BLASTX nr result

ID: Bupleurum21_contig00024201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024201
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD,...   138   5e-31
emb|CBI14773.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas...   135   3e-30
sp|O24133.1|CHLD_TOBAC RecName: Full=Magnesium-chelatase subunit...   131   5e-29
ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29

>ref|XP_004140205.1| PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic-like
           [Cucumis sativus]
          Length = 748

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/83 (85%), Positives = 78/83 (93%), Gaps = 1/83 (1%)
 Frame = +2

Query: 29  NSNGAVGVAPE-KLTSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGTAKT 205
           +SNGAV  A + + TSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGTAKT
Sbjct: 53  SSNGAVAAADQPETTSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRGTAKT 112

Query: 206 VMARGLHAILPPIDVVIGSMSNA 274
           VMARGLHA+LPPI+VV+GS+SNA
Sbjct: 113 VMARGLHAVLPPIEVVVGSISNA 135


>emb|CBI14773.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  135 bits (341), Expect = 3e-30
 Identities = 77/93 (82%), Positives = 82/93 (88%), Gaps = 2/93 (2%)
 Frame = +2

Query: 2   ATLESSSATNSNGAVGVAPEK--LTSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIA 175
           ATLESS     NGA+ VA E    TSYGRQ+FPLAAVVGQDAIKTALLLGAIDREIGGIA
Sbjct: 49  ATLESS-----NGAI-VAEESDNSTSYGRQFFPLAAVVGQDAIKTALLLGAIDREIGGIA 102

Query: 176 ISGKRGTAKTVMARGLHAILPPIDVVIGSMSNA 274
           ISGKRGTAKTVMARGLHAILPPIDVV+GS++NA
Sbjct: 103 ISGKRGTAKTVMARGLHAILPPIDVVVGSIANA 135


>ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative
           [Ricinus communis] gi|223547442|gb|EEF48937.1|
           Magnesium-chelatase subunit chlD, chloroplast precursor,
           putative [Ricinus communis]
          Length = 760

 Score =  135 bits (340), Expect = 3e-30
 Identities = 76/94 (80%), Positives = 84/94 (89%), Gaps = 7/94 (7%)
 Frame = +2

Query: 14  SSSAT----NSNGAVGVAPEK---LTSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGI 172
           SSSAT    ++NGAV V+P +    +SYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGI
Sbjct: 59  SSSATPTLQSTNGAV-VSPSQNPDSSSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGI 117

Query: 173 AISGKRGTAKTVMARGLHAILPPIDVVIGSMSNA 274
           AISGKRGTAKTVMARGLHAILPPIDVV+GS++NA
Sbjct: 118 AISGKRGTAKTVMARGLHAILPPIDVVVGSIANA 151


>sp|O24133.1|CHLD_TOBAC RecName: Full=Magnesium-chelatase subunit ChlD, chloroplastic;
           Short=Mg-chelatase subunit D; AltName:
           Full=Mg-protoporphyrin IX chelatase subunit ChlD; Flags:
           Precursor gi|2239151|emb|CAA71128.1| CHLD magnesium
           chelatase subunit [Nicotiana tabacum]
          Length = 758

 Score =  131 bits (330), Expect = 5e-29
 Identities = 72/94 (76%), Positives = 82/94 (87%), Gaps = 7/94 (7%)
 Frame = +2

Query: 14  SSSAT--NSNGAVGVA-----PEKLTSYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGI 172
           S++AT  + NGAV V      PEK+ S+GRQYFPLAAV+GQDAIKTALLLGAIDREIGGI
Sbjct: 49  SATATIDSPNGAVAVVEPEKQPEKI-SFGRQYFPLAAVIGQDAIKTALLLGAIDREIGGI 107

Query: 173 AISGKRGTAKTVMARGLHAILPPIDVVIGSMSNA 274
           AI GKRGTAKT+MARGLHAILPPI+VV+GSM+NA
Sbjct: 108 AICGKRGTAKTLMARGLHAILPPIEVVVGSMANA 141


>ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|222850499|gb|EEE88046.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  130 bits (328), Expect = 8e-29
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 5/87 (5%)
 Frame = +2

Query: 29  NSNGAVGV---APEKLTS--YGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRG 193
           + NGAV     A EKL S  YGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRG
Sbjct: 67  SGNGAVATPNTATEKLDSSYYGRQYFPLAAVVGQDAIKTALLLGAIDREIGGIAISGKRG 126

Query: 194 TAKTVMARGLHAILPPIDVVIGSMSNA 274
           TAKTVMARGLH +LPPIDVV+GS++NA
Sbjct: 127 TAKTVMARGLHEVLPPIDVVMGSIANA 153


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