BLASTX nr result

ID: Bupleurum21_contig00024251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024251
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533914.1| ATP-binding cassette transporter, putative [...   155   2e-36
ref|XP_002316916.1| white-brown-complex ABC transporter family [...   147   9e-34
emb|CBI20349.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9...   146   2e-33
ref|XP_002329108.1| white-brown-complex ABC transporter family [...   135   4e-30

>ref|XP_002533914.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223526124|gb|EEF28469.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 632

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/120 (57%), Positives = 96/120 (80%)
 Frame = -1

Query: 362 LANGIVSGDSGEDQSTTKQSLISAFKKNKAGSLKAELQRSSDHIQNVREDKKFARWSTSW 183
           L+NGI S     DQ+T KQ+L++A+K N AG LKAE+Q   +++QN   DK+FARW+T+W
Sbjct: 302 LSNGISSYTDSRDQATVKQTLVTAYKDNLAGDLKAEVQAVDNNLQNSSNDKQFARWATTW 361

Query: 182 WEQFTVLLSRGLKERKHESFSGFRIVEVLVISFLSGLLWWKTDMTHIQDQTGLLFFSAGF 3
           W+QFTVL  RGLKERKHESF+G ++ +VL+++FLSGL+WW++  +H+QDQ GLLFF +GF
Sbjct: 362 WQQFTVLFRRGLKERKHESFAGIKVAQVLIVAFLSGLIWWRSG-SHLQDQIGLLFFYSGF 420


>ref|XP_002316916.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859981|gb|EEE97528.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 619

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/120 (56%), Positives = 94/120 (78%)
 Frame = -1

Query: 362 LANGIVSGDSGEDQSTTKQSLISAFKKNKAGSLKAELQRSSDHIQNVREDKKFARWSTSW 183
           LANG+ S  + E   + KQ+L+SA+K N A  LK+E+Q   D  Q+   D+K ARW+T+W
Sbjct: 293 LANGVSS--NSEVPGSVKQNLVSAYKSNLASKLKSEVQDIDDQPQDGLNDQKVARWATTW 350

Query: 182 WEQFTVLLSRGLKERKHESFSGFRIVEVLVISFLSGLLWWKTDMTHIQDQTGLLFFSAGF 3
           W+QF+VLL RG+KERKH+SFSG +I +VLV++FLSGLLWW++D++H+QDQ GLLFF +GF
Sbjct: 351 WQQFSVLLRRGVKERKHDSFSGLKIAQVLVVAFLSGLLWWQSDVSHLQDQMGLLFFYSGF 410


>emb|CBI20349.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/120 (54%), Positives = 92/120 (76%)
 Frame = -1

Query: 362 LANGIVSGDSGEDQSTTKQSLISAFKKNKAGSLKAELQRSSDHIQNVREDKKFARWSTSW 183
           LANG++S D  ED +T KQ+L+ +++      LKAEL+   +H+Q+  EDK+  RW+T+W
Sbjct: 294 LANGVLSDDIHEDPTTIKQTLVLSYRSKIDEGLKAELREIDNHLQDGLEDKQLDRWATTW 353

Query: 182 WEQFTVLLSRGLKERKHESFSGFRIVEVLVISFLSGLLWWKTDMTHIQDQTGLLFFSAGF 3
           W+Q +VL  RG+KER+HESFSG +I +VLV+ FLSGLLWW++D +H+QDQ GLLFF +GF
Sbjct: 354 WQQCSVLFRRGVKERRHESFSGLKIGQVLVVGFLSGLLWWQSDSSHLQDQIGLLFFCSGF 413


>ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9-like [Vitis vinifera]
          Length = 623

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/120 (54%), Positives = 92/120 (76%)
 Frame = -1

Query: 362 LANGIVSGDSGEDQSTTKQSLISAFKKNKAGSLKAELQRSSDHIQNVREDKKFARWSTSW 183
           LANG++S D  ED +T KQ+L+ +++      LKAEL+   +H+Q+  EDK+  RW+T+W
Sbjct: 294 LANGVLSDDIHEDPTTIKQTLVLSYRSKIDEGLKAELREIDNHLQDGLEDKQLDRWATTW 353

Query: 182 WEQFTVLLSRGLKERKHESFSGFRIVEVLVISFLSGLLWWKTDMTHIQDQTGLLFFSAGF 3
           W+Q +VL  RG+KER+HESFSG +I +VLV+ FLSGLLWW++D +H+QDQ GLLFF +GF
Sbjct: 354 WQQCSVLFRRGVKERRHESFSGLKIGQVLVVGFLSGLLWWQSDSSHLQDQIGLLFFCSGF 413


>ref|XP_002329108.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222869777|gb|EEF06908.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 619

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/120 (52%), Positives = 91/120 (75%)
 Frame = -1

Query: 362 LANGIVSGDSGEDQSTTKQSLISAFKKNKAGSLKAELQRSSDHIQNVREDKKFARWSTSW 183
           LANG+ S  + E   T KQ+L+SA+K N A  LK+E+    +  Q+   DK+ +RW+ +W
Sbjct: 293 LANGVSS--NSEVPGTVKQNLVSAYKSNLANKLKSEVHEIDNPSQDGLNDKQVSRWAITW 350

Query: 182 WEQFTVLLSRGLKERKHESFSGFRIVEVLVISFLSGLLWWKTDMTHIQDQTGLLFFSAGF 3
           W++F+VLL RG+KERK++SFSG +I +VLV++ LSGLLWW++D++HIQDQ GLLFF +GF
Sbjct: 351 WQEFSVLLIRGVKERKYDSFSGHKIGQVLVVAILSGLLWWQSDVSHIQDQMGLLFFYSGF 410


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