BLASTX nr result

ID: Bupleurum21_contig00024292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024292
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   124   1e-26
ref|NP_680211.1| Cox19-like CHCH family protein [Arabidopsis tha...   123   1e-26
ref|XP_002874127.1| hypothetical protein ARALYDRAFT_489201 [Arab...   123   2e-26
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...   120   9e-26
ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   120   1e-25

>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
 Frame = -3

Query: 296 MGQVQSQDGGDAITEAP---SVKPSDQSSPPSMESLLAEAEAFGSEDENASLDEKAKKAL 126
           MGQ +S        + P   +   S  S PPSMESL+AEAEA+G+E  N SLD KA +AL
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSGPPSMESLIAEAEAYGNET-NESLDAKANRAL 59

Query: 125 DCPCLADLKKGPCGSQFTGAFLCFLKSTAEEKGSDCVHPFV 3
           +CPC+ADL+KGPCG QF+ AFLCF KSTAEEKGSDCVHPFV
Sbjct: 60  ECPCIADLRKGPCGIQFSDAFLCFFKSTAEEKGSDCVHPFV 100


>ref|NP_680211.1| Cox19-like CHCH family protein [Arabidopsis thaliana]
           gi|26450246|dbj|BAC42240.1| unknown protein [Arabidopsis
           thaliana] gi|28827550|gb|AAO50619.1| unknown protein
           [Arabidopsis thaliana] gi|332005776|gb|AED93159.1|
           Cox19-like CHCH family protein [Arabidopsis thaliana]
          Length = 162

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/107 (58%), Positives = 76/107 (71%), Gaps = 9/107 (8%)
 Frame = -3

Query: 296 MGQVQSQDGGDAITEAPSVKPSDQSSP--------PSMESLLAEAEAFGSED-ENASLDE 144
           MGQ QS +     T   +  P   +SP        PSM+SLLAEA A+G +D EN SL+ 
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSANSPRDSEDTSSPSMDSLLAEAAAYGEDDNENESLEA 60

Query: 143 KAKKALDCPCLADLKKGPCGSQFTGAFLCFLKSTAEEKGSDCVHPFV 3
           KA++ALDCPC+ADL+ G CGSQF+ AFLCFLKSTAEEKGSDCV+PFV
Sbjct: 61  KAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFV 107


>ref|XP_002874127.1| hypothetical protein ARALYDRAFT_489201 [Arabidopsis lyrata subsp.
           lyrata] gi|297319964|gb|EFH50386.1| hypothetical protein
           ARALYDRAFT_489201 [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/84 (70%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
 Frame = -3

Query: 251 APSVKPSDQSSPPSMESLLAEAEAFGSED-ENASLDEKAKKALDCPCLADLKKGPCGSQF 75
           A S + S+ +S PSM+SLLAEA A+G +D EN SL+ KA++ALDCPC+ADL+ G CGSQF
Sbjct: 34  ANSPRDSEDTSSPSMDSLLAEAAAYGEDDNENESLEAKAQRALDCPCIADLRNGSCGSQF 93

Query: 74  TGAFLCFLKSTAEEKGSDCVHPFV 3
           + AFLCFLKSTAEEKGSDCVHPFV
Sbjct: 94  SEAFLCFLKSTAEEKGSDCVHPFV 117


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/101 (61%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
 Frame = -3

Query: 296 MGQVQSQDGGDAITEAP---SVKPSDQSSPPSMESLLAEAEAFGSEDENASLDEKAKKAL 126
           MGQ +S        + P   +   S  S PPSMESL+AEAEA+G+E  N SLD KA +AL
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPVSGPPSMESLIAEAEAYGNET-NESLDAKANRAL 59

Query: 125 DCPCLADLKKGPCGSQFTGAFLCFLKSTAEEKGSDCVHPFV 3
           +CPC+ADL+KG CG QF+ AFLCF KSTAEEKGSDCVHPFV
Sbjct: 60  ECPCIADLRKGSCGIQFSDAFLCFFKSTAEEKGSDCVHPFV 100


>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  120 bits (301), Expect = 1e-25
 Identities = 65/106 (61%), Positives = 76/106 (71%), Gaps = 8/106 (7%)
 Frame = -3

Query: 296 MGQVQSQDGGDAITEAPSVKPSDQ--------SSPPSMESLLAEAEAFGSEDENASLDEK 141
           MGQ QS+           V PSD         SS PSMESLLAEA A+G+ DEN SL+ K
Sbjct: 1   MGQAQSE-----------VAPSDTADQMEPHFSSSPSMESLLAEAVAYGN-DENESLEAK 48

Query: 140 AKKALDCPCLADLKKGPCGSQFTGAFLCFLKSTAEEKGSDCVHPFV 3
           A+KAL+CPC+ADL+ GPCG QF+ +FLCFLKST+EEKGSDCVHPFV
Sbjct: 49  AQKALECPCIADLRNGPCGVQFSESFLCFLKSTSEEKGSDCVHPFV 94


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