BLASTX nr result

ID: Bupleurum21_contig00024316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024316
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...   175   1e-41
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...   164   2e-38
ref|XP_002511928.1| conserved hypothetical protein [Ricinus comm...   162   8e-38
ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799...   162   1e-37
gb|ACU19833.1| unknown [Glycine max]                                  160   4e-37

>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  175 bits (443), Expect = 1e-41
 Identities = 91/225 (40%), Positives = 145/225 (64%), Gaps = 1/225 (0%)
 Frame = +3

Query: 36  MVEKEQENPLAPQSHRIAIANDTITPQSTDDIERKRVRKRFVQCCGCTSAXXXXXXXXXX 215
           MVE+EQ  PLAP SHR++  +D +T    + + R R R+R ++C GC +A          
Sbjct: 1   MVEREQVRPLAPASHRLSSEDDKVT----NHLSRLR-RRRCIKCWGCIAATILIQAAVVI 55

Query: 216 XXXXXXXXXXDPKINLNYVTIRGLQGINPANLV-PNTNLTIIADVSVKNPNIASFRFKNA 392
                     DP I LN  T+  L+ IN      P  N+++ ADVSVKNPN ASFR+KN 
Sbjct: 56  ILVFTVFRVKDPVIKLNGFTVDKLELINGTTTPGPGVNMSLTADVSVKNPNFASFRYKNT 115

Query: 393 TTEIYYEDVLIGVAQIPQGNAKAKKTIQLNVTLDFLLEKILRVPRLVGDLTAGSLPVSTK 572
           TT ++Y   +IG A+ P G AKA++T+++NVT++ +L+ ++  P L+ D+++G LP++T 
Sbjct: 116 TTTLFYSGTVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNPSLLTDISSGILPMNTY 175

Query: 573 TSIRGRVEIIEIVKKTVGVKLDCTLTVIIANQTVQDQTCKRSVKL 707
           + + GRV++++I+KK V VK++C++TV I ++++Q+Q CKR V L
Sbjct: 176 SRVPGRVKMLKIIKKHVVVKMNCSVTVNITSRSIQEQKCKRDVNL 220


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score =  164 bits (415), Expect = 2e-38
 Identities = 90/229 (39%), Positives = 141/229 (61%), Gaps = 5/229 (2%)
 Frame = +3

Query: 36  MVEKEQENPLAPQSHRIAIANDTITPQSTDDIERKRVRKRFVQCCGCTSAXXXXXXXXXX 215
           MVE++Q  PLAP S R   ++D  T   T +I+++  ++R  + C C S           
Sbjct: 1   MVERDQVRPLAPASDRPHSSDDDDT---TLNIKKRFHQRRCFKYCACVSTFVFLVAIIII 57

Query: 216 XXXXXXXXXXDPKINLNYVTIRGLQGINPANLV-----PNTNLTIIADVSVKNPNIASFR 380
                     DP I +N VTI  L  +N +  +     P +N+TI ADVSVKNPN +SF+
Sbjct: 58  ILIFTVFKIKDPIITMNGVTIEKLDLVNTSGTLLPIPKPGSNMTIKADVSVKNPNYSSFK 117

Query: 381 FKNATTEIYYEDVLIGVAQIPQGNAKAKKTIQLNVTLDFLLEKILRVPRLVGDLTAGSLP 560
           + N TT I Y D +IG A+ P G +KA+KT+++NVT+D + +KI+  P L  D+++G L 
Sbjct: 118 YSNTTTTISYRDAVIGEARGPPGKSKARKTMRMNVTIDIMTDKIMSHPGLQDDISSGLLT 177

Query: 561 VSTKTSIRGRVEIIEIVKKTVGVKLDCTLTVIIANQTVQDQTCKRSVKL 707
           +++ TS+ GRV+++ ++KK V VK++C++TV I +Q++QDQ C + VKL
Sbjct: 178 MNSYTSVGGRVKLLNMIKKYVVVKMNCSITVNITSQSIQDQKCTKKVKL 226


>ref|XP_002511928.1| conserved hypothetical protein [Ricinus communis]
           gi|223549108|gb|EEF50597.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score =  162 bits (410), Expect = 8e-38
 Identities = 87/224 (38%), Positives = 137/224 (61%)
 Frame = +3

Query: 36  MVEKEQENPLAPQSHRIAIANDTITPQSTDDIERKRVRKRFVQCCGCTSAXXXXXXXXXX 215
           MVE EQ  PLAP + R +  ++    ++T  +++ R R+R ++CCGC +A          
Sbjct: 1   MVEHEQVRPLAPSADRTSSDDE----EATIHLKKTR-RRRCIKCCGCITASLLVPAIVIV 55

Query: 216 XXXXXXXXXXDPKINLNYVTIRGLQGINPANLVPNTNLTIIADVSVKNPNIASFRFKNAT 395
                     DP I LN V I  ++ IN     P TN++++AD+SVKNPNI SF++ N T
Sbjct: 56  ILIFTVFRVKDPTIKLNNVIITHMELINNTIPKPGTNISLVADLSVKNPNIVSFKYDNTT 115

Query: 396 TEIYYEDVLIGVAQIPQGNAKAKKTIQLNVTLDFLLEKILRVPRLVGDLTAGSLPVSTKT 575
           + +YY  VL+G A+ P G++KA++T++LN T+D + +K++  P L  D   G L V + T
Sbjct: 116 SALYYHGVLVGEARGPPGHSKARRTMRLNATIDLVADKLISNPNLNTDAATGLLTVDSYT 175

Query: 576 SIRGRVEIIEIVKKTVGVKLDCTLTVIIANQTVQDQTCKRSVKL 707
            + G+V+I+ I+KK V +K++C+LTV I++Q +Q Q CK  V L
Sbjct: 176 KLPGKVKIL-IIKKHVTIKMNCSLTVNISSQAIQSQKCKNKVDL 218


>ref|XP_003548621.1| PREDICTED: uncharacterized protein LOC100799820 [Glycine max]
          Length = 219

 Score =  162 bits (409), Expect = 1e-37
 Identities = 82/224 (36%), Positives = 130/224 (58%)
 Frame = +3

Query: 36  MVEKEQENPLAPQSHRIAIANDTITPQSTDDIERKRVRKRFVQCCGCTSAXXXXXXXXXX 215
           M+E EQ  PLAP   R +   D  TP       +K +++     C C             
Sbjct: 1   MLETEQARPLAPSIERQSSDEDNTTPHPQTQGHKKLIKR-----CACPLISLLLIAIVII 55

Query: 216 XXXXXXXXXXDPKINLNYVTIRGLQGINPANLVPNTNLTIIADVSVKNPNIASFRFKNAT 395
                     DP I +N + I  LQ +N  +  P  N++++ADVSVKNPN+ASFR+ N T
Sbjct: 56  VLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTT 115

Query: 396 TEIYYEDVLIGVAQIPQGNAKAKKTIQLNVTLDFLLEKILRVPRLVGDLTAGSLPVSTKT 575
           T +YY  V++G A+ P G AKA++T+++NVT+D +  +++  P  V DL +G L +S+ +
Sbjct: 116 TSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSPDFVTDLGSGLLTMSSFS 175

Query: 576 SIRGRVEIIEIVKKTVGVKLDCTLTVIIANQTVQDQTCKRSVKL 707
            + G+V+I+ ++K+ V VK++CT T  I+ Q +++Q+CKR VKL
Sbjct: 176 RVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVKL 219


>gb|ACU19833.1| unknown [Glycine max]
          Length = 219

 Score =  160 bits (404), Expect = 4e-37
 Identities = 81/224 (36%), Positives = 129/224 (57%)
 Frame = +3

Query: 36  MVEKEQENPLAPQSHRIAIANDTITPQSTDDIERKRVRKRFVQCCGCTSAXXXXXXXXXX 215
           M+E EQ  PLAP   R +   D   P       +K +++     C C             
Sbjct: 1   MLETEQARPLAPSIERQSSDEDNTAPHPQTQGHKKLIKR-----CACPLISLLLIAIVII 55

Query: 216 XXXXXXXXXXDPKINLNYVTIRGLQGINPANLVPNTNLTIIADVSVKNPNIASFRFKNAT 395
                     DP I +N + I  LQ +N  +  P  N++++ADVSVKNPN+ASFR+ N T
Sbjct: 56  VLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTT 115

Query: 396 TEIYYEDVLIGVAQIPQGNAKAKKTIQLNVTLDFLLEKILRVPRLVGDLTAGSLPVSTKT 575
           T +YY  V++G A+ P G AKA++T+++NVT+D +  +++  P  V DL +G L +S+ +
Sbjct: 116 TSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVIAARVISSPDFVTDLGSGLLTMSSFS 175

Query: 576 SIRGRVEIIEIVKKTVGVKLDCTLTVIIANQTVQDQTCKRSVKL 707
            + G+V+I+ ++K+ V VK++CT T  I+ Q +++Q+CKR VKL
Sbjct: 176 RVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVKL 219


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