BLASTX nr result

ID: Bupleurum21_contig00024343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024343
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   137   7e-31
emb|CBI32615.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   130   1e-28
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   129   3e-28
ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   121   5e-26

>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/111 (63%), Positives = 81/111 (72%)
 Frame = -1

Query: 334  FLFGFKVRSRYFRLAALGQRQNQPXXXXXXXXXXXNIGQLNTTSLPRKKFLVRRDQILES 155
            FLFGF+ R +YFRLAA G  Q QP           +  + N  SLPRKKFLV RD+IL+S
Sbjct: 1130 FLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSDRRHNAGSLPRKKFLVCRDRILDS 1189

Query: 154  ATKMMNLHASQVVVLEAEFEDEIGTGLGPTLEFYTLVSYEFQKLGLGMWRE 2
            A +MMNLHA Q VVLE E+ +E+GTGLGPTLEFYTLV +EFQK GLGMWRE
Sbjct: 1190 AAQMMNLHACQKVVLEVEYNEEVGTGLGPTLEFYTLVCHEFQKTGLGMWRE 1240


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/111 (63%), Positives = 81/111 (72%)
 Frame = -1

Query: 334  FLFGFKVRSRYFRLAALGQRQNQPXXXXXXXXXXXNIGQLNTTSLPRKKFLVRRDQILES 155
            FLFGF+ R +YFRLAA G  Q QP           +  + N  SLPRKKFLV RD+IL+S
Sbjct: 1086 FLFGFEARCKYFRLAAFGPLQAQPHSSFHNTSGAPSDRRHNAGSLPRKKFLVCRDRILDS 1145

Query: 154  ATKMMNLHASQVVVLEAEFEDEIGTGLGPTLEFYTLVSYEFQKLGLGMWRE 2
            A +MMNLHA Q VVLE E+ +E+GTGLGPTLEFYTLV +EFQK GLGMWRE
Sbjct: 1146 AAQMMNLHACQKVVLEVEYNEEVGTGLGPTLEFYTLVCHEFQKTGLGMWRE 1196


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/111 (61%), Positives = 79/111 (71%)
 Frame = -1

Query: 334  FLFGFKVRSRYFRLAALGQRQNQPXXXXXXXXXXXNIGQLNTTSLPRKKFLVRRDQILES 155
            FLF F+ R +YFRLAA GQ Q QP              +L+   LPRKKFLV RD+ILES
Sbjct: 1116 FLFSFEARCKYFRLAAFGQPQVQPSHNGSGTVSDR---RLSPGGLPRKKFLVHRDRILES 1172

Query: 154  ATKMMNLHASQVVVLEAEFEDEIGTGLGPTLEFYTLVSYEFQKLGLGMWRE 2
            A +MM+LHAS  VVLE E+++E+GTGLGPTLEFYTLV  EFQK GL MWRE
Sbjct: 1173 AAQMMDLHASNKVVLEVEYDEEVGTGLGPTLEFYTLVCQEFQKSGLAMWRE 1223


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  129 bits (323), Expect = 3e-28
 Identities = 67/111 (60%), Positives = 79/111 (71%)
 Frame = -1

Query: 334  FLFGFKVRSRYFRLAALGQRQNQPXXXXXXXXXXXNIGQLNTTSLPRKKFLVRRDQILES 155
            FLF F+ R +YF+L A GQ Q QP           +  +L    LPRKKFLV RD+ILES
Sbjct: 1115 FLFSFEARCKYFKLEAFGQPQVQPHISHNGSGTVSD-RRLGPGGLPRKKFLVHRDRILES 1173

Query: 154  ATKMMNLHASQVVVLEAEFEDEIGTGLGPTLEFYTLVSYEFQKLGLGMWRE 2
            A +MM+LHAS  VVLE E+++E+GTGLGPTLEFYTLV  EFQK GLGMWRE
Sbjct: 1174 AAQMMDLHASNKVVLEVEYDEEVGTGLGPTLEFYTLVCQEFQKSGLGMWRE 1224


>ref|XP_004170016.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            UPL4-like, partial [Cucumis sativus]
          Length = 1456

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/110 (56%), Positives = 77/110 (70%)
 Frame = -1

Query: 334  FLFGFKVRSRYFRLAALGQRQNQPXXXXXXXXXXXNIGQLNTTSLPRKKFLVRRDQILES 155
            FLF F+ R +YFR+   G  Q Q            N G+ ++  LPRKK LV R QIL+S
Sbjct: 1062 FLFSFEARRKYFRIVVFGMPQYQLHARSHSDFGTSNDGRSSSGGLPRKKVLVHRSQILDS 1121

Query: 154  ATKMMNLHASQVVVLEAEFEDEIGTGLGPTLEFYTLVSYEFQKLGLGMWR 5
            A+KMMN +A+Q V+LE E+++E+GTGLGPTLEFYTLVS EFQK GLGMWR
Sbjct: 1122 ASKMMNQYANQKVLLEVEYDEEVGTGLGPTLEFYTLVSREFQKNGLGMWR 1171


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