BLASTX nr result

ID: Bupleurum21_contig00024261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024261
         (1225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27590.3| unnamed protein product [Vitis vinifera]              523   e-146
ref|XP_002264918.1| PREDICTED: U-box domain-containing protein 6...   523   e-146
emb|CAN79836.1| hypothetical protein VITISV_036163 [Vitis vinifera]   523   e-146
ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus ...   514   e-143
ref|XP_002314542.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139

>emb|CBI27590.3| unnamed protein product [Vitis vinifera]
          Length = 706

 Score =  523 bits (1348), Expect = e-146
 Identities = 265/390 (67%), Positives = 305/390 (78%)
 Frame = +2

Query: 2    SIGKPKLHGGMCTTLSAIYRRVLRIFPDLEAARPRSTSGIQALCSLHIALEKTKNILQHC 181
            ++   KLHGGMC  LS IY ++L IFP LEAARPRS SGIQALCSLHIALEK KNILQHC
Sbjct: 12   AVSDAKLHGGMCRMLSTIYCKILEIFPVLEAARPRSKSGIQALCSLHIALEKAKNILQHC 71

Query: 182  ADCSKLYLAITGDSVVLKIERARSSLIDSLRRLEEIVPQDIGSQISKIVGDFEGIQFSID 361
            ++CSKLYLAITGDSV LK E+AR +L DSLRR+E+IVPQ IG QIS+IV + EG  F++D
Sbjct: 72   SECSKLYLAITGDSVALKFEKARCALADSLRRVEDIVPQTIGVQISEIVSELEGTAFALD 131

Query: 362  PLEKQVGDDLIALLQLGKQFSRHYGDMNEIQLFNQAASRLGITSTGXXXXXXXXXXXXXX 541
            PLEKQVGDD+IALLQ G++F+    D NE++ F+QAASRLGITS+               
Sbjct: 132  PLEKQVGDDIIALLQQGRKFNNS-NDNNELESFHQAASRLGITSSRAALTERRALKKLIE 190

Query: 542  RAKIEDDKRKESIVAYLSHHMRRYSKTFRTDVSDDNNSQGSTPCSPTVQGSSEGYGALDV 721
            RA+IE+DKRKESIVAYL H MR+YSK FR+++SDDN+SQGS PCSPTV GS E      V
Sbjct: 191  RARIEEDKRKESIVAYLLHLMRKYSKLFRSELSDDNDSQGSAPCSPTVMGSLEDGVGPAV 250

Query: 722  NGCTTDQKLSKLSSFNFKPNLRRLGHTTVPPEELRCPISLQLMYDPVIIASGQTYERICI 901
             G   +++LSKL SFNFKPN RR G   +P EELRCPISLQLMYDPVII+SGQTYERICI
Sbjct: 251  YGHAFERQLSKLGSFNFKPNNRRSGQMPLPQEELRCPISLQLMYDPVIISSGQTYERICI 310

Query: 902  EKWFRDGHNTCPKTQQELSHLCLIPNYCVKGLVTSCREQNGFAVPDGPPESLDLNYWRLA 1081
            EKWF DGHNTCPKTQQ+LSHLCL PNYCVKGL+ S  EQNG  VPDGPPESLDLNYWRLA
Sbjct: 311  EKWFSDGHNTCPKTQQQLSHLCLTPNYCVKGLIASWCEQNGVPVPDGPPESLDLNYWRLA 370

Query: 1082 LSEGEYNDAKLMDGTGSFKLNGKNVAPTEK 1171
            LSE E  ++K MD  GS K+ G  V P E+
Sbjct: 371  LSECESTNSKSMDSIGSCKMKGVKVVPLEE 400


>ref|XP_002264918.1| PREDICTED: U-box domain-containing protein 6-like [Vitis vinifera]
          Length = 783

 Score =  523 bits (1348), Expect = e-146
 Identities = 265/390 (67%), Positives = 305/390 (78%)
 Frame = +2

Query: 2    SIGKPKLHGGMCTTLSAIYRRVLRIFPDLEAARPRSTSGIQALCSLHIALEKTKNILQHC 181
            ++   KLHGGMC  LS IY ++L IFP LEAARPRS SGIQALCSLHIALEK KNILQHC
Sbjct: 12   AVSDAKLHGGMCRMLSTIYCKILEIFPVLEAARPRSKSGIQALCSLHIALEKAKNILQHC 71

Query: 182  ADCSKLYLAITGDSVVLKIERARSSLIDSLRRLEEIVPQDIGSQISKIVGDFEGIQFSID 361
            ++CSKLYLAITGDSV LK E+AR +L DSLRR+E+IVPQ IG QIS+IV + EG  F++D
Sbjct: 72   SECSKLYLAITGDSVALKFEKARCALADSLRRVEDIVPQTIGVQISEIVSELEGTAFALD 131

Query: 362  PLEKQVGDDLIALLQLGKQFSRHYGDMNEIQLFNQAASRLGITSTGXXXXXXXXXXXXXX 541
            PLEKQVGDD+IALLQ G++F+    D NE++ F+QAASRLGITS+               
Sbjct: 132  PLEKQVGDDIIALLQQGRKFNNS-NDNNELESFHQAASRLGITSSRAALTERRALKKLIE 190

Query: 542  RAKIEDDKRKESIVAYLSHHMRRYSKTFRTDVSDDNNSQGSTPCSPTVQGSSEGYGALDV 721
            RA+IE+DKRKESIVAYL H MR+YSK FR+++SDDN+SQGS PCSPTV GS E      V
Sbjct: 191  RARIEEDKRKESIVAYLLHLMRKYSKLFRSELSDDNDSQGSAPCSPTVMGSLEDGVGPAV 250

Query: 722  NGCTTDQKLSKLSSFNFKPNLRRLGHTTVPPEELRCPISLQLMYDPVIIASGQTYERICI 901
             G   +++LSKL SFNFKPN RR G   +P EELRCPISLQLMYDPVII+SGQTYERICI
Sbjct: 251  YGHAFERQLSKLGSFNFKPNNRRSGQMPLPQEELRCPISLQLMYDPVIISSGQTYERICI 310

Query: 902  EKWFRDGHNTCPKTQQELSHLCLIPNYCVKGLVTSCREQNGFAVPDGPPESLDLNYWRLA 1081
            EKWF DGHNTCPKTQQ+LSHLCL PNYCVKGL+ S  EQNG  VPDGPPESLDLNYWRLA
Sbjct: 311  EKWFSDGHNTCPKTQQQLSHLCLTPNYCVKGLIASWCEQNGVPVPDGPPESLDLNYWRLA 370

Query: 1082 LSEGEYNDAKLMDGTGSFKLNGKNVAPTEK 1171
            LSE E  ++K MD  GS K+ G  V P E+
Sbjct: 371  LSECESTNSKSMDSIGSCKMKGVKVVPLEE 400


>emb|CAN79836.1| hypothetical protein VITISV_036163 [Vitis vinifera]
          Length = 783

 Score =  523 bits (1348), Expect = e-146
 Identities = 265/390 (67%), Positives = 305/390 (78%)
 Frame = +2

Query: 2    SIGKPKLHGGMCTTLSAIYRRVLRIFPDLEAARPRSTSGIQALCSLHIALEKTKNILQHC 181
            ++   KLHGGMC  LS IY ++L IFP LEAARPRS SGIQALCSLHIALEK KNILQHC
Sbjct: 12   AVSDAKLHGGMCRXLSTIYCKILEIFPVLEAARPRSKSGIQALCSLHIALEKAKNILQHC 71

Query: 182  ADCSKLYLAITGDSVVLKIERARSSLIDSLRRLEEIVPQDIGSQISKIVGDFEGIQFSID 361
            ++CSKLYLAITGDSV LK E+AR +L DSLRR+E+IVPQ IG QIS+IV + EG  F++D
Sbjct: 72   SECSKLYLAITGDSVALKFEKARCALADSLRRVEDIVPQTIGVQISEIVSELEGTAFALD 131

Query: 362  PLEKQVGDDLIALLQLGKQFSRHYGDMNEIQLFNQAASRLGITSTGXXXXXXXXXXXXXX 541
            PLEKQVGDD+IALLQ G++F+    D NE++ F+QAASRLGITS+               
Sbjct: 132  PLEKQVGDDIIALLQQGRKFNNS-NDNNELESFHQAASRLGITSSRAALTERRALKKLIE 190

Query: 542  RAKIEDDKRKESIVAYLSHHMRRYSKTFRTDVSDDNNSQGSTPCSPTVQGSSEGYGALDV 721
            RA+IE+DKRKESIVAYL H MR+YSK FR+++SDDN+SQGS PCSPTV GS E      V
Sbjct: 191  RARIEEDKRKESIVAYLLHLMRKYSKLFRSELSDDNDSQGSAPCSPTVMGSLEDGVGPAV 250

Query: 722  NGCTTDQKLSKLSSFNFKPNLRRLGHTTVPPEELRCPISLQLMYDPVIIASGQTYERICI 901
             G   +++LSKL SFNFKPN RR G   +P EELRCPISLQLMYDPVII+SGQTYERICI
Sbjct: 251  YGHAFERQLSKLGSFNFKPNNRRSGQMPLPQEELRCPISLQLMYDPVIISSGQTYERICI 310

Query: 902  EKWFRDGHNTCPKTQQELSHLCLIPNYCVKGLVTSCREQNGFAVPDGPPESLDLNYWRLA 1081
            EKWF DGHNTCPKTQQ+LSHLCL PNYCVKGL+ S  EQNG  VPDGPPESLDLNYWRLA
Sbjct: 311  EKWFSDGHNTCPKTQQQLSHLCLTPNYCVKGLIASWCEQNGVPVPDGPPESLDLNYWRLA 370

Query: 1082 LSEGEYNDAKLMDGTGSFKLNGKNVAPTEK 1171
            LSE E  ++K MD  GS K+ G  V P E+
Sbjct: 371  LSECESTNSKSMDSIGSCKMKGVKVVPLEE 400


>ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223545995|gb|EEF47498.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 774

 Score =  514 bits (1324), Expect = e-143
 Identities = 260/386 (67%), Positives = 310/386 (80%), Gaps = 1/386 (0%)
 Frame = +2

Query: 17   KLHGGMCTTLSAIYRRVLRIFPDLEAARPRSTSGIQALCSLHIALEKTKNILQHCADCSK 196
            KLHG MC  LSA Y ++L IFP LEAARPRS SGIQALCSLHIALEK KNILQHC++CSK
Sbjct: 17   KLHGEMCKALSATYCKILSIFPSLEAARPRSKSGIQALCSLHIALEKAKNILQHCSECSK 76

Query: 197  LYLAITGDSVVLKIERARSSLIDSLRRLEEIVPQDIGSQISKIVGDFEGIQFSIDPLEKQ 376
            LYLAITGDSV+LK E+ARS+L+DSLRR+E+IVPQ IGSQI +I+ + EGI FS+DPLEKQ
Sbjct: 77   LYLAITGDSVLLKFEKARSALVDSLRRVEDIVPQSIGSQILEIISELEGILFSLDPLEKQ 136

Query: 377  VGDDLIALLQLGKQFSRHYGDMNEIQLFNQAASRLGITSTGXXXXXXXXXXXXXXRAKIE 556
            VGD++I+LLQ G++F  +  D NE++ F+QAA++LGITS+               RA++E
Sbjct: 137  VGDEIISLLQQGRKFD-NCNDSNELESFHQAATKLGITSSRAALTERRALKKLIERARVE 195

Query: 557  DDKRKESIVAYLSHHMRRYSKTFRTDVSDDNNSQGSTPCSPTVQGS-SEGYGALDVNGCT 733
            +DKRKESIVAYL H MR+YSK FR++++DDN+SQGS PCSPTVQGS  EG     V+G  
Sbjct: 196  EDKRKESIVAYLLHLMRKYSKLFRSELTDDNDSQGSAPCSPTVQGSFDEG-----VDGHA 250

Query: 734  TDQKLSKLSSFNFKPNLRRLGHTTVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWF 913
             +++L+KLSSFNFKPN RR G   VPPEELRCPISLQLMYDPVIIASGQTYERICIEKWF
Sbjct: 251  FERQLTKLSSFNFKPNNRRSGQIPVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWF 310

Query: 914  RDGHNTCPKTQQELSHLCLIPNYCVKGLVTSCREQNGFAVPDGPPESLDLNYWRLALSEG 1093
             DGH+TCPKTQQ+LSHLCL PNYCVKGLVTS  EQNG  VPDGPPESLDLNY+RL+L + 
Sbjct: 311  SDGHDTCPKTQQKLSHLCLTPNYCVKGLVTSWCEQNGVPVPDGPPESLDLNYFRLSLCQS 370

Query: 1094 EYNDAKLMDGTGSFKLNGKNVAPTEK 1171
            E  +++ +D   S KL G  V P E+
Sbjct: 371  ESANSRSVDSINSGKLKGMKVVPLEE 396


>ref|XP_002314542.1| predicted protein [Populus trichocarpa] gi|222863582|gb|EEF00713.1|
            predicted protein [Populus trichocarpa]
          Length = 786

 Score =  501 bits (1290), Expect = e-139
 Identities = 250/384 (65%), Positives = 302/384 (78%)
 Frame = +2

Query: 17   KLHGGMCTTLSAIYRRVLRIFPDLEAARPRSTSGIQALCSLHIALEKTKNILQHCADCSK 196
            KLHG MC  LS IY ++L IFP LEAARPRS SGIQALCS+HIALEK KN+L+HC++CSK
Sbjct: 17   KLHGEMCKELSVIYCKILSIFPSLEAARPRSKSGIQALCSMHIALEKAKNVLRHCSECSK 76

Query: 197  LYLAITGDSVVLKIERARSSLIDSLRRLEEIVPQDIGSQISKIVGDFEGIQFSIDPLEKQ 376
            LYLAITGDSV+LK E+ARS+L+DSLRR+E+IVPQ IG +I +IV + EG  FS+DPLEKQ
Sbjct: 77   LYLAITGDSVLLKFEKARSALVDSLRRVEDIVPQSIGCEILEIVSELEGTVFSLDPLEKQ 136

Query: 377  VGDDLIALLQLGKQFSRHYGDMNEIQLFNQAASRLGITSTGXXXXXXXXXXXXXXRAKIE 556
            VGD++I LLQ G++F  +  D NE++ F++AA++LGITS+               RA++E
Sbjct: 137  VGDEIIVLLQQGRKFD-NCNDTNELESFHEAATKLGITSSRAALTERRALKKLIERARVE 195

Query: 557  DDKRKESIVAYLSHHMRRYSKTFRTDVSDDNNSQGSTPCSPTVQGSSEGYGALDVNGCTT 736
            +DKRKESIVAYL H MR+YSK FR+D++DDN+SQGS PCSPTV+GS E  G    +G   
Sbjct: 196  EDKRKESIVAYLLHLMRKYSKLFRSDLTDDNDSQGSAPCSPTVEGSFED-GGPGGDGHAF 254

Query: 737  DQKLSKLSSFNFKPNLRRLGHTTVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFR 916
            ++ LSKLSS NFKPN R+ G   +PPEELRCPISL LMYDPVIIASGQTYERICIEKWF 
Sbjct: 255  ERHLSKLSSLNFKPNFRKSGQMPLPPEELRCPISLHLMYDPVIIASGQTYERICIEKWFS 314

Query: 917  DGHNTCPKTQQELSHLCLIPNYCVKGLVTSCREQNGFAVPDGPPESLDLNYWRLALSEGE 1096
            DGH+TCPKTQQ+LSHLCL PNYCVKGLV S  EQNG   PDGPPESLDLNYWRLA+SE +
Sbjct: 315  DGHDTCPKTQQKLSHLCLTPNYCVKGLVASWCEQNGVPAPDGPPESLDLNYWRLAMSELD 374

Query: 1097 YNDAKLMDGTGSFKLNGKNVAPTE 1168
              +++ ++  GS KL G  V P E
Sbjct: 375  SANSRSVEIVGSGKLKGVKVIPLE 398


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