BLASTX nr result

ID: Bupleurum21_contig00024227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024227
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520639.1| PREDICTED: zinc finger CCCH domain-containin...   426   e-117
ref|XP_002525195.1| zinc finger protein, putative [Ricinus commu...   426   e-117
ref|XP_002326328.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_003542494.1| PREDICTED: zinc finger CCCH domain-containin...   419   e-115
ref|XP_002312050.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114

>ref|XP_003520639.1| PREDICTED: zinc finger CCCH domain-containing protein 11-like
           [Glycine max]
          Length = 356

 Score =  426 bits (1096), Expect = e-117
 Identities = 208/268 (77%), Positives = 224/268 (83%)
 Frame = +2

Query: 2   KYVQHLQQSVQPKPDPSKIASXXXXXXXXXXXXXLNDLFKVAVSQPKVPVGVDPKSILCE 181
           KYVQ+L+QSVQP PD SK+A+             LNDLFK+AVSQPKVPVGVDPKSILCE
Sbjct: 36  KYVQNLKQSVQPNPDSSKLAAKKKKEEEKAKDKELNDLFKIAVSQPKVPVGVDPKSILCE 95

Query: 182 FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDTRDEGKDTMEDWDQDTLEKVVASKGQE 361
           F+KVGQC KGFKCKFSHDLNVQRKGEKIDIYSD RDE  +TMEDWDQ+TLEKVV SK  E
Sbjct: 96  FFKVGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDE--ETMEDWDQETLEKVVESKKTE 153

Query: 362 YNQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLXXXX 541
           YNQNKPTDIVCK+FLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALL    
Sbjct: 154 YNQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEES 213

Query: 542 XXXXXXXXXXNQRAKLTTSTPMTPELFMQWKKKKLEARDAGLAAQMAERAKNDRMSGREL 721
                     NQRAK+TT+TPMTPELFMQWKKKK+E RDA LAAQ AERAKNDRMSGREL
Sbjct: 214 EKITIEEEIENQRAKVTTTTPMTPELFMQWKKKKIEERDANLAAQQAERAKNDRMSGREL 273

Query: 722 FLSDSSLFVDDAEAYDKYQRDDNSNASE 805
           FLSD+SLFVDD EAYDKYQR+  S + +
Sbjct: 274 FLSDASLFVDDDEAYDKYQREPESESGD 301


>ref|XP_002525195.1| zinc finger protein, putative [Ricinus communis]
           gi|223535492|gb|EEF37161.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 363

 Score =  426 bits (1094), Expect = e-117
 Identities = 207/270 (76%), Positives = 227/270 (84%)
 Frame = +2

Query: 2   KYVQHLQQSVQPKPDPSKIASXXXXXXXXXXXXXLNDLFKVAVSQPKVPVGVDPKSILCE 181
           KYVQ+L+QSVQPKPD SK A+             LNDLFKVAVSQPKVP+GVDPKSILCE
Sbjct: 36  KYVQNLKQSVQPKPDSSKTAAKKKKEEEKAKEKELNDLFKVAVSQPKVPIGVDPKSILCE 95

Query: 182 FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDTRDEGKDTMEDWDQDTLEKVVASKGQE 361
           F+K GQCAKGFKCKFSHDLNVQRKGEKIDIYSD RD+  +TMEDWDQ+TLEKVV SK  E
Sbjct: 96  FFKAGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDQ--ETMEDWDQETLEKVVESKKTE 153

Query: 362 YNQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLXXXX 541
           YNQNKPTDIVCK+FL+AVEKKQYGWFWVCPNGGK+CHYRHALPPGYVLKSQMKALL    
Sbjct: 154 YNQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEEA 213

Query: 542 XXXXXXXXXXNQRAKLTTSTPMTPELFMQWKKKKLEARDAGLAAQMAERAKNDRMSGREL 721
                     NQRAKLT STPMTPELFMQWK KK+E RDAGLAAQ AERAKNDRMSGREL
Sbjct: 214 DKIPIEEEIENQRAKLTASTPMTPELFMQWKNKKIEERDAGLAAQRAERAKNDRMSGREL 273

Query: 722 FLSDSSLFVDDAEAYDKYQRDDNSNASEER 811
           FLSD+SLFVDDAEAY++YQR++ S+  E++
Sbjct: 274 FLSDASLFVDDAEAYEEYQREEQSDGPEQK 303


>ref|XP_002326328.1| predicted protein [Populus trichocarpa] gi|222833521|gb|EEE71998.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  424 bits (1090), Expect = e-116
 Identities = 205/270 (75%), Positives = 229/270 (84%)
 Frame = +2

Query: 2   KYVQHLQQSVQPKPDPSKIASXXXXXXXXXXXXXLNDLFKVAVSQPKVPVGVDPKSILCE 181
           KYVQ L+Q+VQP+PDPSK+A+             LN+LFKVAVSQPKVPVGVDPKSILCE
Sbjct: 36  KYVQSLKQNVQPQPDPSKLAAKKKKEEEKAKEKELNELFKVAVSQPKVPVGVDPKSILCE 95

Query: 182 FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDTRDEGKDTMEDWDQDTLEKVVASKGQE 361
           F+KVGQCAKGFKCKFSHDLNVQRKGEKIDIYSD RD+  +TMEDWDQ+TLEKVV SKG+E
Sbjct: 96  FFKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDQ--ETMEDWDQETLEKVVESKGKE 153

Query: 362 YNQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLXXXX 541
           Y QNKPTDIVCK+FL+AVEKKQYGWFWVCPNGGK+CHYRHALPPGYVLKSQMKALL    
Sbjct: 154 YQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLDEEA 213

Query: 542 XXXXXXXXXXNQRAKLTTSTPMTPELFMQWKKKKLEARDAGLAAQMAERAKNDRMSGREL 721
                     NQRAK TTST MTPELFMQWKKKK+E RD GLAAQ AERAKNDRMSGREL
Sbjct: 214 EKISIEEEIENQRAKTTTSTSMTPELFMQWKKKKMEERDFGLAAQRAERAKNDRMSGREL 273

Query: 722 FLSDSSLFVDDAEAYDKYQRDDNSNASEER 811
           FLSD+S+FVDDAEAY+KYQR++  + +E++
Sbjct: 274 FLSDASVFVDDAEAYEKYQREEEPDGTEQK 303


>ref|XP_003542494.1| PREDICTED: zinc finger CCCH domain-containing protein 11-like
           [Glycine max]
          Length = 361

 Score =  419 bits (1076), Expect = e-115
 Identities = 203/269 (75%), Positives = 224/269 (83%)
 Frame = +2

Query: 2   KYVQHLQQSVQPKPDPSKIASXXXXXXXXXXXXXLNDLFKVAVSQPKVPVGVDPKSILCE 181
           KYVQ+L+QSVQP+PD +K+ +             LNDLFK+AV+QPKVPVGVDPKSILCE
Sbjct: 36  KYVQNLKQSVQPRPDTAKVDAKKKKEEEKAKEKELNDLFKIAVTQPKVPVGVDPKSILCE 95

Query: 182 FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDTRDEGKDTMEDWDQDTLEKVVASKGQE 361
           FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSD RD+  +TMEDWDQ+TLEKVV SK  E
Sbjct: 96  FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDQ--ETMEDWDQETLEKVVESKKTE 153

Query: 362 YNQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLXXXX 541
           YNQNKPTDIVCK+FLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALL    
Sbjct: 154 YNQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLEEES 213

Query: 542 XXXXXXXXXXNQRAKLTTSTPMTPELFMQWKKKKLEARDAGLAAQMAERAKNDRMSGREL 721
                     NQRAK+ T+TPMTPELF +WKKKK+E RDA +AAQ AERAKNDRMSGREL
Sbjct: 214 EKISIEEEIENQRAKVATTTPMTPELFFEWKKKKIEERDANIAAQQAERAKNDRMSGREL 273

Query: 722 FLSDSSLFVDDAEAYDKYQRDDNSNASEE 808
           FLS++SLFVDDAEAYD YQR+  S  +EE
Sbjct: 274 FLSNASLFVDDAEAYDVYQREPESYETEE 302


>ref|XP_002312050.1| predicted protein [Populus trichocarpa] gi|222851870|gb|EEE89417.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  417 bits (1071), Expect = e-114
 Identities = 206/271 (76%), Positives = 222/271 (81%)
 Frame = +2

Query: 2   KYVQHLQQSVQPKPDPSKIASXXXXXXXXXXXXXLNDLFKVAVSQPKVPVGVDPKSILCE 181
           KYVQ+LQQ+VQPK DPSKIA+             LNDLFKVAVSQPKVPVGVDPKSILCE
Sbjct: 35  KYVQNLQQAVQPKLDPSKIAAKKKKEEEKAREKELNDLFKVAVSQPKVPVGVDPKSILCE 94

Query: 182 FYKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDTRDEGKDTMEDWDQDTLEKVVASKGQE 361
           F+K GQCAKGFKCKFSHDLNVQRKGEKIDIYSD RDE  DTMEDWDQ+TLEKVV SK  E
Sbjct: 95  FFKAGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDE--DTMEDWDQETLEKVVESKKNE 152

Query: 362 YNQNKPTDIVCKHFLDAVEKKQYGWFWVCPNGGKNCHYRHALPPGYVLKSQMKALLXXXX 541
           YNQNKPTDIVCK+FL+ VEKKQYGWFW CPNGGK+CHYRHALPPGYVLKSQMKALL    
Sbjct: 153 YNQNKPTDIVCKYFLEVVEKKQYGWFWSCPNGGKDCHYRHALPPGYVLKSQMKALLEEEA 212

Query: 542 XXXXXXXXXXNQRAKLTTSTPMTPELFMQWKKKKLEARDAGLAAQMAERAKNDRMSGREL 721
                     NQRAKLT STPMTPELF QWK KK E R+AGLAA+ AERAKNDRMSGREL
Sbjct: 213 DKIPIEEEIENQRAKLTASTPMTPELFTQWKTKKAEEREAGLAAKRAERAKNDRMSGREL 272

Query: 722 FLSDSSLFVDDAEAYDKYQRDDNSNASEERN 814
           FLSDSS+FVDDAEAY+ YQR +    +EE++
Sbjct: 273 FLSDSSVFVDDAEAYENYQRGEELVVTEEKS 303


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