BLASTX nr result

ID: Bupleurum21_contig00024197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024197
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACQ84011.1| scarecrow 1 [Lupinus albus] gi|229615790|gb|ACQ84...    96   4e-18
gb|ACR48080.1| scarecrow 2 [Lupinus albus] gi|238625626|gb|ACR48...    96   5e-18
sp|Q2Z2E9.1|SCR_IPONI RecName: Full=Protein SCARECROW; Short=PnS...    93   3e-17
ref|XP_002326418.1| GRAS family transcription factor [Populus tr...    91   1e-16
ref|XP_003623699.1| Scarecrow [Medicago truncatula] gi|124360295...    88   7e-16

>gb|ACQ84011.1| scarecrow 1 [Lupinus albus] gi|229615790|gb|ACQ84012.1| scarecrow 1
           [Lupinus albus]
          Length = 776

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = +2

Query: 185 DTSQHISPSVCVFSGLPLFPPVQQSLLPPSATLGHHSTDSSLGIGTADGLNNSSSGSAMT 364
           D +Q  SP+VC FSGLPLFP  QQ     +++    ST +++ +  +  + ++++ SA T
Sbjct: 164 DQNQLTSPAVCGFSGLPLFPASQQRNHHHNSS-SSSSTGANVEVAASPSMEDNNNNSAAT 222

Query: 365 -WIDGIIKDLIHSSSLVSIPQLINNVRDIIHPCNP 466
            WIDGI+KDLIHSS+ VSIPQLINNVR+II+PCNP
Sbjct: 223 AWIDGILKDLIHSSNSVSIPQLINNVREIIYPCNP 257


>gb|ACR48080.1| scarecrow 2 [Lupinus albus] gi|238625626|gb|ACR48081.1| scarecrow 2
           [Lupinus albus]
          Length = 770

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 7/101 (6%)
 Frame = +2

Query: 185 DTSQHISPSVCVFSGLPLFPPVQQSLLPPSATLGHHSTDSSLGIG-------TADGLNNS 343
           D +Q  SP+VC FSGLPLFP  QQ          HH   +S G         + +  NN+
Sbjct: 165 DQNQLTSPAVCGFSGLPLFPASQQR--------NHHHNSTSTGATVEVAASPSMEDNNNN 216

Query: 344 SSGSAMTWIDGIIKDLIHSSSLVSIPQLINNVRDIIHPCNP 466
           ++ +A  WIDGI+KDLIHSS+ VSIPQLI+NVR+II+PCNP
Sbjct: 217 NNSAATDWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNP 257


>sp|Q2Z2E9.1|SCR_IPONI RecName: Full=Protein SCARECROW; Short=PnSCR
           gi|82581260|dbj|BAE48702.1| SCARECROW [Ipomoea nil]
          Length = 783

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 6/91 (6%)
 Frame = +2

Query: 212 VCVFSGLPLFPPVQQS------LLPPSATLGHHSTDSSLGIGTADGLNNSSSGSAMTWID 373
           +CVFSGLPLFP   ++       L P A L   ++ S++G+ ++ G     +G+AM WID
Sbjct: 171 LCVFSGLPLFPAPSRARNAAGAALQP-APLPVTASGSAIGVNSSSGGGMGDNGTAMAWID 229

Query: 374 GIIKDLIHSSSLVSIPQLINNVRDIIHPCNP 466
           GIIKDLIH S+ VSIPQLI NVR+IIHPCNP
Sbjct: 230 GIIKDLIHISTHVSIPQLIQNVREIIHPCNP 260


>ref|XP_002326418.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222833611|gb|EEE72088.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 847

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
 Frame = +2

Query: 131 TIDGSSQRLPHHQSAGPTDTSQHISPSVCVFSGLPLFPP------VQQSLLPPSATLGHH 292
           ++ G     P    A   + +Q   P+VC FSGLPLFPP      V+ + +PP   +   
Sbjct: 171 SVSGFLSSTPSTNLATSCNDNQSQLPAVCGFSGLPLFPPERERNIVRSNAVPPPGLI--- 227

Query: 293 STDSSLGIGTADGLNNSSSGSAMTWIDGIIKDLIHSSSLVSIPQLINNVRDIIHPCNP 466
            T SS    T   + +++  +A  WIDGIIKDL+HSS+ VS+PQLI NVR+II+PCNP
Sbjct: 228 -TTSSASTPTPPSMEDAAPATA--WIDGIIKDLLHSSTNVSVPQLIQNVREIIYPCNP 282


>ref|XP_003623699.1| Scarecrow [Medicago truncatula] gi|124360295|gb|ABN08308.1|
           Flagellar basal body rod protein; GRAS transcription
           factor [Medicago truncatula] gi|355498714|gb|AES79917.1|
           Scarecrow [Medicago truncatula]
          Length = 805

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
 Frame = +2

Query: 137 DGSSQRLPHHQSAGPTDTSQHISPSVCVFSGLPLFPPVQQSLLPPSATLGHHSTDSSLGI 316
           + S+    H Q   P    Q+  P++C FSGLPLFP   Q    P+ T   +S  +    
Sbjct: 170 NSSTSNYAHFQQ--PLVEEQNHVPNICGFSGLPLFPSQNQ----PNRTSNRNSNSNISSA 223

Query: 317 GTADGLNNSSSGSAM-------TWIDGIIKDLIHSSSLVSIPQLINNVRDIIHPCNP 466
                + NSS+ S M        WIDGI+KDLIH+S+ VSIPQLINNVR+II+PCNP
Sbjct: 224 TNIVDVVNSSTPSMMDETSATTNWIDGILKDLIHTSNSVSIPQLINNVREIIYPCNP 280


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