BLASTX nr result

ID: Bupleurum21_contig00024190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024190
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510105.1| protein with unknown function [Ricinus commu...   251   6e-65
ref|XP_003634430.1| PREDICTED: uncharacterized protein LOC100854...   250   2e-64
emb|CBI19410.3| unnamed protein product [Vitis vinifera]              250   2e-64
ref|XP_002320692.1| predicted protein [Populus trichocarpa] gi|2...   241   8e-62
ref|NP_001077611.1| Ubiquitin system component Cue protein [Arab...   237   2e-60

>ref|XP_002510105.1| protein with unknown function [Ricinus communis]
            gi|223550806|gb|EEF52292.1| protein with unknown function
            [Ricinus communis]
          Length = 2020

 Score =  251 bits (642), Expect = 6e-65
 Identities = 129/211 (61%), Positives = 163/211 (77%), Gaps = 1/211 (0%)
 Frame = -1

Query: 630  LSRRVYMVLYRISSNRDPGAKVANSLSPKDHAVXXXXXXXXXXXXXLDICAIYGHENEDL 451
            LSRRV+MVLYRISSNRDPGA+ A+SLS +DHA              LDICAIYGHENE+L
Sbjct: 1318 LSRRVFMVLYRISSNRDPGARAADSLSSRDHAALLQDKKLLDLPKLLDICAIYGHENEEL 1377

Query: 450  TRLLVANSVKAQPRIHDDFSAVLNQFLNIAHTMYQRCTSSLEVLFSNHDSQDHGSKHLHT 271
            TRLLV N+++AQP IH++ +AV++ F+ I HTMYQRC +SLE LFS+   +D  S  LH+
Sbjct: 1378 TRLLVENALQAQPGIHNNLAAVVSHFMGIIHTMYQRCIASLEALFSSGSFRDADSGSLHS 1437

Query: 270  DYLEVMDFLNDAIISMDAFVGAYKHAAIFFSCPIETSYGNEELINTLARLHDSLLPSLKR 91
            D+LEVMDF+NDAI+S+DAFV AYK AA+FFSCP+E S+GNEEL+ TLARLHD+LLPSL+R
Sbjct: 1438 DFLEVMDFINDAIVSLDAFVNAYKPAAVFFSCPVEMSHGNEELLITLARLHDTLLPSLQR 1497

Query: 90   GFQ-LLFNSEEGRRDISADLTSNIAVSLNML 1
            GF+ +L   ++G       + SN+AVSL ML
Sbjct: 1498 GFRIILAGGDDG-------VISNVAVSLKML 1521


>ref|XP_003634430.1| PREDICTED: uncharacterized protein LOC100854438 [Vitis vinifera]
          Length = 866

 Score =  250 bits (638), Expect = 2e-64
 Identities = 126/210 (60%), Positives = 163/210 (77%)
 Frame = -1

Query: 630 LSRRVYMVLYRISSNRDPGAKVANSLSPKDHAVXXXXXXXXXXXXXLDICAIYGHENEDL 451
           LSRRV+MVL+RISSNRDPGA+  ++LS KDHAV             LDICAIYG ENEDL
Sbjct: 163 LSRRVFMVLFRISSNRDPGARAVDTLSSKDHAVLLQEKRLLDLPRLLDICAIYGCENEDL 222

Query: 450 TRLLVANSVKAQPRIHDDFSAVLNQFLNIAHTMYQRCTSSLEVLFSNHDSQDHGSKHLHT 271
           TR LV N++KAQP IHD+  AV++ FL+I HTM+QRC+SSLE LFS+   +D GS  L++
Sbjct: 223 TRSLVVNALKAQPWIHDNLIAVMSHFLSIVHTMHQRCSSSLEALFSSGGYEDQGSIQLYS 282

Query: 270 DYLEVMDFLNDAIISMDAFVGAYKHAAIFFSCPIETSYGNEELINTLARLHDSLLPSLKR 91
           D+LEVMDF+NDAI+S+DAFV AYK AA+FFSCP+E SYGNEEL++TLARL++SLLPS+++
Sbjct: 283 DFLEVMDFINDAIVSLDAFVHAYKPAAVFFSCPVEMSYGNEELLHTLARLYNSLLPSIQQ 342

Query: 90  GFQLLFNSEEGRRDISADLTSNIAVSLNML 1
           GFQ+LF + +  +       S+IA+ L M+
Sbjct: 343 GFQILFTAGDVLQKSFGITLSDIAICLKMV 372


>emb|CBI19410.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  250 bits (638), Expect = 2e-64
 Identities = 126/210 (60%), Positives = 163/210 (77%)
 Frame = -1

Query: 630 LSRRVYMVLYRISSNRDPGAKVANSLSPKDHAVXXXXXXXXXXXXXLDICAIYGHENEDL 451
           LSRRV+MVL+RISSNRDPGA+  ++LS KDHAV             LDICAIYG ENEDL
Sbjct: 179 LSRRVFMVLFRISSNRDPGARAVDTLSSKDHAVLLQEKRLLDLPRLLDICAIYGCENEDL 238

Query: 450 TRLLVANSVKAQPRIHDDFSAVLNQFLNIAHTMYQRCTSSLEVLFSNHDSQDHGSKHLHT 271
           TR LV N++KAQP IHD+  AV++ FL+I HTM+QRC+SSLE LFS+   +D GS  L++
Sbjct: 239 TRSLVVNALKAQPWIHDNLIAVMSHFLSIVHTMHQRCSSSLEALFSSGGYEDQGSIQLYS 298

Query: 270 DYLEVMDFLNDAIISMDAFVGAYKHAAIFFSCPIETSYGNEELINTLARLHDSLLPSLKR 91
           D+LEVMDF+NDAI+S+DAFV AYK AA+FFSCP+E SYGNEEL++TLARL++SLLPS+++
Sbjct: 299 DFLEVMDFINDAIVSLDAFVHAYKPAAVFFSCPVEMSYGNEELLHTLARLYNSLLPSIQQ 358

Query: 90  GFQLLFNSEEGRRDISADLTSNIAVSLNML 1
           GFQ+LF + +  +       S+IA+ L M+
Sbjct: 359 GFQILFTAGDVLQKSFGITLSDIAICLKMV 388


>ref|XP_002320692.1| predicted protein [Populus trichocarpa] gi|222861465|gb|EEE99007.1|
            predicted protein [Populus trichocarpa]
          Length = 1944

 Score =  241 bits (615), Expect = 8e-62
 Identities = 123/210 (58%), Positives = 154/210 (73%)
 Frame = -1

Query: 630  LSRRVYMVLYRISSNRDPGAKVANSLSPKDHAVXXXXXXXXXXXXXLDICAIYGHENEDL 451
            L RRV+MVLYRISSNR PG + A SL+ KDHAV             LDIC+IYGHENE+L
Sbjct: 1248 LCRRVFMVLYRISSNRAPGVEAAESLNSKDHAVLLQEKKLLDLPKLLDICSIYGHENEEL 1307

Query: 450  TRLLVANSVKAQPRIHDDFSAVLNQFLNIAHTMYQRCTSSLEVLFSNHDSQDHGSKHLHT 271
            T LLV N++KAQP +HDD + ++  FL I HTM+QRC SSLEVL S    +DH S  L T
Sbjct: 1308 TGLLVKNALKAQPWLHDDLANLMTHFLGIIHTMHQRCMSSLEVLLSAGSHEDHRSSPLLT 1367

Query: 270  DYLEVMDFLNDAIISMDAFVGAYKHAAIFFSCPIETSYGNEELINTLARLHDSLLPSLKR 91
            DYLEVMDF+NDAI+SMDAFV AY+ AA+FFSCP+E S+GNEE++ TLARLHD+L+P+L+R
Sbjct: 1368 DYLEVMDFINDAIVSMDAFVTAYESAAVFFSCPVEMSHGNEEMLITLARLHDTLIPALQR 1427

Query: 90   GFQLLFNSEEGRRDISADLTSNIAVSLNML 1
            GF+++    + R      +  N+AVSL ML
Sbjct: 1428 GFRVILTGGDDR------MILNVAVSLKML 1451


>ref|NP_001077611.1| Ubiquitin system component Cue protein [Arabidopsis thaliana]
           gi|332192752|gb|AEE30873.1| Ubiquitin system component
           Cue protein [Arabidopsis thaliana]
          Length = 873

 Score =  237 bits (604), Expect = 2e-60
 Identities = 119/210 (56%), Positives = 151/210 (71%)
 Frame = -1

Query: 630 LSRRVYMVLYRISSNRDPGAKVANSLSPKDHAVXXXXXXXXXXXXXLDICAIYGHENEDL 451
           L RRV+MVLYRISSNRDPGAK A+SLS KDH V             LDICAIYGHEN +L
Sbjct: 184 LCRRVFMVLYRISSNRDPGAKAADSLSQKDHEVLLQDKKLLDLPKLLDICAIYGHENAEL 243

Query: 450 TRLLVANSVKAQPRIHDDFSAVLNQFLNIAHTMYQRCTSSLEVLFSNHDSQDHGSKHLHT 271
           T+ L+ N+VK+Q  I +  + +L+ FL I HTM+ RCTSSLE L S+ +S+DHG + LH+
Sbjct: 244 TKSLIENAVKSQNGISESLNMMLSHFLGILHTMHHRCTSSLETLVSSANSEDHGRRQLHS 303

Query: 270 DYLEVMDFLNDAIISMDAFVGAYKHAAIFFSCPIETSYGNEELINTLARLHDSLLPSLKR 91
           D LEVMDF+ND ++S+DAF+ AY  A    +CP+ETSYG++EL+ +L RLHDSLLPSL R
Sbjct: 304 DLLEVMDFINDGVVSLDAFISAYTPAVFILACPVETSYGSDELLRSLVRLHDSLLPSLHR 363

Query: 90  GFQLLFNSEEGRRDISADLTSNIAVSLNML 1
           GFQ+LF  E+       D  S+I+ SLNML
Sbjct: 364 GFQVLFKDED------HDSLSDISTSLNML 387


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