BLASTX nr result

ID: Bupleurum21_contig00024298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024298
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299722.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002304212.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002279072.1| PREDICTED: peroxisome biogenesis protein 2 [...   445   e-123
ref|XP_004169300.1| PREDICTED: peroxisome biogenesis protein 2-l...   444   e-122
ref|XP_003626977.1| Peroxisome assembly protein [Medicago trunca...   435   e-120

>ref|XP_002299722.1| predicted protein [Populus trichocarpa] gi|222846980|gb|EEE84527.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  449 bits (1156), Expect = e-124
 Identities = 224/276 (81%), Positives = 240/276 (86%), Gaps = 1/276 (0%)
 Frame = +3

Query: 42  SSSGNNQSPPAEDEWVNTCHRLLPQWKQHSSLSHQSSIPITISRVNQVDAGRLDIEMSAM 221
           SSS  +Q PP EDEW+ T  +LLP+W Q  +LSHQS IPI+ISRVNQ DA RLDIEMSAM
Sbjct: 2   SSSNLSQQPPPEDEWIRTYLKLLPEW-QPPALSHQSMIPISISRVNQFDAARLDIEMSAM 60

Query: 222 LKEQLLKVFSLMKPGMLFHYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERALE 401
           LKEQL+KVFSLMKPGMLF YEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERA++
Sbjct: 61  LKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAMD 120

Query: 402 MRGKFRTGLEGPGLTFAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRTLARRAWFL 581
             GK RTGLEGPGLT AQKIWYC+ATVGGQY WARLQSFSAFRRWGDSEQR LARRAW L
Sbjct: 121 SIGKVRTGLEGPGLTIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWIL 180

Query: 582 IQRIEGFYKAASFSNLLVFLYTGRYRNLIERALQARLVYGSPHMNRAVSFEYMNRQLVWN 761
           IQRIEG YKAASF NLL+FLYTGR+RNLIER LQARLVYGSP+MNRAVSFEYMNRQLVWN
Sbjct: 181 IQRIEGLYKAASFGNLLIFLYTGRFRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVWN 240

Query: 762 EFSEMXXXXXXXXNSSSVKNFL-PFAKDKSSTSAED 866
           EFSEM        NSSS+K FL PF+KDKSS+S  D
Sbjct: 241 EFSEMLLLLLPLLNSSSIKKFLSPFSKDKSSSSKVD 276


>ref|XP_002304212.1| predicted protein [Populus trichocarpa] gi|222841644|gb|EEE79191.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  449 bits (1156), Expect = e-124
 Identities = 224/272 (82%), Positives = 239/272 (87%), Gaps = 1/272 (0%)
 Frame = +3

Query: 54  NNQSPPAEDEWVNTCHRLLPQWKQHSSLSHQSSIPITISRVNQVDAGRLDIEMSAMLKEQ 233
           N + PP EDEWV+T  +LLPQWK   +LSHQS IPI+ISRVNQ DA RLDIEMSAMLKEQ
Sbjct: 5   NLRQPPPEDEWVHTYLKLLPQWKP-LALSHQSMIPISISRVNQFDAARLDIEMSAMLKEQ 63

Query: 234 LLKVFSLMKPGMLFHYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERALEMRGK 413
           L+KVFSLMKPGMLF YEPELDAFLEFLIWRFSIWVDKPTPGNALM+LRYRDERA+E RGK
Sbjct: 64  LVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMDLRYRDERAMESRGK 123

Query: 414 FRTGLEGPGLTFAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRTLARRAWFLIQRI 593
            RTGLEGPGLT AQKIWYC+ATVGGQY WARLQSFSAFRRWGDSEQR LARRAW LIQR+
Sbjct: 124 VRTGLEGPGLTIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWILIQRV 183

Query: 594 EGFYKAASFSNLLVFLYTGRYRNLIERALQARLVYGSPHMNRAVSFEYMNRQLVWNEFSE 773
           EG YKAASF NLL+FLYTGR+RNLIER LQARLVYGSP+MNRAVSFEYMNRQLVWNEFSE
Sbjct: 184 EGLYKAASFGNLLIFLYTGRFRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVWNEFSE 243

Query: 774 MXXXXXXXXNSSSVKNFL-PFAKDKSSTSAED 866
           M        NSSSVK FL PF+KDKSS+S  D
Sbjct: 244 MLLLLLPLLNSSSVKKFLGPFSKDKSSSSKVD 275


>ref|XP_002279072.1| PREDICTED: peroxisome biogenesis protein 2 [Vitis vinifera]
           gi|297743241|emb|CBI36108.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  445 bits (1145), Expect = e-123
 Identities = 225/284 (79%), Positives = 245/284 (86%), Gaps = 1/284 (0%)
 Frame = +3

Query: 18  ETQTLAHPSSSGNNQSPPAEDEWVNTCHRLLPQWKQHSSLSHQSSIPITISRVNQVDAGR 197
           E QTL    SS    +   ED WV+T  RL PQW Q  SLS QS+IP++ISRVNQVDA R
Sbjct: 2   EKQTL---DSSSTASAVAPEDAWVHTYQRLQPQW-QSFSLSQQSTIPVSISRVNQVDAAR 57

Query: 198 LDIEMSAMLKEQLLKVFSLMKPGMLFHYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLR 377
           LDIE+SAMLKEQL+KVFSLMKPGMLF YEPELDAFLEFLIWRFSIWVDKPTPGN LMNLR
Sbjct: 58  LDIEISAMLKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLR 117

Query: 378 YRDERALEMRGKFRTGLEGPGLTFAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRT 557
           YRDER +E+RGK RTGLEGPGLT AQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQR+
Sbjct: 118 YRDERTMELRGKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRS 177

Query: 558 LARRAWFLIQRIEGFYKAASFSNLLVFLYTGRYRNLIERALQARLVYGSPHMNRAVSFEY 737
           +ARRAW +IQRIEG YKAASFSNLL+FL+TGRYRNLIERALQARLVYGSP+MNRAVSFEY
Sbjct: 178 VARRAWIMIQRIEGLYKAASFSNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEY 237

Query: 738 MNRQLVWNEFSEMXXXXXXXXNSSSVKNFL-PFAKDKSSTSAED 866
           MNRQLVWNEFSEM        NSSS++NFL PF+K+KSS+S  D
Sbjct: 238 MNRQLVWNEFSEMLLLLLPLLNSSSIRNFLRPFSKNKSSSSEGD 281


>ref|XP_004169300.1| PREDICTED: peroxisome biogenesis protein 2-like [Cucumis sativus]
          Length = 360

 Score =  444 bits (1142), Expect = e-122
 Identities = 220/285 (77%), Positives = 243/285 (85%), Gaps = 1/285 (0%)
 Frame = +3

Query: 15  SETQTLAHPSSSGNNQSPPAEDEWVNTCHRLLPQWKQHSSLSHQSSIPITISRVNQVDAG 194
           S + + + PS+S +N  PP ED W     RLLP+WK  S  SH S IPI+IS+VNQVDA 
Sbjct: 11  STSSSASPPSTSNSNLPPPPEDAWTRASQRLLPRWKSLSH-SHLSPIPISISKVNQVDAA 69

Query: 195 RLDIEMSAMLKEQLLKVFSLMKPGMLFHYEPELDAFLEFLIWRFSIWVDKPTPGNALMNL 374
           RLDIEMSAMLKEQL+KVF+LMKPGMLF YE ELDAFLEFLIWRFSIWVDKPTPG ALMNL
Sbjct: 70  RLDIEMSAMLKEQLVKVFALMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNL 129

Query: 375 RYRDERALEMRGKFRTGLEGPGLTFAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQR 554
           RYRDER++E+ GK RTGLEGPGLT AQKIWYCVA+VGGQYIW RLQSFSAFRRWGDSEQR
Sbjct: 130 RYRDERSMEIPGKVRTGLEGPGLTVAQKIWYCVASVGGQYIWTRLQSFSAFRRWGDSEQR 189

Query: 555 TLARRAWFLIQRIEGFYKAASFSNLLVFLYTGRYRNLIERALQARLVYGSPHMNRAVSFE 734
           +LARRAW LIQRIEG YKAA+F NLL+FLYTGRYRNL+ER L+ARLVYGSPHMNRAVSFE
Sbjct: 190 SLARRAWLLIQRIEGIYKAAAFGNLLIFLYTGRYRNLVERVLRARLVYGSPHMNRAVSFE 249

Query: 735 YMNRQLVWNEFSEMXXXXXXXXNSSSVKNFL-PFAKDKSSTSAED 866
           YMNRQLVWNEFSEM        NSSSV+NFL PF+K+KS+ SAED
Sbjct: 250 YMNRQLVWNEFSEMLLLLLPLLNSSSVRNFLRPFSKEKSTNSAED 294


>ref|XP_003626977.1| Peroxisome assembly protein [Medicago truncatula]
           gi|355520999|gb|AET01453.1| Peroxisome assembly protein
           [Medicago truncatula]
          Length = 438

 Score =  435 bits (1118), Expect = e-120
 Identities = 219/277 (79%), Positives = 236/277 (85%), Gaps = 1/277 (0%)
 Frame = +3

Query: 39  PSSSGNNQSPPAEDEWVNTCHRLLPQWKQHSSLSHQSSIPITISRVNQVDAGRLDIEMSA 218
           P SS    S P +D W  T H+LLP+W    SLSHQS+IPI+ISRVNQVDA RLDIEMSA
Sbjct: 105 PMSSTTLPSVPPQDAWTLTSHKLLPRW---ISLSHQSTIPISISRVNQVDAARLDIEMSA 161

Query: 219 MLKEQLLKVFSLMKPGMLFHYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAL 398
           MLKEQL+KVF+LMKPGMLF YE ELDAFLEFLIWRFSIWVDKPTPG ALMNLRYRDERA+
Sbjct: 162 MLKEQLVKVFTLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAV 221

Query: 399 EMRGKFRTGLEGPGLTFAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRTLARRAWF 578
           E R K RTGLEGPGLT AQK+WYC+ATVGGQYIWARLQSFSAFRRWGD+EQR LARR W 
Sbjct: 222 ESRDKVRTGLEGPGLTVAQKLWYCIATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWI 281

Query: 579 LIQRIEGFYKAASFSNLLVFLYTGRYRNLIERALQARLVYGSPHMNRAVSFEYMNRQLVW 758
           LIQRIEG Y+AASF NLL+FL TGRYRNLIER L+ARLVYGSP+MNRAVSFEYMNRQLVW
Sbjct: 282 LIQRIEGIYRAASFGNLLIFLCTGRYRNLIERVLRARLVYGSPNMNRAVSFEYMNRQLVW 341

Query: 759 NEFSEMXXXXXXXXNSSSVKNFL-PFAKDKSSTSAED 866
           NEFSEM        NSSSVKN L PF+KDKSS+S ED
Sbjct: 342 NEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSSSGED 378


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