BLASTX nr result

ID: Bupleurum21_contig00024377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024377
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603358.1| CGS1 mRNA stability [Medicago truncatula] gi...   102   4e-20
ref|XP_003523685.1| PREDICTED: uncharacterized protein LOC100780...    98   6e-19
ref|XP_003527787.1| PREDICTED: uncharacterized protein LOC100788...    96   4e-18
ref|XP_002324306.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002282789.2| PREDICTED: uncharacterized protein LOC100259...    95   5e-18

>ref|XP_003603358.1| CGS1 mRNA stability [Medicago truncatula] gi|355492406|gb|AES73609.1|
            CGS1 mRNA stability [Medicago truncatula]
          Length = 1714

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/98 (53%), Positives = 69/98 (70%), Gaps = 9/98 (9%)
 Frame = +3

Query: 6    RLKTLGIEVSPSVLDYLSRMVNSCADIAEAILKDIDCDED---------CSAMRFGKSGS 158
            RLK+LG++VSP VLD+LS+ +NS  D+AE IL+DIDCDED         C    FG+ G+
Sbjct: 1141 RLKSLGLDVSPCVLDFLSKTINSWGDVAETILRDIDCDEDYGESCTALPCGIFLFGEHGA 1200

Query: 159  SGDGSNASEEQRFRATSTFNFSDIYILMEMLSIPCLVI 272
            +  G +  +EQ FRA+   +FSDIYIL+EMLSIPCL +
Sbjct: 1201 AATGLHMIDEQAFRASR--HFSDIYILLEMLSIPCLAV 1236


>ref|XP_003523685.1| PREDICTED: uncharacterized protein LOC100780104 [Glycine max]
          Length = 1622

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/97 (52%), Positives = 66/97 (68%), Gaps = 9/97 (9%)
 Frame = +3

Query: 6    RLKTLGIEVSPSVLDYLSRMVNSCADIAEAILKDIDCDED---------CSAMRFGKSGS 158
            RLK LG+EVSP VLD+LS+ +NS  D+AE IL+DIDCD+D         C    FG+ G+
Sbjct: 1042 RLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDCGDSCSALPCGIFLFGEHGT 1101

Query: 159  SGDGSNASEEQRFRATSTFNFSDIYILMEMLSIPCLV 269
            +  G +  +EQ + A+   +FSDIYIL EMLSIPCLV
Sbjct: 1102 APSGLHVIDEQAYHASR--HFSDIYILFEMLSIPCLV 1136


>ref|XP_003527787.1| PREDICTED: uncharacterized protein LOC100788511 [Glycine max]
          Length = 1679

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/97 (51%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
 Frame = +3

Query: 6    RLKTLGIEVSPSVLDYLSRMVNSCADIAEAILKDIDCDED---------CSAMRFGKSGS 158
            RLK LG+EVSP VLD+LS+ +NS  D+AE IL+DIDCD+D         C    FG+  +
Sbjct: 1098 RLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDSCSALPCGIFLFGEHDT 1157

Query: 159  SGDGSNASEEQRFRATSTFNFSDIYILMEMLSIPCLV 269
            +  G +  +EQ + A+   +FSDIYIL EMLSIPCLV
Sbjct: 1158 APSGLHVIDEQAYHASR--HFSDIYILFEMLSIPCLV 1192


>ref|XP_002324306.1| predicted protein [Populus trichocarpa] gi|222865740|gb|EEF02871.1|
           predicted protein [Populus trichocarpa]
          Length = 852

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 9/99 (9%)
 Frame = +3

Query: 3   TRLKTLGIEVSPSVLDYLSRMVNSCADIAEAILKDIDCDED---------CSAMRFGKSG 155
           +RLK LG +VSP VLD+LS+ VNS  D+AE IL+DIDCD+D         C    FG++ 
Sbjct: 274 SRLKILGADVSPFVLDFLSKTVNSWGDVAETILRDIDCDDDLGDSCSTLPCGLFLFGENA 333

Query: 156 SSGDGSNASEEQRFRATSTFNFSDIYILMEMLSIPCLVI 272
           S+ +     +EQ F ++S  +FSDIYIL+EMLSIPCL +
Sbjct: 334 SAAERLQVVDEQTFHSSS--HFSDIYILIEMLSIPCLAL 370


>ref|XP_002282789.2| PREDICTED: uncharacterized protein LOC100259525 [Vitis vinifera]
            gi|296082057|emb|CBI21062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1683

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
 Frame = +3

Query: 6    RLKTLGIEVSPSVLDYLSRMVNSCADIAEAILKDIDCDED---------CSAMRFGKSGS 158
            +LK LG EVSP VLD+L++ VNS  D+AE IL+DIDCD+D         C    FG++G 
Sbjct: 1104 KLKHLGAEVSPCVLDFLNKTVNSWGDVAETILRDIDCDDDFGDNCSTIPCGLFLFGENGP 1163

Query: 159  SGDGSNASEEQRFRATSTFNFSDIYILMEMLSIPCLVI 272
            + +  +A +EQ F AT   +FSDIY+L+EMLSIPCL +
Sbjct: 1164 TSERLHAIDEQAFCATR--HFSDIYLLIEMLSIPCLAV 1199


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