BLASTX nr result

ID: Bupleurum21_contig00024362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024362
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60895.1| hypothetical protein VITISV_023239 [Vitis vinifera]   451   e-124
ref|XP_002284741.1| PREDICTED: proteasome assembly chaperone 2 [...   449   e-124
ref|XP_002519122.1| conserved hypothetical protein [Ricinus comm...   437   e-120
ref|XP_002305403.1| predicted protein [Populus trichocarpa] gi|2...   422   e-116
ref|XP_003537911.1| PREDICTED: proteasome assembly chaperone 2-l...   413   e-113

>emb|CAN60895.1| hypothetical protein VITISV_023239 [Vitis vinifera]
          Length = 282

 Score =  451 bits (1161), Expect = e-124
 Identities = 213/282 (75%), Positives = 244/282 (86%), Gaps = 1/282 (0%)
 Frame = +3

Query: 108 MEFIIEDGKDLDQQCSTLVLPALSIGNVGQLAVDLLISSTRAEKIGYLDDPNVLPCIGND 287
           MEFI+E+GK L+  CSTLVLPALSIGNVGQLAVDLLISSTR E+IGYLDDP VLPC+GND
Sbjct: 1   MEFIVEEGKHLNNDCSTLVLPALSIGNVGQLAVDLLISSTRTERIGYLDDPYVLPCVGND 60

Query: 288 AYFPSPQPQLALPLEAYDSCSNELCFIQQRSPVVKGRMVEFAKNLADFAAANGKKHVVVL 467
           AY P P+ ++ALPLEAYDS  N+L  +QQRSPV+KG MVEFAKNLADFAA +GKKHV+VL
Sbjct: 61  AYGPIPRGEVALPLEAYDSSLNKLTLVQQRSPVLKGMMVEFAKNLADFAADSGKKHVIVL 120

Query: 468 SSLDFGRWQTIDMSSGLQIYYLSSSNMDGTDDDCERLGWKRIQEYNPTQRRWKYLNDLAG 647
           SSLDFG+WQ IDMSSG QIYY+SS+NMDGTDDDCE+LGWK++ EYNP QRRWKYL+ LA 
Sbjct: 121 SSLDFGQWQRIDMSSGSQIYYISSANMDGTDDDCEKLGWKKLHEYNPAQRRWKYLSTLAA 180

Query: 648 GEVVQEDTLLFEDELHD-EDYFPSLPFAAMFSCFKAKGLKVTCLLCYCSEGDNMPDSFQL 824
           G  +QED L  EDEL D EDY+PSLPFAA+FSCFKAKGLKVTCLLCYCSEGDN+PD+F L
Sbjct: 181 GNAMQEDGLPXEDELEDEEDYYPSLPFAALFSCFKAKGLKVTCLLCYCSEGDNIPDAFNL 240

Query: 825 AEAASKLVNLKDSNLQGNEGDKWTIPFSWQSVYGPPPDMSLF 950
           A+AA KL+ L   N  G++G  W IPFSW++VYGPPPDMSLF
Sbjct: 241 ADAACKLLELSPQNFHGDQGGNWAIPFSWKTVYGPPPDMSLF 282


>ref|XP_002284741.1| PREDICTED: proteasome assembly chaperone 2 [Vitis vinifera]
           gi|297741394|emb|CBI32525.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score =  449 bits (1154), Expect = e-124
 Identities = 212/282 (75%), Positives = 243/282 (86%), Gaps = 1/282 (0%)
 Frame = +3

Query: 108 MEFIIEDGKDLDQQCSTLVLPALSIGNVGQLAVDLLISSTRAEKIGYLDDPNVLPCIGND 287
           MEFI+E+GK L+  CSTLVLPALSIGNVGQLAVDLLISSTRAE+IGYLDDP VLPC+GND
Sbjct: 1   MEFIVEEGKHLNNDCSTLVLPALSIGNVGQLAVDLLISSTRAERIGYLDDPYVLPCVGND 60

Query: 288 AYFPSPQPQLALPLEAYDSCSNELCFIQQRSPVVKGRMVEFAKNLADFAAANGKKHVVVL 467
           AY P P+ ++ALPLEAYDS  N+L  +QQRSPV+KG MVEFAKNLA FAA +GKKHV+VL
Sbjct: 61  AYGPIPRGEVALPLEAYDSSLNKLTLVQQRSPVLKGMMVEFAKNLAYFAADSGKKHVIVL 120

Query: 468 SSLDFGRWQTIDMSSGLQIYYLSSSNMDGTDDDCERLGWKRIQEYNPTQRRWKYLNDLAG 647
           SSLDFG+WQ IDMSSG QIYY+SS+NMDG DDDCE+LGWK++ EYNP QRRWKYL+ LA 
Sbjct: 121 SSLDFGQWQRIDMSSGSQIYYISSANMDGADDDCEKLGWKKLHEYNPAQRRWKYLSTLAA 180

Query: 648 GEVVQEDTLLFEDELHD-EDYFPSLPFAAMFSCFKAKGLKVTCLLCYCSEGDNMPDSFQL 824
           G  +QED L FEDEL D EDY+PSLPFAA+ SCFKAKGLKVTCLLCYCSEGDN+PD+F L
Sbjct: 181 GNAMQEDGLAFEDELEDEEDYYPSLPFAALLSCFKAKGLKVTCLLCYCSEGDNIPDAFNL 240

Query: 825 AEAASKLVNLKDSNLQGNEGDKWTIPFSWQSVYGPPPDMSLF 950
           A+AA KL+ L   N  G++G  W IPFSW++VYGPPPDMSLF
Sbjct: 241 ADAACKLLELSPQNFHGDQGGNWAIPFSWKTVYGPPPDMSLF 282


>ref|XP_002519122.1| conserved hypothetical protein [Ricinus communis]
           gi|223541785|gb|EEF43333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 281

 Score =  437 bits (1125), Expect = e-120
 Identities = 204/281 (72%), Positives = 238/281 (84%)
 Frame = +3

Query: 108 MEFIIEDGKDLDQQCSTLVLPALSIGNVGQLAVDLLISSTRAEKIGYLDDPNVLPCIGND 287
           MEFI+E+GK L ++CSTLVLPALSIGNVGQLAVDLL+SS +AE+IGYLDDPNVLPC+GND
Sbjct: 1   MEFIVEEGKQLHKECSTLVLPALSIGNVGQLAVDLLVSSQKAERIGYLDDPNVLPCVGND 60

Query: 288 AYFPSPQPQLALPLEAYDSCSNELCFIQQRSPVVKGRMVEFAKNLADFAAANGKKHVVVL 467
           AY P P   LAL LEAYDS +N L  +QQRSPVVKG+MVEFA NLA+FAAA+GKKH ++L
Sbjct: 61  AYGPIPCGNLALSLEAYDSPANALTLVQQRSPVVKGKMVEFANNLAEFAAASGKKHAILL 120

Query: 468 SSLDFGRWQTIDMSSGLQIYYLSSSNMDGTDDDCERLGWKRIQEYNPTQRRWKYLNDLAG 647
           S LDFGRWQ IDMSSGLQ YYLSS+N DGTDDDCERLGWKR+QEYNP QR WKYL+ LA 
Sbjct: 121 SGLDFGRWQRIDMSSGLQTYYLSSTNSDGTDDDCERLGWKRLQEYNPAQRSWKYLSTLAE 180

Query: 648 GEVVQEDTLLFEDELHDEDYFPSLPFAAMFSCFKAKGLKVTCLLCYCSEGDNMPDSFQLA 827
           G  + ED L +EDEL +EDY+PSLPFAA++SCFKAKGLKVTCL CYCSEGDN+ D+F LA
Sbjct: 181 GNPMPEDRLPYEDELEEEDYYPSLPFAALYSCFKAKGLKVTCLFCYCSEGDNISDAFHLA 240

Query: 828 EAASKLVNLKDSNLQGNEGDKWTIPFSWQSVYGPPPDMSLF 950
           EAA K++ +   +  G E  KW IP+SW++VYGPPPDMS+F
Sbjct: 241 EAACKILGISAGHFHGEENVKWLIPYSWKTVYGPPPDMSIF 281


>ref|XP_002305403.1| predicted protein [Populus trichocarpa] gi|222848367|gb|EEE85914.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  422 bits (1085), Expect = e-116
 Identities = 204/281 (72%), Positives = 236/281 (83%)
 Frame = +3

Query: 108 MEFIIEDGKDLDQQCSTLVLPALSIGNVGQLAVDLLISSTRAEKIGYLDDPNVLPCIGND 287
           MEFIIE+GK L+++ STL+LPALSIGNVGQLAVDLL+SSTRAE+IGYLDDP +LPC+GND
Sbjct: 1   MEFIIEEGKCLNKETSTLILPALSIGNVGQLAVDLLVSSTRAERIGYLDDPYILPCVGND 60

Query: 288 AYFPSPQPQLALPLEAYDSCSNELCFIQQRSPVVKGRMVEFAKNLADFAAANGKKHVVVL 467
           AY P+P  +LALPLEAYDS +N +  +QQRSPVVKG MVEFA+NLADFA A G  HV+VL
Sbjct: 61  AYGPTPCGELALPLEAYDSRNNGVALVQQRSPVVKGMMVEFARNLADFAVATGMNHVLVL 120

Query: 468 SSLDFGRWQTIDMSSGLQIYYLSSSNMDGTDDDCERLGWKRIQEYNPTQRRWKYLNDLAG 647
           SSL+F R Q ID SSG+QI+YLSS+N DGTDD CERLGWK+ QEYNP QR WKYL+ LA 
Sbjct: 121 SSLEFMRLQKIDTSSGMQIFYLSSTNTDGTDDCCERLGWKKWQEYNPDQRSWKYLSSLAE 180

Query: 648 GEVVQEDTLLFEDELHDEDYFPSLPFAAMFSCFKAKGLKVTCLLCYCSEGDNMPDSFQLA 827
           G   QED L FEDE  DEDY+PSLPFAA+FSCFKAKG+KVTCLLCYCSEGDN P++F LA
Sbjct: 181 GNARQEDNLPFEDEPEDEDYYPSLPFAALFSCFKAKGIKVTCLLCYCSEGDNTPEAFSLA 240

Query: 828 EAASKLVNLKDSNLQGNEGDKWTIPFSWQSVYGPPPDMSLF 950
           EA SKL+ L   N  G EG KW IPFSW++VYGPPPD+S+F
Sbjct: 241 EATSKLLGLSIDNSHG-EGGKWLIPFSWRTVYGPPPDLSMF 280


>ref|XP_003537911.1| PREDICTED: proteasome assembly chaperone 2-like [Glycine max]
          Length = 280

 Score =  413 bits (1062), Expect = e-113
 Identities = 196/281 (69%), Positives = 230/281 (81%)
 Frame = +3

Query: 108 MEFIIEDGKDLDQQCSTLVLPALSIGNVGQLAVDLLISSTRAEKIGYLDDPNVLPCIGND 287
           MEF+ E+GK L + CSTL+LPALSIGNVGQL  DLLISS  +E++GYLDDPNVLPC+GND
Sbjct: 1   MEFVPEEGKHLHEDCSTLILPALSIGNVGQLVADLLISSMGSERVGYLDDPNVLPCVGND 60

Query: 288 AYFPSPQPQLALPLEAYDSCSNELCFIQQRSPVVKGRMVEFAKNLADFAAANGKKHVVVL 467
           AY P PQ  LALPLEAYDS SN L  IQQRSPVVKG M+EFAKN+ADF A +GKKH+VVL
Sbjct: 61  AYGPFPQGDLALPLEAYDSPSNALTIIQQRSPVVKGMMIEFAKNMADFLAGSGKKHIVVL 120

Query: 468 SSLDFGRWQTIDMSSGLQIYYLSSSNMDGTDDDCERLGWKRIQEYNPTQRRWKYLNDLAG 647
           SSLDFG+WQ +DMSSGLQIYYLSSSN +GTD++CE+LGWK++QEY+P+Q  WKYL+DLA 
Sbjct: 121 SSLDFGKWQKVDMSSGLQIYYLSSSNSNGTDENCEQLGWKKLQEYDPSQMHWKYLSDLAE 180

Query: 648 GEVVQEDTLLFEDELHDEDYFPSLPFAAMFSCFKAKGLKVTCLLCYCSEGDNMPDSFQLA 827
           G V  ED    EDEL +E+Y+ SLPFAA+FS  KAKGLKVTCLLCYCSEGDN+ D+FQL 
Sbjct: 181 GNVTVEDITSVEDELEEENYYASLPFAALFSFLKAKGLKVTCLLCYCSEGDNISDAFQLG 240

Query: 828 EAASKLVNLKDSNLQGNEGDKWTIPFSWQSVYGPPPDMSLF 950
           +A  KL+ L      G EG KW +P SW SVYGPPPD+S+F
Sbjct: 241 DAVCKLLQLSHPT-TGIEGGKWRVPLSWMSVYGPPPDVSIF 280


Top