BLASTX nr result

ID: Bupleurum21_contig00024192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024192
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37705.3| unnamed protein product [Vitis vinifera]              204   1e-50
ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Viti...   204   1e-50
ref|XP_002328151.1| histone deacetylase [Populus trichocarpa] gi...   203   2e-50
ref|XP_002531796.1| histone deacetylase 1, 2 ,3, putative [Ricin...   200   2e-49
ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Viti...   199   3e-49

>emb|CBI37705.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  204 bits (519), Expect = 1e-50
 Identities = 107/187 (57%), Positives = 123/187 (65%), Gaps = 1/187 (0%)
 Frame = -3

Query: 689 TIRNVARCWCYETGVALGTEIEDKMPQHEYYEYFGPDYNLHVAPSNMENKNSHKILDDIR 510
           TIRNVARCWCYETGVALG E++DKMPQHEYYEYFGPDY LHVAPSNMENKNSH+ILD+IR
Sbjct: 204 TIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSHQILDEIR 263

Query: 509 IKVLDNLSKLQHAPSVPFQXXXXXXXXXXXXXDQYDKDERLDPKADMDVDEQSMPFSGRV 330
            K+LDNLSKL+HAPSV FQ             D  D DER DP++DM+VDE+  P   RV
Sbjct: 264 AKLLDNLSKLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPESDMEVDEEHKPLPSRV 323

Query: 329 KREILEPEHKDVVDDVREGEHTKDMDATFTEASFPTVTIPNSALTAEPIVS-EQGNSNKS 153
           KREI+EPE KD  D     EH++  D    E +    +        EP V  EQ N NK 
Sbjct: 324 KREIVEPEAKDSDDKKGVAEHSRGFDTAAEETACSKASDVCPMPIDEPNVKVEQENLNKP 383

Query: 152 SQEHTDM 132
             +   M
Sbjct: 384 FDQPVQM 390


>ref|XP_002283371.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
          Length = 502

 Score =  204 bits (519), Expect = 1e-50
 Identities = 107/187 (57%), Positives = 123/187 (65%), Gaps = 1/187 (0%)
 Frame = -3

Query: 689 TIRNVARCWCYETGVALGTEIEDKMPQHEYYEYFGPDYNLHVAPSNMENKNSHKILDDIR 510
           TIRNVARCWCYETGVALG E++DKMPQHEYYEYFGPDY LHVAPSNMENKNSH+ILD+IR
Sbjct: 312 TIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSHQILDEIR 371

Query: 509 IKVLDNLSKLQHAPSVPFQXXXXXXXXXXXXXDQYDKDERLDPKADMDVDEQSMPFSGRV 330
            K+LDNLSKL+HAPSV FQ             D  D DER DP++DM+VDE+  P   RV
Sbjct: 372 AKLLDNLSKLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPESDMEVDEEHKPLPSRV 431

Query: 329 KREILEPEHKDVVDDVREGEHTKDMDATFTEASFPTVTIPNSALTAEPIVS-EQGNSNKS 153
           KREI+EPE KD  D     EH++  D    E +    +        EP V  EQ N NK 
Sbjct: 432 KREIVEPEAKDSDDKKGVAEHSRGFDTAAEETACSKASDVCPMPIDEPNVKVEQENLNKP 491

Query: 152 SQEHTDM 132
             +   M
Sbjct: 492 FDQPVQM 498


>ref|XP_002328151.1| histone deacetylase [Populus trichocarpa]
           gi|222837666|gb|EEE76031.1| histone deacetylase [Populus
           trichocarpa]
          Length = 501

 Score =  203 bits (517), Expect = 2e-50
 Identities = 103/183 (56%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
 Frame = -3

Query: 689 TIRNVARCWCYETGVALGTEIEDKMPQHEYYEYFGPDYNLHVAPSNMENKNSHKILDDIR 510
           TIRNVARCWCYETGVALG E++DKMPQHEYYEYFGPDY LHVAPSNMENKNSH++L++IR
Sbjct: 313 TIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSHQVLEEIR 372

Query: 509 IKVLDNLSKLQHAPSVPFQXXXXXXXXXXXXXDQYDKDERLDPKADMDVDEQSMPFSGRV 330
            K+LDNLSKLQHAPSV FQ             +Q + DER DP +DMDVDE+  P  GRV
Sbjct: 373 CKLLDNLSKLQHAPSVQFQERVPDTELPEAEEEQNEADERWDPDSDMDVDEERKPLPGRV 432

Query: 329 KREILEPEHKDVVDDVREGEHTKDMDATFTE-ASFPTVTIPNSALTAEPIVSEQGNSNKS 153
           KREI+E E K+         H +  D T  E AS   +      +    +  EQ N NK+
Sbjct: 433 KREIVEAEPKESEGQKGSSGHARGFDTTIAENASGKALDAGPKQIDEAGVRVEQENVNKA 492

Query: 152 SQE 144
           S +
Sbjct: 493 SSD 495


>ref|XP_002531796.1| histone deacetylase 1, 2 ,3, putative [Ricinus communis]
           gi|223528562|gb|EEF30584.1| histone deacetylase 1, 2 ,3,
           putative [Ricinus communis]
          Length = 455

 Score =  200 bits (509), Expect = 2e-49
 Identities = 102/183 (55%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
 Frame = -3

Query: 689 TIRNVARCWCYETGVALGTEIEDKMPQHEYYEYFGPDYNLHVAPSNMENKNSHKILDDIR 510
           TIRNVARCWCYETGVALG +++DKMPQHEYYEYFGPDY LHVAPSNMENKNSH +LD+IR
Sbjct: 268 TIRNVARCWCYETGVALGMDVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSHPLLDEIR 327

Query: 509 IKVLDNLSKLQHAPSVPFQXXXXXXXXXXXXXDQYDKDERLDPKADMDVDEQSMPFSGRV 330
            K+LD LSKLQHAPS+ FQ             DQ D DER DP +DMDVD++  P   RV
Sbjct: 328 SKLLDYLSKLQHAPSIQFQERPPNTDIPEADEDQDDGDERWDPDSDMDVDDERKPLPSRV 387

Query: 329 KREILEPEHKDVVDDVREGEHTKDMDATFTE-ASFPTVTIPNSALTAEPIVSEQGNSNKS 153
           KREILE E KD+       +H +  + T  E AS   + I    +    +  EQ N NK+
Sbjct: 388 KREILEAEPKDLESQKGIADHARGFETTADESASAKALDIGAMQIDEPSVKVEQDNMNKT 447

Query: 152 SQE 144
           + +
Sbjct: 448 TDQ 450


>ref|XP_003633720.1| PREDICTED: histone deacetylase 19-like [Vitis vinifera]
           gi|296087188|emb|CBI33562.3| unnamed protein product
           [Vitis vinifera]
          Length = 502

 Score =  199 bits (507), Expect = 3e-49
 Identities = 102/179 (56%), Positives = 121/179 (67%), Gaps = 1/179 (0%)
 Frame = -3

Query: 689 TIRNVARCWCYETGVALGTEIEDKMPQHEYYEYFGPDYNLHVAPSNMENKNSHKILDDIR 510
           TIRNVARCWCYETGVALG E++DKMPQHEYYEYFGPDY LHVAPSNMENKNSH++LD+IR
Sbjct: 312 TIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSHQLLDEIR 371

Query: 509 IKVLDNLSKLQHAPSVPFQXXXXXXXXXXXXXDQYDKDERLDPKADMDVDEQSMPFSGRV 330
            K+LDNLS L+HAPSV FQ             D  D DER DP +DM++D++     GRV
Sbjct: 372 AKLLDNLSTLRHAPSVQFQERPPDTELPEADEDHDDGDERWDPDSDMEIDDERKSLPGRV 431

Query: 329 KREILEPEHKDVVDDVREGEHTKDMDATFTEASFPTVTIPNSALTAEPIVS-EQGNSNK 156
           KREI+EPE KD+ D     EH++  D T  E +    +        EP V  EQ + NK
Sbjct: 432 KREIVEPESKDLEDKKGVAEHSRGFDTTAEETACSKASDVCPMPIDEPSVKVEQESLNK 490


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