BLASTX nr result

ID: Bupleurum21_contig00024291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024291
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...    80   2e-13
ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...    78   6e-13
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...    70   2e-10
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...    70   2e-10
ref|XP_003548365.1| PREDICTED: mitochondrial intermembrane space...    68   9e-10

>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = -2

Query: 283 HPFVALQNCIKANPGAFSKDVLEDEEVAKEEKPSQQYKIIPPDWS 149
           HPFVALQNCIKANP AFSKD+LE+ E  KEE+P+Q+YKIIPP WS
Sbjct: 91  HPFVALQNCIKANPNAFSKDILEEAEEKKEEEPAQEYKIIPPIWS 135


>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/46 (76%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
 Frame = -2

Query: 283 HPFVALQNCIKANPGAFSKDVL-EDEEVAKEEKPSQQYKIIPPDWS 149
           HPFVALQNCIKANP AFSKD+L +D+EV KEE+P+Q+YKIIPP W+
Sbjct: 87  HPFVALQNCIKANPNAFSKDILDDDDEVKKEEEPTQEYKIIPPIWA 132


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 8/53 (15%)
 Frame = -2

Query: 283 HPFVALQNCIKANPGAFSKDVLEDEEVAKE--------EKPSQQYKIIPPDWS 149
           HPFVALQ+CIKANP AFSKDVL+++E  KE        E+P+Q Y++IPP WS
Sbjct: 97  HPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQDYRVIPPSWS 149


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 8/53 (15%)
 Frame = -2

Query: 283 HPFVALQNCIKANPGAFSKDVLEDEEVAKE--------EKPSQQYKIIPPDWS 149
           HPFVALQ+CIKANP AFSKDVL+++E  KE        E+P+Q Y+++PP WS
Sbjct: 97  HPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQDYRVVPPSWS 149


>ref|XP_003548365.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Glycine max]
          Length = 136

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/46 (67%), Positives = 39/46 (84%), Gaps = 1/46 (2%)
 Frame = -2

Query: 283 HPFVALQNCIKANPGAFSKDVL-EDEEVAKEEKPSQQYKIIPPDWS 149
           HPFVALQ+CIKANP AFSKD+L + E+ +KE +P Q+YKI+PP WS
Sbjct: 90  HPFVALQSCIKANPDAFSKDILGKAEDESKELEPVQEYKILPPKWS 135


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