BLASTX nr result

ID: Bupleurum21_contig00024195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024195
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263...   180   6e-43
ref|XP_002531306.1| conserved hypothetical protein [Ricinus comm...   170   6e-40
ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|2...   162   9e-38
ref|XP_002329293.1| predicted protein [Populus trichocarpa] gi|2...   109   1e-21
emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]    98   3e-18

>ref|XP_002280570.2| PREDICTED: uncharacterized protein LOC100263470 [Vitis vinifera]
            gi|296087265|emb|CBI33639.3| unnamed protein product
            [Vitis vinifera]
          Length = 1004

 Score =  180 bits (456), Expect = 6e-43
 Identities = 139/349 (39%), Positives = 189/349 (54%), Gaps = 22/349 (6%)
 Frame = -3

Query: 987  RNITRTDSSLARLGETKKGSDINN--GVVSFTFSSSKKQKDRMLAESHD-RGYQSECTCS 817
            +N T   +++A L E+  G+ +N    V+SFTF+S  + K  MLAE  + R  QS+  C+
Sbjct: 542  KNQTCVKNAVASLRESD-GAHVNKEIDVISFTFNSPMRNKTGMLAEMGEKRRDQSDVICN 600

Query: 816  NSSQ-KNSILDEIHKYESACSYKSYASTGDTLGVLLEQKLKELSSQEDIQMALGGSSLNQ 640
            ++S+ +  ILDE +  ++    KS+    D LG  L +KLKEL+S E+ +++ GG+   +
Sbjct: 601  STSRPRKLILDEDNGKKAF--QKSFPLRVDALGAFLGKKLKELASAEEDELSAGGTPTKR 658

Query: 639  RSAIILQELISALTVQRSFHVNDVVVRPTEIGGSSCCV-----------HTSTAHPPFQA 493
              A+ILQELISALT ++     D  VR  +    + C            H S  +  FQA
Sbjct: 659  CPAMILQELISALTEEKPVSQYDGAVRINQNDNLTYCNKDPSDHVCSNGHMSKKNVTFQA 718

Query: 492  HQNKAATQARYPNDGNNNNMSPLSVLEACISNESCLSSSLDDGSVHKLQTDFIDMSCN-- 319
                  T     +DG++   SP SVLEA  SNES  SSSLDD S HKL    ID S +  
Sbjct: 719  KAKTEGTSFTVSHDGDHQ--SPGSVLEASFSNES-FSSSLDDSSGHKLHPGSIDYSYDQP 775

Query: 318  -----DQQVEPGAISLTKERPGIELVADFVNNISEILCSMDLVDSRLKGCKLAHAERVIL 154
                 D  +   A SL+K R G E VAD VN IS I+ +++L  +RL G KL H + VIL
Sbjct: 776  ESSEADTDLLDSATSLSKWRTGSEAVADLVNYISSIVHAINLPGARLGGSKLTHVKEVIL 835

Query: 153  NTELLFGNKFRLNSDETKRFSIRHFIVNELETLGSVLWTNFGCFSESED 7
            N ELLFGN    NSD  + F + HF+V ELETL    WT    F   ED
Sbjct: 836  NAELLFGNAALANSDGCRSF-LGHFLVAELETLTCATWTKSDIFPGFED 883


>ref|XP_002531306.1| conserved hypothetical protein [Ricinus communis]
            gi|223529097|gb|EEF31078.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 869

 Score =  170 bits (430), Expect = 6e-40
 Identities = 124/336 (36%), Positives = 175/336 (52%), Gaps = 11/336 (3%)
 Frame = -3

Query: 975  RTDSSLARLGETKKGSDINNGVVSFTFSSSKKQK-DRMLA---ESHDRGYQSECTCSNSS 808
            RT SS A+L         +NG+VS T    +  K D M+    E       +  + +++S
Sbjct: 451  RTASSNAQLE--------SNGLVSSTSMRHRNIKCDLMIRKELEPDGNKNNNVISLNHAS 502

Query: 807  QKNSILDEIHKYESACSYKSYASTGDTLGVLLEQKLKELSSQEDIQMALGGSSLNQRSAI 628
             K     +        S +     GDTLG LLEQKLKEL+SQE+ ++A+GGS+  + +A+
Sbjct: 503  IKTRSASQERNDVKTFSQRKIPLDGDTLGALLEQKLKELTSQEEDELAIGGSAPKRSTAM 562

Query: 627  ILQELISALTVQRSFHVNDVVVRPTEIGGSSCCVHTSTAHPPFQAHQNKAATQARYPNDG 448
            ILQELISAL  Q+           + +G      H S A   FQ     +          
Sbjct: 563  ILQELISALVEQQPL---------SPVG------HMSNAESAFQVALLSSTC-------- 599

Query: 447  NNNNMSPLSVLEACISNESCLSSSLDDGSVHKLQTDFIDMSCN-------DQQVEPGAIS 289
              +++SP SVLEA  SNESC SSS+DD S  +L  D +D SC+       D +++  A S
Sbjct: 600  --DHLSPGSVLEASFSNESCFSSSVDDNSGRRLFYDSVDYSCDQLQPIETDAELQDSATS 657

Query: 288  LTKERPGIELVADFVNNISEILCSMDLVDSRLKGCKLAHAERVILNTELLFGNKFRLNSD 109
              + R G  +V D +N++S IL S++L D  L G +L +   VILN ELLFG+    NSD
Sbjct: 658  GNEGRMGSIMVTDLLNHLSVILQSINLADGGLTGARLTYVREVILNAELLFGSAALQNSD 717

Query: 108  ETKRFSIRHFIVNELETLGSVLWTNFGCFSESEDTE 1
              K   I  F++NELETL   +WTNF C S  E+++
Sbjct: 718  RMKSSFIGPFLLNELETLAGTMWTNFNCLSGFEESK 753


>ref|XP_002305171.1| predicted protein [Populus trichocarpa] gi|222848135|gb|EEE85682.1|
            predicted protein [Populus trichocarpa]
          Length = 978

 Score =  162 bits (411), Expect = 9e-38
 Identities = 119/348 (34%), Positives = 172/348 (49%), Gaps = 10/348 (2%)
 Frame = -3

Query: 1020 SQTMVRGDVQSRNITRTDSSLARLGETKKGSDINNGVVSFTFSSSKKQKDRMLAESHDRG 841
            S +M R  ++SR++   + +       K      N  +SFTF+S  + +  +     +R 
Sbjct: 544  SLSMDRACIRSRSVNDGECN-------KNNGSRENDAISFTFNSPFRHRTFVSKGLKERS 596

Query: 840  YQSECTCSNSSQKNSILDEIHKYESACSYKSYASTGDTLGVLLEQKLKELSSQEDIQMAL 661
             Q +   S+  Q+  +LDE            +   GD LG +LEQKLKEL+SQE  ++  
Sbjct: 597  LQIDKNTSH--QRRLVLDE--NDGKTPLQNQFPLRGDALGTILEQKLKELASQEQDELTS 652

Query: 660  GGSSLNQRSAIILQELISALTVQRSFHVNDVVVRPTEIGGSSCCVHTSTAHPPFQAHQNK 481
            GGS   + +A+ILQELI ALT  +    +                H   A   +Q     
Sbjct: 653  GGSKPMRSTAMILQELIFALTADQPMSPH---------------AHMFNADKTYQKEVKI 697

Query: 480  AATQARYPNDGNNNNMSPLSVLEACISNESCLSSSLDDGSVHKLQTDFIDMSCN------ 319
                     DG++  +SP SVLEA  SN+SC+SSSLD+ S  ++  D +D S +      
Sbjct: 698  RRNSVGISVDGDH--LSPGSVLEASFSNDSCISSSLDESSGRRMLLDSMDCSYDQPQPVD 755

Query: 318  -DQQVEPGAISLTKERPGIELVADFVNNISEILCSMDLVDSRLKGCKLAHAERVILNTEL 142
             D  +   A SL + R G +   D +N++S IL S++L   RL G KL HA+ VILN EL
Sbjct: 756  TDADLLDCASSLIQGRTGSKTATDLLNHVSRILQSINLAGGRLTGNKLTHAKEVILNAEL 815

Query: 141  LFGNKFRLNSDETKRFSIRHFIVNELETLGSVLWTNFGC---FSESED 7
            LFG     NSD  KRF +  F+++ LETL   LW N  C   F ES++
Sbjct: 816  LFGKATLCNSDRMKRFLVGPFLLDGLETLAGALWKNLNCLPGFEESKE 863


>ref|XP_002329293.1| predicted protein [Populus trichocarpa] gi|222870747|gb|EEF07878.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  109 bits (272), Expect = 1e-21
 Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
 Frame = -3

Query: 447 NNNNMSPLSVLEACISNESCLSSSLDDGSVHKLQTDFIDMSCNDQQ-------VEPGAIS 289
           + +++SP SVLEA  SN+SC SSSLDD S  ++  D +D S +  Q       +   A S
Sbjct: 96  DGDHLSPGSVLEASFSNDSCFSSSLDDSSGCRMLLDSMDYSYDQPQPVVTHADLLDCATS 155

Query: 288 LTKERPGIELVADFVNNISEILCSMDLVDSRLKGCKLAHAERVILNTELLFGNKFRLNSD 109
           L   R G  +  D +N++S IL S++L    L G +L+HA+ VILNTELLFGN    NSD
Sbjct: 156 LIPGRTGSRIATDLLNHVSRILQSINLAGGGLTGNQLSHAKEVILNTELLFGNATLCNSD 215

Query: 108 ETKRFSIRHFIVNELETLGSVLWTNFGCFSESEDTE 1
             KRF I   +++  E L   +W N  C    ED++
Sbjct: 216 RMKRFLIGSLLLDGHEALAGAMWKNLNCLLGFEDSK 251


>emb|CAN61844.1| hypothetical protein VITISV_004819 [Vitis vinifera]
          Length = 1101

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 71/172 (41%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
 Frame = -3

Query: 501  FQAHQNKAATQARYPNDGNNNNMSPLSVLEACISNESCLSSSLDDGSVHKLQTDFIDMSC 322
            +QA      T     +DG++   SP SVLEA  SNE            HKL    ID S 
Sbjct: 823  YQAKAKTEGTSFTVSHDGDHQ--SPGSVLEASFSNER-----------HKLHPGSIDYSY 869

Query: 321  N-------DQQVEPGAISLTKERPGIELVADFVNNISEILCSMDLVDSRLKGCKLAHAER 163
            +       D  +   A SL+K R G E VAD VN IS I+ +++L  +RL G KL H + 
Sbjct: 870  DQPESSEADTDLLDSATSLSKWRTGSEAVADLVNYISSIVHAINLPGARLGGSKLTHVKE 929

Query: 162  VILNTELLFGNKFRLNSDETKRFSIRHFIVNELETLGSVLWTNFGCFSESED 7
            VILN ELLFGN    NSD  + F + HF+V ELETL    WT    F   ED
Sbjct: 930  VILNAELLFGNAALANSDGCRSF-LGHFLVAELETLTCATWTKSDIFPGFED 980



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
 Frame = -3

Query: 987  RNITRTDSSLARLGETKKGSDINN--GVVSFTFSSSKKQKDRMLAESHD-RGYQSECTCS 817
            +N T   +++A L E+  G+ +N    V+SFTF+S  + K  MLAE  + R  +S+  C+
Sbjct: 542  KNQTCVKNAVASLRESD-GAHVNKEIDVISFTFNSPMRNKTGMLAEMGEKRRDRSDVICN 600

Query: 816  NSSQ-KNSILDEIHKYESACSYKSYASTGDTLGVLLEQKLKELSSQEDIQMALGGSSLNQ 640
            ++S+ +  ILDE +  ++    KS+    D LG  L +KLKEL+S E+ +++ GG+   +
Sbjct: 601  STSRPRKLILDEDNGKKAF--QKSFPLRXDALGAFLGKKLKELASAEEDELSAGGTLTKR 658

Query: 639  RSAIILQELISALTVQRSFHVNDVVVRPTEIGGSSCCVHTSTAHPPFQAHQNK 481
              A+ILQELISALT ++     D  VR  +    + C    + H     H +K
Sbjct: 659  CPAMILQELISALTEEKPVSQYDGAVRINQNDNLTYCNKDPSDHVCSNGHMSK 711


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