BLASTX nr result

ID: Bupleurum21_contig00024363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024363
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268906.1| PREDICTED: probable complex I intermediate-a...   401   e-110
ref|XP_002890222.1| hypothetical protein ARALYDRAFT_471939 [Arab...   398   e-109
ref|XP_002314650.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108
ref|NP_173178.3| putative complex I intermediate-associated prot...   394   e-107
emb|CBI35820.3| unnamed protein product [Vitis vinifera]              394   e-107

>ref|XP_002268906.1| PREDICTED: probable complex I intermediate-associated protein
           30-like isoform 1 [Vitis vinifera]
          Length = 227

 Score =  401 bits (1030), Expect = e-110
 Identities = 186/226 (82%), Positives = 209/226 (92%)
 Frame = +3

Query: 15  MSRFRAALQASLSATKRALTWNVEDMIPPSERFIFNFNSKEELKKWHLYSDSEYGGLSSA 194
           MSRFR+  QASL+AT++ALTWNVE+ IPPSER+IFNFNSKEELKKWHLYSDSEYGG+SSA
Sbjct: 1   MSRFRSLWQASLNATRKALTWNVENWIPPSERYIFNFNSKEELKKWHLYSDSEYGGMSSA 60

Query: 195 SLEIPDSGNESSSTGIFSGNLSLDVTEGSKWNISRSGFCGMRSKKFDGFIDLDPYDTIAL 374
           SLEI D+GN  S TGIFSGNLSLD+ EGSKWNI R GFCGMRSKKFDGFIDL+ YDTIAL
Sbjct: 61  SLEIMDAGNGLSGTGIFSGNLSLDLIEGSKWNIRRGGFCGMRSKKFDGFIDLESYDTIAL 120

Query: 375 KLKGDGRCYISTIYTENWVNSPGQEEDNSWQAFVFVPKDDWYIAKIPLARYLPTWRGNVI 554
           K+KGDGRCYISTIYTENWVNSP Q+EDNSWQAFVFVPKD+WYI KIPLA YLPTWRGNVI
Sbjct: 121 KVKGDGRCYISTIYTENWVNSPAQQEDNSWQAFVFVPKDNWYITKIPLAHYLPTWRGNVI 180

Query: 555 DAQMEMNPSRVLGMSLSVNAECGIPGAMSGPGDFRIEIDWVKALRT 692
           DA++EMNPSR++GMSLSVN+  G+PGA +GPGDF++EIDW+KALRT
Sbjct: 181 DAEIEMNPSRIVGMSLSVNSGGGVPGATTGPGDFKLEIDWIKALRT 226


>ref|XP_002890222.1| hypothetical protein ARALYDRAFT_471939 [Arabidopsis lyrata subsp.
           lyrata] gi|297336064|gb|EFH66481.1| hypothetical protein
           ARALYDRAFT_471939 [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score =  398 bits (1023), Expect = e-109
 Identities = 187/225 (83%), Positives = 204/225 (90%)
 Frame = +3

Query: 15  MSRFRAALQASLSATKRALTWNVEDMIPPSERFIFNFNSKEELKKWHLYSDSEYGGLSSA 194
           MSRFR+ LQAS++ATK+ALTWNVE+ +PP+E+ IF FNSKE+LKKWHLYSDSEYGGLSSA
Sbjct: 1   MSRFRSLLQASVNATKKALTWNVEEWVPPAEKHIFKFNSKEDLKKWHLYSDSEYGGLSSA 60

Query: 195 SLEIPDSGNESSSTGIFSGNLSLDVTEGSKWNISRSGFCGMRSKKFDGFIDLDPYDTIAL 374
           SLEIPD G+ S  TGIFSGNLSLD++EGSKWNISRSGFCGMRSKKFDGFIDLD YD IAL
Sbjct: 61  SLEIPDKGDGSDCTGIFSGNLSLDLSEGSKWNISRSGFCGMRSKKFDGFIDLDGYDAIAL 120

Query: 375 KLKGDGRCYISTIYTENWVNSPGQEEDNSWQAFVFVPKDDWYIAKIPLARYLPTWRGNVI 554
           +L+GDGRCYISTIYTENWVNSPGQ EDNSWQAFVF PKD WY AKIPLARYLPTWRGNVI
Sbjct: 121 RLRGDGRCYISTIYTENWVNSPGQSEDNSWQAFVFAPKDSWYTAKIPLARYLPTWRGNVI 180

Query: 555 DAQMEMNPSRVLGMSLSVNAECGIPGAMSGPGDFRIEIDWVKALR 689
           D +MEMNP RVLGMSLSVNAE G  GA SG GDFR+EIDW+KALR
Sbjct: 181 DVEMEMNPGRVLGMSLSVNAEGGAVGAKSGAGDFRVEIDWIKALR 225


>ref|XP_002314650.1| predicted protein [Populus trichocarpa] gi|222863690|gb|EEF00821.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  395 bits (1014), Expect = e-108
 Identities = 189/226 (83%), Positives = 203/226 (89%)
 Frame = +3

Query: 15  MSRFRAALQASLSATKRALTWNVEDMIPPSERFIFNFNSKEELKKWHLYSDSEYGGLSSA 194
           MSRFR+  QASL ATK+ALTWNVED++PP+ER IFNFNS+EELKKWHLYSDSEYGG SSA
Sbjct: 1   MSRFRSLWQASLDATKKALTWNVEDLMPPTERLIFNFNSREELKKWHLYSDSEYGGSSSA 60

Query: 195 SLEIPDSGNESSSTGIFSGNLSLDVTEGSKWNISRSGFCGMRSKKFDGFIDLDPYDTIAL 374
           SLE  D GN     G+FSGNLSLDV EGSKWNISRSGFCGMRSKKFDGFIDLD YDTIAL
Sbjct: 61  SLEFMDEGN--GLKGVFSGNLSLDVAEGSKWNISRSGFCGMRSKKFDGFIDLDAYDTIAL 118

Query: 375 KLKGDGRCYISTIYTENWVNSPGQEEDNSWQAFVFVPKDDWYIAKIPLARYLPTWRGNVI 554
           KLKGDGR YISTIYTENWVNSPGQ EDNSWQAFVFVPKD+WYIA+IPLARYLPTWRGNVI
Sbjct: 119 KLKGDGRSYISTIYTENWVNSPGQMEDNSWQAFVFVPKDNWYIARIPLARYLPTWRGNVI 178

Query: 555 DAQMEMNPSRVLGMSLSVNAECGIPGAMSGPGDFRIEIDWVKALRT 692
           DA MEMN SR+LGMSLSVNA  GIPGA SGPGDF++E+DW+KA RT
Sbjct: 179 DASMEMNQSRILGMSLSVNAGGGIPGARSGPGDFKVELDWIKAFRT 224


>ref|NP_173178.3| putative complex I intermediate-associated protein 30 [Arabidopsis
           thaliana] gi|209572597|sp|Q9LQI7.2|CIA30_ARATH RecName:
           Full=Probable complex I intermediate-associated protein
           30 gi|117168231|gb|ABK32198.1| At1g17350 [Arabidopsis
           thaliana] gi|332191455|gb|AEE29576.1| putative complex I
           intermediate-associated protein 30 [Arabidopsis
           thaliana]
          Length = 227

 Score =  394 bits (1012), Expect = e-107
 Identities = 183/225 (81%), Positives = 204/225 (90%)
 Frame = +3

Query: 15  MSRFRAALQASLSATKRALTWNVEDMIPPSERFIFNFNSKEELKKWHLYSDSEYGGLSSA 194
           MSRFR+ LQAS++ATK+ALTWNVE+ +PP+E+ IF F+SKE+LKKWHLYSDSEYGGLSSA
Sbjct: 1   MSRFRSLLQASVNATKKALTWNVEEWVPPAEKHIFKFHSKEDLKKWHLYSDSEYGGLSSA 60

Query: 195 SLEIPDSGNESSSTGIFSGNLSLDVTEGSKWNISRSGFCGMRSKKFDGFIDLDPYDTIAL 374
           SLEIPD G+ S  TG+FSGNLS+D++EGSKWNISRSGFCGMRSKKFDGFIDLD YD IAL
Sbjct: 61  SLEIPDKGDGSDCTGVFSGNLSVDLSEGSKWNISRSGFCGMRSKKFDGFIDLDGYDAIAL 120

Query: 375 KLKGDGRCYISTIYTENWVNSPGQEEDNSWQAFVFVPKDDWYIAKIPLARYLPTWRGNVI 554
           +++GDGRCYISTIYTENWVNSPGQ EDNSWQAFVF PKD WY AKIPLARYLPTWRGNVI
Sbjct: 121 RIRGDGRCYISTIYTENWVNSPGQSEDNSWQAFVFAPKDSWYTAKIPLARYLPTWRGNVI 180

Query: 555 DAQMEMNPSRVLGMSLSVNAECGIPGAMSGPGDFRIEIDWVKALR 689
           D +MEMNP RVLGMSLSVNAE G  GA SG GDFR+EIDW+KALR
Sbjct: 181 DVEMEMNPGRVLGMSLSVNAEGGAVGAKSGAGDFRVEIDWIKALR 225


>emb|CBI35820.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  394 bits (1012), Expect = e-107
 Identities = 185/226 (81%), Positives = 208/226 (92%)
 Frame = +3

Query: 15  MSRFRAALQASLSATKRALTWNVEDMIPPSERFIFNFNSKEELKKWHLYSDSEYGGLSSA 194
           MSRFR+  QASL+AT++ALTWNVE+ IPPSER+IFNFNSKEELKKWHLYSDSEYGG+SSA
Sbjct: 1   MSRFRSLWQASLNATRKALTWNVENWIPPSERYIFNFNSKEELKKWHLYSDSEYGGMSSA 60

Query: 195 SLEIPDSGNESSSTGIFSGNLSLDVTEGSKWNISRSGFCGMRSKKFDGFIDLDPYDTIAL 374
           SLEI D+GN  S  GIFSGNLSLD+ EGSKWNI R GFCGMRSKKFDGFIDL+ YDTIAL
Sbjct: 61  SLEIMDAGNGLS--GIFSGNLSLDLIEGSKWNIRRGGFCGMRSKKFDGFIDLESYDTIAL 118

Query: 375 KLKGDGRCYISTIYTENWVNSPGQEEDNSWQAFVFVPKDDWYIAKIPLARYLPTWRGNVI 554
           K+KGDGRCYISTIYTENWVNSP Q+EDNSWQAFVFVPKD+WYI KIPLA YLPTWRGNVI
Sbjct: 119 KVKGDGRCYISTIYTENWVNSPAQQEDNSWQAFVFVPKDNWYITKIPLAHYLPTWRGNVI 178

Query: 555 DAQMEMNPSRVLGMSLSVNAECGIPGAMSGPGDFRIEIDWVKALRT 692
           DA++EMNPSR++GMSLSVN+  G+PGA +GPGDF++EIDW+KALRT
Sbjct: 179 DAEIEMNPSRIVGMSLSVNSGGGVPGATTGPGDFKLEIDWIKALRT 224


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