BLASTX nr result

ID: Bupleurum21_contig00024349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024349
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264...    81   1e-13
ref|XP_002525990.1| protein with unknown function [Ricinus commu...    75   6e-12
emb|CBI26839.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatul...    65   6e-09

>ref|XP_002314789.1| predicted protein [Populus trichocarpa] gi|222863829|gb|EEF00960.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 55/132 (41%), Positives = 73/132 (55%)
 Frame = -3

Query: 398 LKCDHRRPKTSNSFARSTHAYNSNGDNRQSRPYFGQARQVEDTRADKWNFVENEREYQDA 219
           LKCDHRRPK SN    ST   +  G    +    G         AD W FVE ERE  + 
Sbjct: 297 LKCDHRRPKASNCLKSSTELEHGKGGVHGTHHNRG---------ADVWRFVEEERE-DNH 346

Query: 218 SNSGNVISSLVDFPVTGGRTNLSRSVQQQASWKKEMAERNKSIAEAKENADEFKAAIMER 39
           S S N     VDFP+ GG+++LS++ Q++  WK EM ER+K     +E+  EF+ A  +R
Sbjct: 347 SISSNEGVRFVDFPIAGGKSSLSQNAQKRERWKLEMLERSKGGVHVEEDEKEFEYANTQR 406

Query: 38  RPKYSESTQDDE 3
           R KY EST D++
Sbjct: 407 RFKYLESTDDED 418


>ref|XP_002281205.1| PREDICTED: uncharacterized protein LOC100264495 [Vitis vinifera]
          Length = 528

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
 Frame = -3

Query: 398 LKCDHRRPKTSNSFARSTHAYNS---------NGDNRQSRPYFGQARQVEDTRADKWNFV 246
           LKCDH+RPK S         ++S         + D         Q  Q  +    +W FV
Sbjct: 377 LKCDHKRPKASAQPGHEIQGFSSYHKGSRFVKDEDETSGELPIRQETQSPNNGTARWRFV 436

Query: 245 ENEREYQDASNSGNVISSLVDFPVTGGRTNLSRSVQQQASWKKEMAERNKSIAEAKENAD 66
           E+E +  D S S + IS  VDFP+ GG++ LS++  +++ WK EM E+++  +   E+  
Sbjct: 437 EDESKDIDGSKSWDGISGFVDFPIAGGKSELSQNSSKRSKWKAEMLEKSRPHSRGGES-- 494

Query: 65  EFKAAIMERRPKYSESTQDDE 3
             ++A ++RRP++ E + D+E
Sbjct: 495 --RSASLQRRPEFVECSSDEE 513


>ref|XP_002525990.1| protein with unknown function [Ricinus communis]
           gi|223534722|gb|EEF36414.1| protein with unknown
           function [Ricinus communis]
          Length = 557

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
 Frame = -3

Query: 398 LKCDHRRPKTSNS------------FARSTHAYNSNGDNRQSRPYFGQARQVEDTR-ADK 258
           LKCDHRRPK  +S            + + +    +N +N+ +     +  ++   R A  
Sbjct: 382 LKCDHRRPKALSSPNNKSTKHDNGDYPKHSRLKINNSENKDADDKCSKHDRINQIRGAGM 441

Query: 257 WNFVENEREYQDASNSGNVISSLVDFPVTGGRTNLSRSVQQQASWKKEMAERNKSIAEAK 78
           W FVE E E  D SN  +  S  +DFP+ GG+++LS++ Q++  WK EM E +K+ A+  
Sbjct: 442 WRFVEGEIEGND-SNLWDKDSRFLDFPIVGGKSSLSQNEQKRERWKIEMLENSKA-AKRT 499

Query: 77  ENADEFKAAIMERRPKYSESTQDDE 3
            ++DE +    +R  KY E+T D++
Sbjct: 500 RDSDEVRYNDTQRTFKYLETTDDED 524


>emb|CBI26839.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/132 (31%), Positives = 68/132 (51%)
 Frame = -3

Query: 398 LKCDHRRPKTSNSFARSTHAYNSNGDNRQSRPYFGQARQVEDTRADKWNFVENEREYQDA 219
           LKCDH+RPK S         ++S                        W FVE+E +  D 
Sbjct: 291 LKCDHKRPKASAQPGHEIQGFSSYHKG--------------------WRFVEDESKDIDG 330

Query: 218 SNSGNVISSLVDFPVTGGRTNLSRSVQQQASWKKEMAERNKSIAEAKENADEFKAAIMER 39
           S S + IS  VDFP+ GG++ LS++  +++ WK EM E+++  +   E+    ++A ++R
Sbjct: 331 SKSWDGISGFVDFPIAGGKSELSQNSSKRSKWKAEMLEKSRPHSRGGES----RSASLQR 386

Query: 38  RPKYSESTQDDE 3
           RP++ E + D+E
Sbjct: 387 RPEFVECSSDEE 398


>ref|XP_003637681.1| Zinc finger protein VAR3 [Medicago truncatula]
           gi|355503616|gb|AES84819.1| Zinc finger protein VAR3
           [Medicago truncatula]
          Length = 560

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
 Frame = -3

Query: 398 LKCDHRRPKTSNSFARSTHAYNSNGDNR----QSRPYFG-------------QARQVEDT 270
           LKCDHRRPK SN+   S  +  S G++R    +SRP F                R+  + 
Sbjct: 411 LKCDHRRPKVSNA---SNSSPQSQGEDRNHYEKSRPTFAGYWFDGNKESPMASERKSRNR 467

Query: 269 RADKWNFVENEREYQDASNSGNVISSLVDFPVTGGRTNLSRSVQQQASWKKEMAERNKSI 90
            + KW FVE   E      + N  S  +DFP+ GG+T++S   Q+   +K E+  ++K  
Sbjct: 468 DSHKWRFVEEGIENHKYLENSNDSSEYLDFPIAGGKTSMSEP-QRGEVYKNELPNQSKRH 526

Query: 89  AEAKENADEFKAAIMERRPKYSESTQDDE 3
           A   E  DEF ++        + ST DDE
Sbjct: 527 AWQSEADDEFCSS-------DNPSTDDDE 548


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