BLASTX nr result

ID: Bupleurum21_contig00024325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024325
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74977.1| hypothetical protein VITISV_027197 [Vitis vinifera]   114   7e-24
ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260...   112   4e-23
ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256...   112   4e-23
ref|XP_003545974.1| PREDICTED: uncharacterized protein LOC100527...   109   2e-22

>emb|CAN74977.1| hypothetical protein VITISV_027197 [Vitis vinifera]
          Length = 269

 Score =  114 bits (286), Expect = 7e-24
 Identities = 55/75 (73%), Positives = 62/75 (82%)
 Frame = -1

Query: 225 MESYTFFVICILHSVVASSCGAMMMFYGNELVVFSHGKDTASKLMGSTPHDQLLIQTSDS 46
           M S  FF+ CILHSV+A +CGA+MMFY NE+ VF HG + A KL GSTPHDQLLI+TSDS
Sbjct: 1   MGSAAFFLTCILHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 45  FSGLLLFAIGFLLMM 1
           FSGLLLFAIGFLL M
Sbjct: 61  FSGLLLFAIGFLLFM 75


>ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|222869756|gb|EEF06887.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/75 (73%), Positives = 63/75 (84%)
 Frame = -1

Query: 225 MESYTFFVICILHSVVASSCGAMMMFYGNELVVFSHGKDTASKLMGSTPHDQLLIQTSDS 46
           M S  FF+IC+LHSV+A +CGA+MMFY NE  VF HG + A+KL GSTPHDQLL+QTSDS
Sbjct: 1   MGSSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDS 60

Query: 45  FSGLLLFAIGFLLMM 1
           FSGLLLFAIGFLL M
Sbjct: 61  FSGLLLFAIGFLLFM 75


>ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera]
          Length = 144

 Score =  112 bits (280), Expect = 4e-23
 Identities = 54/75 (72%), Positives = 61/75 (81%)
 Frame = -1

Query: 225 MESYTFFVICILHSVVASSCGAMMMFYGNELVVFSHGKDTASKLMGSTPHDQLLIQTSDS 46
           M S  FF+ C LHSV+A +CGA+MMFY NE+ VF HG + A KL GSTPHDQLLI+TSDS
Sbjct: 1   MGSAAFFLTCSLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 45  FSGLLLFAIGFLLMM 1
           FSGLLLFAIGFLL M
Sbjct: 61  FSGLLLFAIGFLLFM 75


>ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera]
           gi|297735997|emb|CBI23971.3| unnamed protein product
           [Vitis vinifera]
          Length = 150

 Score =  112 bits (280), Expect = 4e-23
 Identities = 53/80 (66%), Positives = 65/80 (81%)
 Frame = -1

Query: 240 TLLMIMESYTFFVICILHSVVASSCGAMMMFYGNELVVFSHGKDTASKLMGSTPHDQLLI 61
           T+  +  S  FFVIC+LHS++A +CG +MMFY  E+  F HG +TA+KL+GSTPHDQLLI
Sbjct: 2   TVQSMGSSSGFFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLI 61

Query: 60  QTSDSFSGLLLFAIGFLLMM 1
           +TSDSFSGLLLFAIGFLL M
Sbjct: 62  RTSDSFSGLLLFAIGFLLFM 81


>ref|XP_003545974.1| PREDICTED: uncharacterized protein LOC100527898 [Glycine max]
          Length = 148

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = -1

Query: 225 MESYTFFVICILHSVVASSCGAMMMFYGNELVVFSHGKDTASKLMGSTPHDQLLIQTSDS 46
           M S  F VICILHSV+A +CGA+MMFY  E+  F HG   A+KL+GSTPHDQLLI+TSDS
Sbjct: 5   MASSAFMVICILHSVIAMTCGALMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDS 64

Query: 45  FSGLLLFAIGFLLMM 1
           FSGLLL AIGFLL M
Sbjct: 65  FSGLLLVAIGFLLFM 79


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