BLASTX nr result

ID: Bupleurum21_contig00024324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024324
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max]        130   1e-28
ref|XP_004146601.1| PREDICTED: protein LOL2-like [Cucumis sativu...   129   2e-28
ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|...   129   2e-28
gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia s...   127   9e-28
ref|XP_002305138.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26

>ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max]
          Length = 128

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/84 (72%), Positives = 68/84 (80%)
 Frame = -2

Query: 448 QMVCGSCHCLLSYALGAKYVQCSSCQTVNLVLEAHQVGQVKCGGCEVLLMYQYGANAVQC 269
           QMVCGSC  LLSY  GAK+V+CS CQTVN+VLEA QVGQVKCG C VLLMY YGA+ V+C
Sbjct: 37  QMVCGSCRRLLSYPRGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYPYGASQVRC 96

Query: 268 SSCRHVTDIGVQNSRPPLSVQQAR 197
           SSCR VT+IG  N RPP SVQQ +
Sbjct: 97  SSCRFVTEIGAHNKRPPWSVQQRK 120


>ref|XP_004146601.1| PREDICTED: protein LOL2-like [Cucumis sativus]
           gi|449508900|ref|XP_004163439.1| PREDICTED: protein
           LOL2-like [Cucumis sativus]
          Length = 131

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/91 (65%), Positives = 68/91 (74%)
 Frame = -2

Query: 448 QMVCGSCHCLLSYALGAKYVQCSSCQTVNLVLEAHQVGQVKCGGCEVLLMYQYGANAVQC 269
           QMVCG+C  LL Y  GA+YVQCS C TVN VLEAH+VGQVKCG C VLLMY YGA++V+C
Sbjct: 39  QMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASSVRC 98

Query: 268 SSCRHVTDIGVQNSRPPLSVQQARGRQRRNF 176
           SSC  VT+IGV N RPP SV Q +     NF
Sbjct: 99  SSCTSVTEIGVHNRRPPWSVHQGQAAPPTNF 129


>ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera]
           gi|302144197|emb|CBI23324.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/82 (74%), Positives = 67/82 (81%)
 Frame = -2

Query: 448 QMVCGSCHCLLSYALGAKYVQCSSCQTVNLVLEAHQVGQVKCGGCEVLLMYQYGANAVQC 269
           QMVCGSC  LLSY  G ++V+CS CQTVN VLEAHQVGQVKCG C VLLMY YGA +V+C
Sbjct: 48  QMVCGSCRRLLSYPQGTRHVECSCCQTVNFVLEAHQVGQVKCGSCAVLLMYPYGAPSVRC 107

Query: 268 SSCRHVTDIGVQNSRPPLSVQQ 203
           SSCR VT+IGV N R PLSVQQ
Sbjct: 108 SSCRFVTEIGVHNRRLPLSVQQ 129


>gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia sinensis]
          Length = 236

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/86 (70%), Positives = 66/86 (76%)
 Frame = -2

Query: 451 GQMVCGSCHCLLSYALGAKYVQCSSCQTVNLVLEAHQVGQVKCGGCEVLLMYQYGANAVQ 272
           GQMVCGSC  LLSY  GA+ V+C  CQTVN  LE H+VGQVKCGGC VLLMY YGA  V+
Sbjct: 143 GQMVCGSCQELLSYPRGARLVRCLCCQTVNYCLEEHEVGQVKCGGCAVLLMYPYGAPFVK 202

Query: 271 CSSCRHVTDIGVQNSRPPLSVQQARG 194
           CSSC  VT+IG  N RPPLSVQQ RG
Sbjct: 203 CSSCCFVTEIGEHNRRPPLSVQQGRG 228


>ref|XP_002305138.1| predicted protein [Populus trichocarpa] gi|222848102|gb|EEE85649.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/81 (69%), Positives = 65/81 (80%)
 Frame = -2

Query: 445 MVCGSCHCLLSYALGAKYVQCSSCQTVNLVLEAHQVGQVKCGGCEVLLMYQYGANAVQCS 266
           MVCGSC  LLSY  G ++VQC  CQ +N VLEAH+VGQVKCG C+VLLMY YGA++V+CS
Sbjct: 1   MVCGSCRRLLSYPKGVRHVQCQCCQMINFVLEAHEVGQVKCGSCDVLLMYPYGASSVRCS 60

Query: 265 SCRHVTDIGVQNSRPPLSVQQ 203
           SCR VT+IG QN RPP SV Q
Sbjct: 61  SCRFVTEIGEQNRRPPWSVIQ 81


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