BLASTX nr result

ID: Bupleurum21_contig00024336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024336
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   155   2e-35
ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   145   1e-32
gb|ACU20250.1| unknown [Glycine max]                                  143   8e-32
gb|ABK26743.1| unknown [Picea sitchensis]                             142   1e-31
ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [M...   140   7e-31

>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
            gi|298205010|emb|CBI34317.3| unnamed protein product
            [Vitis vinifera]
          Length = 287

 Score =  155 bits (392), Expect = 2e-35
 Identities = 71/78 (91%), Positives = 76/78 (97%)
 Frame = -3

Query: 1038 LSARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNSEDAAEAKHHMNHTVIGG 859
            L ARPEDLR+PFERFGPVKDVYLPKNYYTGEPRGFGFVKFRN+EDAAEAKHH+NH+VIGG
Sbjct: 53   LDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHLNHSVIGG 112

Query: 858  REIAIVFAAENRKTPQDM 805
            REIAIVFA ENRKTPQ+M
Sbjct: 113  REIAIVFAEENRKTPQEM 130


>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
            gi|449495419|ref|XP_004159835.1| PREDICTED:
            uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  145 bits (367), Expect = 1e-32
 Identities = 69/78 (88%), Positives = 72/78 (92%)
 Frame = -3

Query: 1038 LSARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNSEDAAEAKHHMNHTVIGG 859
            L ARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFR +EDAAEAK  +NHTVIGG
Sbjct: 59   LDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQLNHTVIGG 118

Query: 858  REIAIVFAAENRKTPQDM 805
            REI IVFA ENRKTPQ+M
Sbjct: 119  REIRIVFAEENRKTPQEM 136


>gb|ACU20250.1| unknown [Glycine max]
          Length = 270

 Score =  143 bits (360), Expect = 8e-32
 Identities = 66/78 (84%), Positives = 71/78 (91%)
 Frame = -3

Query: 1038 LSARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNSEDAAEAKHHMNHTVIGG 859
            L ARPEDLRIPFER+GPVKDVYLPKNYYTGEPRGFGFVK+R  EDAAEAK H+NHT+IGG
Sbjct: 58   LDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHLNHTIIGG 117

Query: 858  REIAIVFAAENRKTPQDM 805
            REI IVFA ENRKT Q+M
Sbjct: 118  REIRIVFAEENRKTSQEM 135


>gb|ABK26743.1| unknown [Picea sitchensis]
          Length = 252

 Score =  142 bits (358), Expect = 1e-31
 Identities = 66/78 (84%), Positives = 71/78 (91%)
 Frame = -3

Query: 1038 LSARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNSEDAAEAKHHMNHTVIGG 859
            L ARPEDLRIPFERFGPVKDVYLPKN+YT EPRGFGFVK+RN +DAAEAK HMNH VIGG
Sbjct: 64   LDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRHMNHQVIGG 123

Query: 858  REIAIVFAAENRKTPQDM 805
            REI+IVFA ENRK PQ+M
Sbjct: 124  REISIVFAEENRKNPQEM 141


>ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
            gi|355510621|gb|AES91763.1| Splicing factor,
            arginine/serine-rich 13A [Medicago truncatula]
          Length = 192

 Score =  140 bits (352), Expect = 7e-31
 Identities = 64/78 (82%), Positives = 71/78 (91%)
 Frame = -3

Query: 1038 LSARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNSEDAAEAKHHMNHTVIGG 859
            L ARPEDLR PFER+GPVKDVYLP+NYYTGEPRGFGFVK+R+ EDAAEAK  +NHT+IGG
Sbjct: 57   LDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQLNHTIIGG 116

Query: 858  REIAIVFAAENRKTPQDM 805
            REI IVFA ENRKTPQ+M
Sbjct: 117  REIRIVFAEENRKTPQEM 134


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