BLASTX nr result

ID: Bupleurum21_contig00024303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024303
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    57   1e-06
ref|XP_002276181.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    56   3e-06
emb|CAN73757.1| hypothetical protein VITISV_026326 [Vitis vinifera]    56   3e-06

>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +1

Query: 103 QFAADVETLLGNGYDEESCGIAGLGLVECKQENVIDNTFEGNGVKLEDE 249
           +FAADVE+LLG G D ES G+ GLGL++CK++  ++ +     VKLE+E
Sbjct: 200 EFAADVESLLGKGLDNESFGMEGLGLIDCKEKESVEYSLHSGRVKLEEE 248


>ref|XP_002276181.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
          Length = 410

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 46/74 (62%)
 Frame = +1

Query: 28  SNNGNDEASNFDNXXXXXXXXXXXXQFAADVETLLGNGYDEESCGIAGLGLVECKQENVI 207
           S+ G++E  + D+            +FAADVE+ LG G DE+SCGI G+G+++C+Q + +
Sbjct: 164 SDYGHEEIGDLDSLTGFLPSEMDLAEFAADVESYLGAGLDEDSCGIKGIGVLDCEQGD-M 222

Query: 208 DNTFEGNGVKLEDE 249
           D  F    VK+++E
Sbjct: 223 DACFGDQKVKVKEE 236


>emb|CAN73757.1| hypothetical protein VITISV_026326 [Vitis vinifera]
          Length = 475

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 46/74 (62%)
 Frame = +1

Query: 28  SNNGNDEASNFDNXXXXXXXXXXXXQFAADVETLLGNGYDEESCGIAGLGLVECKQENVI 207
           S+ G++E  + D+            +FAADVE+ LG G DE+SCGI G+G+++C+Q + +
Sbjct: 229 SDYGHEEIGDLDSLTGFLPSEMDLAEFAADVESYLGAGLDEDSCGIKGIGVLDCEQGD-M 287

Query: 208 DNTFEGNGVKLEDE 249
           D  F    VK+++E
Sbjct: 288 DACFGDQKVKVKEE 301


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