRVIG IFPAP
Sbjct: 113 FIGVHGQGVRVPVRIHGSEEIPVRNVTFQDMSVGLTYKKKHIFQCAFVQGRVIGSIFPAP 172

Query: 85  CENLDIYDEDGRLVKQSTSDNNVDADYD 2
           CENLD+YDE   LVK+S S N  D DYD
Sbjct: 173 CENLDLYDEQENLVKRSASQNITDIDYD 200


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