BLASTX nr result

ID: Bupleurum21_contig00024267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024267
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]   122   4e-26
ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   120   1e-25

>ref|XP_002336150.1| predicted protein [Populus trichocarpa] gi|222874330|gb|EEF11461.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  124 bits (311), Expect = 8e-27
 Identities = 53/112 (47%), Positives = 73/112 (65%)
 Frame = -2

Query: 341 DKEVVKLSDFFCEICMENREPWQMFINSMCSHSFCYDCTSKHIEAKVQDGLKIVTCPAVK 162
           D E  + S  FCEIC E +E  QMF    C HSFC DC S+H+  KVQD ++IVTCP + 
Sbjct: 91  DLEAGESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLS 150

Query: 161 CAATLDSSACRWMISEDILVCWDESLCNSLIQESQKLYCPFKDCSIMLVNDS 6
           C A L+   CR +++  ++  W+ +LC  +I  SQ+ YCPFKDCS +LV+D+
Sbjct: 151 CRAVLEMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLVDDN 202


>ref|XP_002299166.1| predicted protein [Populus trichocarpa] gi|222846424|gb|EEE83971.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  124 bits (311), Expect = 8e-27
 Identities = 53/112 (47%), Positives = 73/112 (65%)
 Frame = -2

Query: 341 DKEVVKLSDFFCEICMENREPWQMFINSMCSHSFCYDCTSKHIEAKVQDGLKIVTCPAVK 162
           D E  + S  FCEIC E +E  QMF    C HSFC DC S+H+  KVQD ++IVTCP + 
Sbjct: 91  DLEAGESSLSFCEICAERKENDQMFKTESCVHSFCNDCISRHVATKVQDNIRIVTCPGLS 150

Query: 161 CAATLDSSACRWMISEDILVCWDESLCNSLIQESQKLYCPFKDCSIMLVNDS 6
           C A L+   CR +++  ++  W+ +LC  +I  SQ+ YCPFKDCS +LV+D+
Sbjct: 151 CRAVLEMDTCRPVLTRGVIDRWENALCEEMINASQRFYCPFKDCSALLVDDN 202


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/128 (42%), Positives = 81/128 (63%)
 Frame = -2

Query: 386 STVQSSTLETKFVKADKEVVKLSDFFCEICMENREPWQMFINSMCSHSFCYDCTSKHIEA 207
           S+  SS  +     A  E  + S+ FCEIC E RE  +MF +  C H+FC  C SKH+  
Sbjct: 36  SSGSSSAADAAVDMAVVEEGQTSENFCEICAEMREVDEMFRSGKCCHTFCSYCISKHVAV 95

Query: 206 KVQDGLKIVTCPAVKCAATLDSSACRWMISEDILVCWDESLCNSLIQESQKLYCPFKDCS 27
           K+Q+ +++VTCPA+ C   L+   CR +++ +++  W+E  C S+I  SQ+ YCPF+DCS
Sbjct: 96  KIQESVRMVTCPALXCEGVLEVDDCRGIVAREVMEKWEEVSCESIIAASQRFYCPFRDCS 155

Query: 26  IMLVNDSG 3
            MLV+D+G
Sbjct: 156 AMLVDDNG 163



 Score =  108 bits (271), Expect = 3e-22
 Identities = 44/101 (43%), Positives = 63/101 (62%)
 Frame = -2

Query: 308 CEICMENREPWQMFINSMCSHSFCYDCTSKHIEAKVQDGLKIVTCPAVKCAATLDSSACR 129
           CEIC E +E   MF N  C HS C DC SKH+E K++    ++ CP + C   LD   CR
Sbjct: 587 CEICCERKESTGMFRNEGCRHSVCTDCISKHVEVKIESNSGMILCPGMDCRGVLDPERCR 646

Query: 128 WMISEDILVCWDESLCNSLIQESQKLYCPFKDCSIMLVNDS 6
             + + ++  W+ ++  +LI +S+K YCPFKDCS ML+ND+
Sbjct: 647 GFLPKTVVERWEXAIIETLILDSEKFYCPFKDCSAMLLNDN 687



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = -2

Query: 320 SDFFCEICMENREPWQMFINSMCSHSFCYDCTSKHIEAKV---QDGLKIVTCPAVKCAAT 150
           S   C +CM++ E  + + NS CSHS+C  C S ++  ++   +    +  CPA KC A 
Sbjct: 446 SKILCLLCMKSMESEETYRNSSCSHSYCIKCISMYVPLRIVLNKGTSSMFRCPAYKCKAI 505

Query: 149 LDSSACRWMISEDILVCWDESLCNSLIQESQKLYCPFKDCS 27
           L+ S    ++   +   W+ +   +L  ES+K   PF+DC+
Sbjct: 506 LELSP--GIVPGPVFQRWNAAKYEALHIESKKNQSPFEDCN 544


>ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|222841400|gb|EEE78947.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  121 bits (303), Expect = 7e-26
 Identities = 49/102 (48%), Positives = 71/102 (69%)
 Frame = -2

Query: 311 FCEICMENREPWQMFINSMCSHSFCYDCTSKHIEAKVQDGLKIVTCPAVKCAATLDSSAC 132
           FC+IC E ++  QMF    C HSFC DC S+++ AKVQDG +IVTCP + C A LD   C
Sbjct: 103 FCDICAERKQNDQMFKTESCVHSFCNDCISRYVAAKVQDGTRIVTCPGLNCRAVLDLVTC 162

Query: 131 RWMISEDILVCWDESLCNSLIQESQKLYCPFKDCSIMLVNDS 6
           R +++  ++  W+++LC  +I  SQ+ YCPFKDCS +L++D+
Sbjct: 163 RPILTSVVIDLWEDALCEEVINVSQRFYCPFKDCSALLIDDN 204


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  120 bits (300), Expect = 1e-25
 Identities = 49/110 (44%), Positives = 69/110 (62%)
 Frame = -2

Query: 335 EVVKLSDFFCEICMENREPWQMFINSMCSHSFCYDCTSKHIEAKVQDGLKIVTCPAVKCA 156
           E  + S  FCEIC+E +E  QMF    C HSFC DC  K++  K+Q+   IVTCP + C 
Sbjct: 96  ETGQSSQIFCEICVEKKETDQMFATDSCIHSFCLDCVGKYVGTKIQESQTIVTCPGMNCR 155

Query: 155 ATLDSSACRWMISEDILVCWDESLCNSLIQESQKLYCPFKDCSIMLVNDS 6
           A L+   CR  +++ ++  W+E+LC  +I   Q  YCPF+DCS +LVND+
Sbjct: 156 AVLELDICRTKLAKGVIDSWEEALCKEMISTLQSFYCPFRDCSALLVNDN 205


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