BLASTX nr result

ID: Bupleurum21_contig00024246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024246
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25249.3| unnamed protein product [Vitis vinifera]               64   3e-11
ref|XP_002276919.2| PREDICTED: LRR receptor-like serine/threonin...    65   4e-09
ref|XP_002271405.2| PREDICTED: probable LRR receptor-like serine...    59   1e-08
ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-08
ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine...    62   5e-08

>emb|CBI25249.3| unnamed protein product [Vitis vinifera]
          Length = 1979

 Score = 63.5 bits (153), Expect(2) = 3e-11
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = -2

Query: 372  SFIGKRPTDEMFSGETSLKDWVKENLHSS--EVLDTNLTGEEDMHLAVKEHCASFIFSLA 199
            +F  +RPTDE+FS E S+K+WV+++L  S  EV+D NL   ED     K+ C S +  LA
Sbjct: 1887 TFTRRRPTDEIFSEEMSMKNWVRDSLCGSVTEVVDANLLRGEDEQFMAKKQCISSVLGLA 1946

Query: 198  MECLRSSHIE 169
            ++C+  SH E
Sbjct: 1947 VDCVADSHEE 1956



 Score = 29.3 bits (64), Expect(2) = 3e-11
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -1

Query: 139  SHVERINMDDVLTSIYKIKTFFL 71
            SH ERINM DV+T++ KI   +L
Sbjct: 1953 SHEERINMKDVVTTLKKINLTYL 1975


>ref|XP_002276919.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO2-like [Vitis vinifera]
          Length = 1583

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
 Frame = -2

Query: 369  FIGKRPTDEMFSGETSLKDWVKENLHSS--EVLDTNLTGEEDMHLAVKEHCASFIFSLAM 196
            F  K+PTDEMF G+ +LK WV E+L S+  E +DTNL  +ED H A+KE+C   I +LA+
Sbjct: 1496 FARKKPTDEMFVGDPTLKSWV-ESLASTVMEFVDTNLLDKEDEHFAIKENCVLCIMALAL 1554

Query: 195  ECLRSS 178
            EC   S
Sbjct: 1555 ECTAES 1560


>ref|XP_002271405.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1087

 Score = 58.5 bits (140), Expect(2) = 1e-08
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = -2

Query: 372  SFIGKRPTDEMFSGETSLKDWVKENLHSS--EVLDTNLTGEEDMHLAVKEHCASFIFSLA 199
            +F  +RPTDE+FS E S+K+WV + L  S  EV+D NL   ED     K+ C S I  LA
Sbjct: 998  TFTRRRPTDEIFSEEMSMKNWVWDWLCGSITEVVDANLLRGEDEQFMAKKQCISLILGLA 1057

Query: 198  MECLRSS 178
            M+C+  S
Sbjct: 1058 MDCVADS 1064



 Score = 25.4 bits (54), Expect(2) = 1e-08
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 130  ERINMDDVLTSIYKIKT 80
            ERI M DV+T++ KIKT
Sbjct: 1067 ERIKMKDVVTTLKKIKT 1083


>ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|222860470|gb|EEE98017.1|
            predicted protein [Populus trichocarpa]
          Length = 1061

 Score = 62.4 bits (150), Expect(2) = 2e-08
 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
 Frame = -2

Query: 372  SFIGKRPTDEMFSGETSLKDWVKENLHS--SEVLDTNLTGEEDMHLAVKEHCASFIFSLA 199
            +F  K+PTD+MF GE SLK+WVK++L    +EV+D NL  EE+ H   K+ C + I +LA
Sbjct: 963  TFTRKKPTDDMFGGEMSLKNWVKQSLPKAITEVIDANLLIEEE-HFVAKKDCITSILNLA 1021

Query: 198  MEC 190
            +EC
Sbjct: 1022 LEC 1024



 Score = 20.8 bits (42), Expect(2) = 2e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 130  ERINMDDVLTSIYKIK 83
            ERI M DVL ++ KIK
Sbjct: 1031 ERICMRDVLPALEKIK 1046


>ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1160

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = -2

Query: 372  SFIGKRPTDEMFSGETSLKDWVKENL-HSSEVLDTNLTGEEDMHLAVKEHCASFIFSLAM 196
            +F  K+PTDEMF GE +L+ WV+       EV+D NL   ED H  +KE C   I +LA+
Sbjct: 1071 TFARKKPTDEMFGGEVTLRSWVESLAGRVMEVVDGNLVRREDQHFGIKESCLRSIMALAL 1130

Query: 195  ECLRSS 178
            EC   S
Sbjct: 1131 ECTTES 1136


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