BLASTX nr result

ID: Bupleurum21_contig00024179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024179
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002530231.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002312505.1| predicted protein [Populus trichocarpa] gi|222852325|gb|EEE89872.1|
           predicted protein [Populus trichocarpa]
          Length = 721

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
 Frame = -3

Query: 344 GAEEKVKLSLGQSSL-----QSETEEGLIGDETMEDHEPEAYEQTEGYYDYEQADGEDYN 180
           G EE ++++ GQSS      + ETE+G+I D+ MEDHE E  +Q +  Y+YEQ D  +YN
Sbjct: 631 GTEENIEIAHGQSSQLPNPSEIETEDGMIADDGMEDHEYEGDDQRDDNYEYEQVDEGEYN 690

Query: 179 LEEGENLDPXXXXXXXXXXXXDFAKKMGVNFS 84
            EEGEN+D             DFAKK+GV  S
Sbjct: 691 YEEGENID-GEEEYEDEEDGEDFAKKIGVVIS 721


>ref|XP_002314739.1| predicted protein [Populus trichocarpa] gi|222863779|gb|EEF00910.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/70 (52%), Positives = 46/70 (65%)
 Frame = -3

Query: 293 ETEEGLIGDETMEDHEPEAYEQTEGYYDYEQADGEDYNLEEGENLDPXXXXXXXXXXXXD 114
           ETE+G+I D+ MEDHE E  +Q +G Y+YEQAD  +YN EEGEN+D             D
Sbjct: 669 ETEDGMIADDGMEDHEYEGDDQRDGDYEYEQADEGEYNYEEGENID---EEEYENEDGDD 725

Query: 113 FAKKMGVNFS 84
           FAKK+GV FS
Sbjct: 726 FAKKIGVVFS 735


>ref|XP_002530231.1| conserved hypothetical protein [Ricinus communis]
           gi|223530235|gb|EEF32137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 591

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
 Frame = -3

Query: 341 AEEKVKLSLGQSSL-----QSETEEGLIGDETMEDHEPEAYEQTEGYYDYEQADGEDYNL 177
           A E  ++ LGQ S      + ETE+G+I D+ +E+ E E  +Q EG Y+YEQ D  +Y  
Sbjct: 505 AVENTEVDLGQCSQLPNQSEPETEDGMIVDDGVEEEEYEVDDQGEGDYEYEQGDEGEY-Y 563

Query: 176 EEGENLDPXXXXXXXXXXXXDFAKKMGVNFS 84
           EEGEN +             +FAKK+GV F+
Sbjct: 564 EEGENAE---GEEEYVDENEEFAKKLGVVFT 591


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