BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024351
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   182   4e-44
emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]   182   4e-44
ref|XP_002528029.1| pentatricopeptide repeat-containing protein,...   176   3e-42
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
            chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  182 bits (462), Expect = 4e-44
 Identities = 89/139 (64%), Positives = 112/139 (80%)
 Frame = -2

Query: 585  LKRDFEAIPFVSAEIIKMYGACGAKDKAKIAFDTVSLKGSMTWTAIIEAYGSCGLYKEAI 406
            LK+DFE+IPFVSAEIIKMYG  GA  KAK+AF  +  KGSM WTAIIEAYG   LY++AI
Sbjct: 585  LKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAI 644

Query: 405  DLFKQMISNGSSPSHFTFGVVLSICDQAGFVDEACKVFNLITRTYKIKATEEHYTSIIGL 226
            +LF QM S+G  P+H+TF  VLSIC++A   D+AC +FNL++R Y+IKA+ EHY+SII L
Sbjct: 645  NLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHYSSIIEL 704

Query: 225  LTRVGRNEEAERFIKLRSA 169
            L RVGR E+A+RFI++RSA
Sbjct: 705  LNRVGRTEDAQRFIQMRSA 723


>emb|CAN65544.1| hypothetical protein VITISV_018576 [Vitis vinifera]
          Length = 664

 Score =  182 bits (462), Expect = 4e-44
 Identities = 89/139 (64%), Positives = 112/139 (80%)
 Frame = -2

Query: 585 LKRDFEAIPFVSAEIIKMYGACGAKDKAKIAFDTVSLKGSMTWTAIIEAYGSCGLYKEAI 406
           LK+DFE+IPFVSAEIIKMYG  GA  KAK+AF  +  KGSM WTAIIEAYG   LY++AI
Sbjct: 524 LKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAI 583

Query: 405 DLFKQMISNGSSPSHFTFGVVLSICDQAGFVDEACKVFNLITRTYKIKATEEHYTSIIGL 226
           +LF QM S+G  P+H+TF  VLSIC++A   D+AC +FNL++R Y+IKA+ EHY+SII L
Sbjct: 584 NLFHQMQSDGFIPNHYTFKAVLSICERAELADDACLIFNLMSRRYRIKASNEHYSSIIEL 643

Query: 225 LTRVGRNEEAERFIKLRSA 169
           L RVGR E+A+RFI++RSA
Sbjct: 644 LNRVGRTEDAQRFIQMRSA 662


>ref|XP_002528029.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532559|gb|EEF34347.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 208

 Score =  176 bits (446), Expect = 3e-42
 Identities = 83/141 (58%), Positives = 111/141 (78%)
 Frame = -2

Query: 585 LKRDFEAIPFVSAEIIKMYGACGAKDKAKIAFDTVSLKGSMTWTAIIEAYGSCGLYKEAI 406
           LK+  E+IPFVSAEI++MYG+CG    AK  F  + +KGSM WTAIIEA+G   L ++AI
Sbjct: 68  LKKHCESIPFVSAEIVRMYGSCGLNHIAKSFFHAIPVKGSMAWTAIIEAHGHNNLQRDAI 127

Query: 405 DLFKQMISNGSSPSHFTFGVVLSICDQAGFVDEACKVFNLITRTYKIKATEEHYTSIIGL 226
            LF +MIS G +P+HFTF VVL+ICDQAGF D+AC++F L++R YKIKA+EEHY+ +IGL
Sbjct: 128 HLFHEMISGGFTPTHFTFTVVLNICDQAGFADDACRIFELMSRRYKIKASEEHYSVLIGL 187

Query: 225 LTRVGRNEEAERFIKLRSAMS 163
           LTR GR +EA++F ++ S+ S
Sbjct: 188 LTRAGRIQEAKKFTQMSSSSS 208


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  169 bits (428), Expect = 3e-40
 Identities = 81/132 (61%), Positives = 102/132 (77%)
 Frame = -2

Query: 585 LKRDFEAIPFVSAEIIKMYGACGAKDKAKIAFDTVSLKGSMTWTAIIEAYGSCGLYKEAI 406
           LKR FE + FVSAE++K+YG CGA   AK+ F+ + +KG MTWTAIIEAYG  G ++EAI
Sbjct: 548 LKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAI 607

Query: 405 DLFKQMISNGSSPSHFTFGVVLSICDQAGFVDEACKVFNLITRTYKIKATEEHYTSIIGL 226
           DLF +M S G SP+HFTF VVLSIC +AGFVDEA ++F L++  YKIK +EEHY+ +I +
Sbjct: 608 DLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAI 667

Query: 225 LTRVGRNEEAER 190
           LTR GR EEA R
Sbjct: 668 LTRFGRLEEARR 679


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  169 bits (428), Expect = 3e-40
 Identities = 81/132 (61%), Positives = 102/132 (77%)
 Frame = -2

Query: 585 LKRDFEAIPFVSAEIIKMYGACGAKDKAKIAFDTVSLKGSMTWTAIIEAYGSCGLYKEAI 406
           LKR FE + FVSAE++K+YG CGA   AK+ F+ + +KG MTWTAIIEAYG  G ++EAI
Sbjct: 548 LKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAI 607

Query: 405 DLFKQMISNGSSPSHFTFGVVLSICDQAGFVDEACKVFNLITRTYKIKATEEHYTSIIGL 226
           DLF +M S G SP+HFTF VVLSIC +AGFVDEA ++F L++  YKIK +EEHY+ +I +
Sbjct: 608 DLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAI 667

Query: 225 LTRVGRNEEAER 190
           LTR GR EEA R
Sbjct: 668 LTRFGRLEEARR 679