BLASTX nr result

ID: Bupleurum21_contig00024320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024320
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308444.1| transcription factor E2F [Populus trichocarp...    75   7e-12
ref|XP_002523865.1| E2F4,5, putative [Ricinus communis] gi|22353...    73   3e-11
ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis ...    71   8e-11
emb|CBI30368.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    70   2e-10

>ref|XP_002308444.1| transcription factor E2F [Populus trichocarpa]
           gi|222854420|gb|EEE91967.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 424

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -3

Query: 202 REMQEKLRDLSEDETNQKRLFVTDEDIKSLPCFKNETLIGL 80
           REMQE+LRDLSEDE NQKRLFVT+EDIKSLPCF NETLI +
Sbjct: 213 REMQERLRDLSEDENNQKRLFVTEEDIKSLPCFLNETLIAI 253


>ref|XP_002523865.1| E2F4,5, putative [Ricinus communis] gi|223536953|gb|EEF38591.1|
           E2F4,5, putative [Ricinus communis]
          Length = 414

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = -3

Query: 202 REMQEKLRDLSEDETNQKRLFVTDEDIKSLPCFKNETLIGL 80
           REMQE+LRDLSEDE NQK LFVT+EDIKSLPCF+NETLI +
Sbjct: 238 REMQERLRDLSEDENNQKWLFVTEEDIKSLPCFQNETLIAI 278


>ref|XP_002275458.2| PREDICTED: transcription factor E2FA [Vitis vinifera]
          Length = 498

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = -3

Query: 202 REMQEKLRDLSEDETNQKRLFVTDEDIKSLPCFKNETLIGL 80
           REMQEKLRDLSEDE NQK LFVT++DIK LPCF+NETLI +
Sbjct: 244 REMQEKLRDLSEDENNQKWLFVTEDDIKGLPCFQNETLIAI 284


>emb|CBI30368.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/41 (80%), Positives = 37/41 (90%)
 Frame = -3

Query: 202 REMQEKLRDLSEDETNQKRLFVTDEDIKSLPCFKNETLIGL 80
           REMQEKLRDLSEDE NQK LFVT++DIK LPCF+NETLI +
Sbjct: 244 REMQEKLRDLSEDENNQKWLFVTEDDIKGLPCFQNETLIAI 284


>ref|XP_004166944.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor E2FB-like
           [Cucumis sativus]
          Length = 462

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = -3

Query: 202 REMQEKLRDLSEDETNQKRLFVTDEDIKSLPCFKNETLIGL 80
           REMQE+LRDLSEDE NQ+ LFVT+EDIK LPCF+NETLI +
Sbjct: 240 REMQERLRDLSEDENNQRWLFVTEEDIKGLPCFQNETLIAI 280


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