BLASTX nr result

ID: Bupleurum21_contig00024290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024290
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783...   106   2e-21
ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   105   3e-21
emb|CBI34155.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   105   3e-21
ref|XP_002531290.1| protein with unknown function [Ricinus commu...   100   2e-19

>ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783484 [Glycine max]
          Length = 1718

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = -3

Query: 254 ELCVVLVMDTVIRQVQILRQGRWRDAIRFEXXXXXXXXXXXXXNTSQPSQDGENDSSVSR 75
           ELCV LVMDTVIRQVQ+LRQGRW+DAIRFE              +S  + DGE+DSS  R
Sbjct: 256 ELCVALVMDTVIRQVQVLRQGRWKDAIRFELISEGHGASS----SSAQNPDGESDSSAMR 311

Query: 74  TPGMKILYWLDFDKSSGASDVGSC 3
           TPG+KI+YWLDFDK++GAS+ G+C
Sbjct: 312 TPGLKIVYWLDFDKNAGASESGTC 335


>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/84 (61%), Positives = 64/84 (76%)
 Frame = -3

Query: 254 ELCVVLVMDTVIRQVQILRQGRWRDAIRFEXXXXXXXXXXXXXNTSQPSQDGENDSSVSR 75
           ELCV LVMDTVIRQVQ+LRQGRW+DAIRFE             ++S  + DGE+DSS  R
Sbjct: 256 ELCVALVMDTVIRQVQVLRQGRWKDAIRFE----LISEGHGASSSSALNPDGESDSSAMR 311

Query: 74  TPGMKILYWLDFDKSSGASDVGSC 3
           TPG+KI+YWLDFDK++GAS+ G+C
Sbjct: 312 TPGLKIVYWLDFDKNAGASESGTC 335


>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = -3

Query: 254 ELCVVLVMDTVIRQVQILRQGRWRDAIRFEXXXXXXXXXXXXXNTSQPSQDGENDSSVSR 75
           ELCV L+MDTVIRQV+ LRQGRW+DAIRFE              + Q +QDGE DS+  R
Sbjct: 255 ELCVALIMDTVIRQVKALRQGRWKDAIRFELISDGNIAQGGSAGSMQMNQDGEADSAGLR 314

Query: 74  TPGMKILYWLDFDKSSGASDVGSC 3
           TPG+KI+YWLD DK+SG SD GSC
Sbjct: 315 TPGLKIVYWLDLDKNSGTSDSGSC 338


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/84 (60%), Positives = 60/84 (71%)
 Frame = -3

Query: 254 ELCVVLVMDTVIRQVQILRQGRWRDAIRFEXXXXXXXXXXXXXNTSQPSQDGENDSSVSR 75
           ELCV L+MDTVIRQV+ LRQGRW+DAIRFE              + Q +QDGE DS+  R
Sbjct: 255 ELCVALIMDTVIRQVKALRQGRWKDAIRFELISDGNIAQGGSAGSMQMNQDGEADSAGLR 314

Query: 74  TPGMKILYWLDFDKSSGASDVGSC 3
           TPG+KI+YWLD DK+SG SD GSC
Sbjct: 315 TPGLKIVYWLDLDKNSGTSDSGSC 338


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
           gi|223529123|gb|EEF31103.1| protein with unknown
           function [Ricinus communis]
          Length = 1746

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/84 (59%), Positives = 59/84 (70%)
 Frame = -3

Query: 254 ELCVVLVMDTVIRQVQILRQGRWRDAIRFEXXXXXXXXXXXXXNTSQPSQDGENDSSVSR 75
           ELC+ L+MDTVIRQVQ LRQGRW+DAIRFE              ++  +QDGE DS   R
Sbjct: 255 ELCISLIMDTVIRQVQALRQGRWKDAIRFELISDGSTG------STLLNQDGETDSVGLR 308

Query: 74  TPGMKILYWLDFDKSSGASDVGSC 3
           TPG+KI+YWLD DK+SG SD GSC
Sbjct: 309 TPGLKIMYWLDLDKNSGTSDSGSC 332


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