BLASTX nr result

ID: Bupleurum21_contig00024243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024243
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69041.1| hypothetical protein VITISV_022339 [Vitis vinifera]    74   1e-11
ref|XP_002519891.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|NP_564380.1| uncharacterized protein [Arabidopsis thaliana] ...    68   9e-10
ref|XP_002326779.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_004149003.1| PREDICTED: uncharacterized protein LOC101211...    66   3e-09

>emb|CAN69041.1| hypothetical protein VITISV_022339 [Vitis vinifera]
          Length = 404

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = -3

Query: 280 VQDLLSQVMDDSVLEQVSAINCSGFSDSVLPTQLETRFSKLKSFPSAK 137
           V++++SQ  D  +LEQV+AINCS FSDSVLPT+LETRFSKLKSFPS+K
Sbjct: 15  VEEIISQANDLLILEQVAAINCSAFSDSVLPTELETRFSKLKSFPSSK 62


>ref|XP_002519891.1| conserved hypothetical protein [Ricinus communis]
           gi|223540937|gb|EEF42495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/48 (70%), Positives = 42/48 (87%)
 Frame = -3

Query: 280 VQDLLSQVMDDSVLEQVSAINCSGFSDSVLPTQLETRFSKLKSFPSAK 137
           V++L+SQV D SVLEQVS INCSGF+DS+LPT L+TRF KLKSF ++K
Sbjct: 15  VEELISQVKDLSVLEQVSKINCSGFTDSLLPTDLDTRFRKLKSFNTSK 62


>ref|NP_564380.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12322544|gb|AAG51273.1|AC027135_14 unknown protein
           [Arabidopsis thaliana] gi|26450690|dbj|BAC42454.1|
           unknown protein [Arabidopsis thaliana]
           gi|28950867|gb|AAO63357.1| At1g31460 [Arabidopsis
           thaliana] gi|332193237|gb|AEE31358.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 301

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/89 (46%), Positives = 54/89 (60%)
 Frame = -3

Query: 280 VQDLLSQVMDDSVLEQVSAINCSGFSDSVLPTQLETRFSKLKSFPSAKPMSQIPPLEPLS 101
           V++L+SQ  + S LEQV+AINCSGF+DS LP  LE+RF +LKS P+A      P  EP+S
Sbjct: 15  VEELISQAKELSDLEQVAAINCSGFTDSTLPDDLESRFRRLKSLPAA------PRHEPVS 68

Query: 100 PQFESELKKKETTQSDEFNVNVSNLSEAP 14
               S  ++K  + S   NVN S     P
Sbjct: 69  SS-SSMNRQKPLSHSKSVNVNFSGNRRNP 96


>ref|XP_002326779.1| predicted protein [Populus trichocarpa] gi|222834101|gb|EEE72578.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/48 (68%), Positives = 37/48 (77%)
 Frame = -3

Query: 280 VQDLLSQVMDDSVLEQVSAINCSGFSDSVLPTQLETRFSKLKSFPSAK 137
           V +L+SQ  +  VLEQVS INCSGF+DSVLP  LETRF KLKSFP  K
Sbjct: 15  VDELVSQTQELCVLEQVSKINCSGFTDSVLPADLETRFHKLKSFPPTK 62


>ref|XP_004149003.1| PREDICTED: uncharacterized protein LOC101211778 [Cucumis sativus]
           gi|449515027|ref|XP_004164551.1| PREDICTED:
           uncharacterized LOC101211778 [Cucumis sativus]
          Length = 292

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = -3

Query: 280 VQDLLSQVMDDSVLEQVSAINCSGFSDSVLPTQLETRFSKLKSFPSAK 137
           V+DLLSQ  D  +LEQ+SAINCS F+ S LP+ LE+RF KLKSFP+AK
Sbjct: 15  VEDLLSQTQDLCLLEQISAINCSSFTHSDLPSDLESRFRKLKSFPAAK 62


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